Wheelodex » Projects » cell2location

cell2location

View on PyPI — Reverse Dependencies (3)

0.6a0 cell2location-0.6a0-py3-none-any.whl

Wheel Details

Project: cell2location
Version: 0.6a0
Filename: cell2location-0.6a0-py3-none-any.whl
Download: [link]
Size: 179041
MD5: b46f41c4320ecc2913f85d1fe27022e1
SHA256: d2f4103119ef319ceaedd6ecbe9ebe1c37bdd240b5b77fd89db603dfde879b97
Uploaded: 2021-09-02 15:12:16 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt

METADATA

Metadata-Version: 2.1
Name: cell2location
Version: 0.6a0
Summary: cell2location: High-throughput spatial mapping of cell types
Author: Vitalii Kleshchevnikov, Artem Shmatko, Emma Dann, Artem Lomakin, Alexander Aivazidis
Author-Email: vitalii.kleshchevnikov[at]sanger.ac.uk
Home-Page: https://github.com/BayraktarLab/cell2location
License: Apache License, Version 2.0
Requires-Dist: pyro-ppl (>=1.7.0)
Requires-Dist: scvi-tools (>=0.12.2)
Requires-Dist: torch (>=1.9.0)
Requires-Dist: pymc3 (>=3.8<3.10)
Requires-Dist: arviz (==0.10.0)
Requires-Dist: numpy
Requires-Dist: pandas
Requires-Dist: scanpy
Requires-Dist: plotnine
Requires-Dist: black (>=21.4b0); extra == "dev"
Requires-Dist: flake8; extra == "dev"
Requires-Dist: pytest (>=5.0); extra == "dev"
Requires-Dist: pytest-cov; extra == "dev"
Requires-Dist: isort; extra == "dev"
Requires-Dist: pre-commit; extra == "dev"
Requires-Dist: sphinx (==3.2.1); extra == "docs"
Requires-Dist: nbsphinx (==0.8.7); extra == "docs"
Requires-Dist: sphinx-rtd-theme (==0.5.2); extra == "docs"
Requires-Dist: leidenalg (>=0.8.0); extra == "tutorials"
Requires-Dist: python-igraph; extra == "tutorials"
Provides-Extra: dev
Provides-Extra: docs
Provides-Extra: tutorials
Description-Content-Type: text/markdown
[Description omitted; length: 15214 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.35.1)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
cell2location/__init__.py sha256=m54ZNYZ_P_ndC0luhZznebYlP_7DyOPI1CMXSSeWpyI 529
cell2location/run_c2l.py sha256=5fVqaBmzGbbRynN6NBSOhXstGfpdXeUAZFdYHoX461Y 39567
cell2location/run_colocation.py sha256=jaEinLIOyENeCASzRggudxW8WLFRH5HuPUv7w17svUo 17838
cell2location/run_regression.py sha256=DGBFOF58BuUknQyYvFiCpkmDXylqmQ1WnWK00hc3DGQ 17461
cell2location/cluster_averages/__init__.py sha256=jOZ6vyhZC8A25GmNWtVwoWv4eTGV9n22Uks_pT0TS_s 211
cell2location/cluster_averages/cluster_averages.py sha256=PfszeAOOzmJmhnpEr72nRo_5x-oqUppGhDMTaqkgiw0 4058
cell2location/cluster_averages/markers_by_hierarhy.py sha256=EXLp19TSr4mQVd-DP1UPHEsaB8rwbldeHisGzeXaHIc 7603
cell2location/cluster_averages/select_features.py sha256=dZ_fDj-N2yqXZbxULYajob1o2Dc-yb5yKESCNr4Og4E 1329
cell2location/distributions/AutoNormalEncoder.py sha256=RLrzLQyoSXXp67hCNqq15PoVR66z27706E5hNMtm75c 16870
cell2location/distributions/Gamma.py sha256=z6IeN6bBotbNvpP1S_U3WrgDz8gSG1dNYbtX0a3GNko 834
