Wheelodex » Projects » basematic

basematic

View on PyPI — Reverse Dependencies (0)

0.1.2 basematic-0.1.2-py2.py3-none-any.whl

Wheel Details

Project: basematic
Version: 0.1.2
Filename: basematic-0.1.2-py2.py3-none-any.whl
Download: [link]
Size: 34592
MD5: c4926d4c8b36301ac690560047eb8457
SHA256: d3eae58ef1cbfbf510d11c827ac3f0b588e5c10c813eb902f717a75e0894c092
Uploaded: 2018-04-23 04:25:52 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.0
Name: basematic
Version: 0.1.2
Summary: Tools For Bioinformatics
Author: Xiannian Zhang
Author-Email: friedpine[at]gmail.com
Home-Page: https://gene.pku.edu.cn
Keywords: sample setuptools development
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Developers
Classifier: Topic :: Software Development :: Build Tools
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3.6
Requires-Dist: click
Requires-Dist: configparser
Requires-Dist: jinja2
Requires-Dist: matplotlib
Requires-Dist: numpy
Requires-Dist: pandas
Requires-Dist: check-manifest; extra == "dev"
Requires-Dist: coverage; extra == "test"
Provides-Extra: dev
Provides-Extra: test
[Description omitted; length: 1696 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.29.0)
Root-Is-Purelib: true
Tag: py2-none-any
Tag: py3-none-any

