Reverse Dependencies of cdis_pipe_utils

The following projects have a declared dependency on cdis_pipe_utils:

• bam_add_eof — if a BAM is missing EOF, add it, else output original BAM
• bamutil_tool — call bamutil tools and store time/mem metrics in sqlitedb
• biobambam_tool — call biobambam tools and store time/mem metrics in sqlitedb
• bwa_se_tool — map SE fastq reads to a reference genome with bwa
• bwa_tool — map PE fastq reads to a reference genome with bwa
• fastqc_sqlite — store FastQC data/summary in sqlitedb
• fastqc_tool — call fastqc tools and store time/mem metrics in sqlitedb
• readgroup_platform_insertion — Insert a PL:<value> in @RGs in a BAM header
• remove_duplicate_fastq_matepair — Remove duplicate mate pairs from a FASTQ
• remove_qcfailed_mapped — call remove_qcfailed_mapped and store time/mem metrics in sqlitedb
• samtools_tool — call samtools tools and store time/mem metrics in sqlitedb
• sra_hs_lookup — call remove_qcfailed_mapped and store time/mem metrics in sqlitedb