cell2location/distributions/NegativeBinomial.py sha256=qRR1UjI--JTC08N0hd2j2dC67Gz90OugFfk3yzu71q0 6231
cell2location/distributions/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cell2location/distributions/transforms.py sha256=LFR7VDz8_A-ugr6lDWMCpne5mX-WB5OtcT_YkFCdANw 586
cell2location/models/README.md sha256=mQtV0A1vW5On3pD2JQFw0VMkNBkCuBFBGuATIngFh2o 1765
cell2location/models/__init__.py sha256=Qs6bBQ4db43StxbiMaUqZSZanESi2jk0vdh9vzund3I 569
cell2location/models/_cell2location_model.py sha256=IU8nj8PREqUe9cRPbm0HxK02hsDaPsdTRs6U4CZ2UoI 12943
cell2location/models/_cell2location_module.py sha256=WBWKjJPzceX78kj2H4-EF46FefcUKOb46wv1eivcXMk 20184
cell2location/models/base/__init__.py sha256=A-NS_SndGrNQCte8cYtM7Yh3uogstZNUOiTOVvCltVQ 100
cell2location/models/base/_pyro_base_loc_module.py sha256=pYDA72LJ93-kvyMG5GBNcuRqEhHK8agGaNSTKOpt9pk 2367
cell2location/models/base/_pyro_base_reference_module.py sha256=YgkYhz4CsnfcKg5Y584iMSate1hq-U7AgYlf3C2uiZE 2389
cell2location/models/base/_pyro_mixin.py sha256=yrACBPe7AKcP3NTxb3weMEMUGOE96dQNN0Uci_BxCO0 17384
cell2location/models/base/base_model.py sha256=ENiyB-wGSiPz5VJSbq6UjDlD-BQzsneFP6ftNI09epQ 20633
cell2location/models/base/pymc3_loc_model.py sha256=R77ufoJ9V1s_zgegAS17sg73ktVL8ASjZoeKdEkWv3Y 9937
cell2location/models/base/pymc3_model.py sha256=IZUsVyfJZrak5YIVaD5FdmsjdhU6vs03npTZL6OJjZM 35382
cell2location/models/base/regression_torch_model.py sha256=P5OFbxMWaP6AHyaGRyu5tR9wTHMW2qDir5ldN5taSgs 8540
cell2location/models/base/torch_model.py sha256=4EMmAXIRj88aIOry29BWrTVk7YaWOHC2FyFmNJRMEI4 16124
cell2location/models/downstream/ArchetypalAnalysis.py sha256=kVphUGUUtu98jNCSSJ7cedzkURsAkRvebEmeXnjvQFE 12007
cell2location/models/downstream/CoLocatedGroupsSklearnNMF.py sha256=pfF0gA9QgeQuCNnZ2koi-rd_vtGEC5qFUlgKM1oYHbc 13344
cell2location/models/downstream/__init__.py sha256=_V1ksAcBp0QZOazgts3GitDPxotO_DYy-ljh4DxIth8 179
cell2location/models/pymc3/LocationModelLinearDependentWMultiExperimentLocationBackgroundNormGeneAlpha.py sha256=tuvmvZXs2efchVQVWZlctIE20hL8R7xhbdTQfwiM82M 19375
cell2location/models/pymc3/LocationModelWTA.py sha256=f6_bPh80OxxLq4XSnVseF5zPh2XHx8tUArDwbkoHQ54 24880
cell2location/models/pymc3/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cell2location/models/pymc3/simplified/LocationModelHierarchicalW.py sha256=z_5cxrdVhpJoLdWok32Fmy7EtTCGVKj1TXZwvw1ZT-U 8552
cell2location/models/pymc3/simplified/LocationModelHierarchicalWMultiExperiment.py sha256=agSiKUhQrd51LVxucQTYdhj4mONKmgxgCnXdg4RzLz0 13941
cell2location/models/pymc3/simplified/LocationModelLinearDependentW.py sha256=xNNBmkK3GG7sx_PJ9NkkF3LwhvdRXtAejqMe3CplzAE 15395
cell2location/models/pymc3/simplified/LocationModelLinearDependentWMultiExperiment.py sha256=cauJJek-YasmFErEhKvM0jMTH42UAwWfKCpIya6nn00 16326