RECORD

Path Digest Size
basematic/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
basematic/cmd.py sha256=wGhbxDO3mXQLoJRBwsn9g_yKNQ7SA6ZCFu-p9xlmAE0 1759
basematic/setting.py sha256=PAM6RRjTShnMb11TlNWrh2-X7Dr_QfSB2WYqpdQ8Xzs 471
basematic/bio/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
basematic/bio/bam/__init__.py sha256=TlgZ5ME5XFG8omDrvXc2335Rykmc7koIBV9qrVP8j6c 538
basematic/bio/bam/read.py sha256=BRO1zaPNfb7ZNSyEyEIIlI7JPwokC0lBcSTtbJYyiUw 341
basematic/bio/bam/stats.py sha256=I_LoIFeyohIvNINgpfK-sV-LsndkhHm3sNJew6O9v4w 143
basematic/bio/bed/__init__.py sha256=mDCJai4Pbsobjp0jb85Y841W1bRudGeRNof1eyBddP0 84
basematic/bio/cnv/__init__.py sha256=Mx0lrOA9m3d_mC0INB63BX15XE3-diFfnlphoTAvknI 1615
basematic/bio/cnv/align.py sha256=_rQLFo3wmEv_edYZc1WOe6SzUL3bEXh6he9nPk_FlpQ 1146
basematic/bio/cnv/bin_count.py sha256=WLcabR61PJmlh2jop4s0TOFGtj5KHSi9_R82yzZV_Pk 1975
basematic/bio/cnv/cbs.py sha256=LIWxnDAxpmCSE1L9gPK57lxsBglBDh5pQaXXwQDioBY 410
basematic/bio/cnv/normalize.py sha256=AoSiAvOQQD4W4lKtKuv7uCJkMjq8d0RK1LugkUQWJtg 636
basematic/bio/dropseq/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
basematic/bio/fastq/Files.py sha256=LYuBs8OSUXyVdozvrlIKKWby0W7v-lb_ggDxgrcYm1c 1806
basematic/bio/fastq/Stats.py sha256=s392outRJa4bcGY5hBmlpHvRgRnjHfv1SUuveo02sWw 1039
basematic/bio/fastq/__init__.py sha256=uCyNeAI783DNxuCxkXN7s6Ef5WN8W3_ZahCPrQK8k9M 1767
basematic/bio/resource/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
basematic/bio/resource/gene_infos.py sha256=RZUARw8JnRNV9p32Vl9cPtZcZb_8pzxGK0F-51GWE8g 2616
basematic/bio/resource/gene_rifs.py sha256=5L6RxvREGCgsJjul69mc_TEc3a-HGuef0i7jHnu6680 1232
basematic/bio/rnaseq/DESeq2.py sha256=OLCu7XSHn6UeXano3RMnT78H2W-3sr4bxwQcN7UNSgo 2172
basematic/bio/rnaseq/__init__.py sha256=zihot5GZJsYLHM29d1cbRDHElnY4zwELrpPYleBHeq0 1246
basematic/bio/rnaseq/barcode.py sha256=1dH4-uBgz3VWv5Aa9OUqmNtyS2wt0dEGyH7LCLHpqXc 1823
basematic/bio/rnaseq/barcode_stats.py sha256=2CH86rVAD2KcNpPHy6QiQfQb0V46byjwiU8hMH2NQ-A 3341
basematic/bio/rnaseq/reads_tagging.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
basematic/bio/snv/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
basematic/bio/snv/_cmd.py sha256=eckRQQHEqH5C9KOqPEXq8HhHDU4wrDTXG-RclI7b0GQ 4339
basematic/bio/snv/annovar.py sha256=d_VQAUL7dL0rg6AFEaHNXB_mtDk-49jV5FWSte4L4-g 1390
basematic/bio/snv/gatk.py sha256=0f2qckBPGw9I_oFug2t4aVZWvQKOFdipkUZ-JWvjTsQ 444
basematic/bio/snv/pipe.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
basematic/bio/snv/quality.py sha256=bVxMcHLl6E9noUKTsSAxbUJPpaMWP1oZV2_GhJ9uK4g 2126
basematic/bio/snv/vcf.py sha256=DyEF26v-tDWPFxJtqZ8BThsrqBJtLYwWe0M8ZVp6Pns 1128
basematic/exec/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
basematic/exec/bash.py sha256=-rYRc1AadVjmnrw9_ArcasX7du-7IPhXO2oNeMtQUos 1022
basematic/file/DataBase.py sha256=2mOeMcgLwLbzZF4k1DDj00_J6joIsWvveTK89ox9PB4 2711
basematic/file/Folder.py sha256=_iuIH7-6PhsFJ84hM5WY2-L46H907cWHCNU8esiCS9I 1655
basematic/file/Read.py sha256=s_u0akD03wT-ckZzs0LvPMfaMdPzCGllVF03BOfpoBo 1413
basematic/file/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
basematic/mgt/__init__.py sha256=C9uYZNx0kdlr0xtCEF2PYz3bMpsEmWvMizGQ8NX77uI 59
basematic/mgt/_cmd.py sha256=A_Nu30Pue1Au0zTU4bfZsQU1KZ5oSJG6l7gTAgHGQX0 1489
basematic/mgt/check.py sha256=-m5nWD8uC8UsI644Rm2T7QPeIFoZJ5aOhApWwnuE5Iw 643
basematic/mgt/command.py sha256=GFxsBwE2h3FMMqJvrSpExOwmkRBE5qqpuaBtjaXo2fg 273
basematic/mgt/config.py sha256=FyyFdNWPWryrTW1fyGvcWagAWUf2LXgwUVojt3m4f7M 1502
basematic/mgt/jobs.py sha256=sS55iPbOXonD4-RIFhOQ1hHnRc1sqEoNCjAqEKRUpRI 1034
basematic/mgt/resource.py sha256=g7Q8weJIxtMbu_J6Y0GyPXJox9oSAAp2_8dviY7bug4 2081
basematic/server/SimpleHttp.py sha256=V2Ud6ysmdQXlqZEbvtQojQ32gCXomRlf1C7PkDEfeHc 7966
basematic/server/__init__.py sha256=J0vLbzonOcjYWoHVyJwzedIaXCHvJCqghIQqiZJtkJE 180
basematic/src/__init__.py sha256=VZgMz2gWzJKC1lYl_7Fy7HwjyU3FyW2bqXiBEl1-7DI 86
basematic/utils/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
basematic/utils/clean.py sha256=AR9XU4yUY30ViD4-nzMZsFGisXCxqaDz98LVhGWuy1s 113
basematic-0.1.2.dist-info/DESCRIPTION.rst sha256=J5m7AN18TXkUBCCpOF6EAkwtVerr4mNCbEI-yE3on2M 1700
basematic-0.1.2.dist-info/METADATA sha256=XRlAvvVs9lSRYNXRDaWgJHbgm0DmAbAV65WTUOOJ0fE 2469
basematic-0.1.2.dist-info/RECORD — —
basematic-0.1.2.dist-info/WHEEL sha256=o2k-Qa-RMNIJmUdIc7KU6VWR_ErNRbWNlxDIpl7lm34 110
basematic-0.1.2.dist-info/entry_points.txt sha256=hXo6DjGehXIRhJvp7vqTKPHvOyee9t13rwEm8oMILGc 288
basematic-0.1.2.dist-info/metadata.json sha256=5VgEcV08K-Y3sMMbZ5wycv8FPQYETlEcKGK5W3o2wXc 1548
basematic-0.1.2.dist-info/top_level.txt sha256=2vz3Rpb3VXimyVqCQKLgaJLXKXlqz74Mthi5RF1KvIg 10

top_level.txt

basematic

entry_points.txt

[console_scripts]
basematic = basematic.cmd:cli
basematic-BAM = basematic.bio.bam:cli
basematic-CNV = basematic.bio.cnv:cli
basematic-RNA = basematic.bio.rnaseq:cli
basematic-SNV = basematic.bio.snv._cmd:cli
basematic-fastq = basematic.bio.fastq:cli
basematic-manage = basematic.mgt:cli