cell2location/models/pymc3/simplified/LocationModelLinearDependentWMultiExperimentNoMg.py sha256=0ln8U2EcZrAO8Ckj0Sbt4Umv-OChbQMqPVsCZgJtX8I 13369
cell2location/models/pymc3/simplified/LocationModelLinearDependentWMultiExperimentNoSegLs.py sha256=rs_QEyzEp6qpl3FIbnLPf9iYEGAXk1YOqK4ARsv4NgM 14854
cell2location/models/pymc3/simplified/LocationModelMultiExperiment.py sha256=xt8ppjhr8Hon66EPX0sZkIlIlZIspBt-4uaCJKIkMQE 13849
cell2location/models/pymc3/simplified/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cell2location/models/reference/RegressionGeneBackgroundCoverageGeneTechnologyTorch.py sha256=HnaDRq41id0M5Lif-Lxcf2EXYP5_XvdvH2Gd0K69YEg 15921
cell2location/models/reference/RegressionGeneBackgroundCoverageTorch.py sha256=3vBp54NJSis6p_t-ClFWVmLATtRRP6wNw56jrqxQ-Rg 13005
cell2location/models/reference/__init__.py sha256=t-RPTca9MmUbS6D_vGvW-x3Wm0GPsId-cqMncI0USns 403
cell2location/models/reference/_reference_model.py sha256=hct-O8dUOJA1KF7eiVpULWr6fAEvnQPc9t_FRy1l7G8 10496
cell2location/models/reference/_reference_module.py sha256=bBpsGowxStLf_hx5UwFGJlx73yZaMSYU9KjIDvrOzq4 16407
cell2location/models/simplified/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cell2location/models/simplified/_cell2location_v3_no_factorisation_module.py sha256=ZhVkbL97QBRFtFncCK1s-ZOES_4Wg_Jc0uFxzMllY4Y 16279
cell2location/models/simplified/_cell2location_v3_no_mg_module.py sha256=UoKsPfRe9Go4NBE2HF9PjgUq3O219gkmKN4RvBJXTKo 15890
cell2location/plt/RotateCrop.py sha256=IZ2_VPbSwUAfaAMnE5tfSmNtouq-0NQdFZFm_vT5bS4 3779
cell2location/plt/__init__.py sha256=DSHixtO-hsL4AjjAbHcuf57VHhVULUh73qdlhdAFWcU 410
cell2location/plt/mapping_video.py sha256=xmKCG-HJsMzCjZnl7nwKbHKxy4ueEYmCo1PxOQltyp0 15361
cell2location/plt/plot_expected_vs_obs.py sha256=wUfXFTX3d84Sm1W5LDrHgHEInxmNt9AwjLwfNReIUas 2966
cell2location/plt/plot_factor_spatial.py sha256=CnlCDYtsakYXXeytTS_4n7Pmi12EnI-xjQLbjQH8k9Y 5783
cell2location/plt/plot_heatmap.py sha256=2Ti8ZRja2kDyqDFhdVfESvHx_eNY927NuyCKJyrujn8 7114
cell2location/plt/plot_in_1D.py sha256=OcFO5eywbQ_Ujxis00-konsezGM8lGJkFK0SguiydAQ 8891
cell2location/plt/plot_spatial.py sha256=bsEqtdi2Y8JslIiZMR0g4AH6ICIxSl6CoziVebwqWeM 14163
cell2location/utils/__init__.py sha256=kA7YmJtPJjNi9HbOaxPFbSTJzO4aHMwt05jcuE-ZD9Q 768
cell2location/utils/_spatial_knn.py sha256=Cx4NSkcVT8Gfau2d0_sVPUgUJVjKGoSJM_hR1qtizTw 11532
cell2location/utils/filtering.py sha256=55Yp5j9afK81qxEuQMt0Dk_XnESCOu3-ANzW5A729Z0 2550
cell2location-0.6a0.dist-info/LICENSE sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ 11357
cell2location-0.6a0.dist-info/METADATA sha256=GTzesgbv5PoDKvs2-Eu4vBxnw8qzUu103liDPqWMDZw 16492
cell2location-0.6a0.dist-info/WHEEL sha256=EVRjI69F5qVjm_YgqcTXPnTAv3BfSUr0WVAHuSP3Xoo 92
cell2location-0.6a0.dist-info/top_level.txt sha256=2J7la8_AfsUX1qDOlxG9EywGgNmFOG8xbrb9x82P_Ew 14
cell2location-0.6a0.dist-info/RECORD — —

top_level.txt

cell2location