Path |
Digest |
Size |
CHEWBBACA/__init__.py |
sha256=1X5kk-wx4BPu-LJgtjkfia2ZtDoOHOAsSyEsLKKQCY0
|
22 |
CHEWBBACA/chewBBACA.py |
sha256=ISe6Pl_uTZrdkO_RQZQQ6N6NQ3bH1VBwtlmTQhuDbF8
|
72828 |
CHEWBBACA/CHEWBBACA_NS/__init__.py |
sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs
|
1 |
CHEWBBACA/CHEWBBACA_NS/down_schema.py |
sha256=1g_K1P2gC5exhJsN6krbKYTDAJLkSXxe2M6u3kjOC9I
|
25473 |
CHEWBBACA/CHEWBBACA_NS/load_schema.py |
sha256=3geV9nDiQ4Z9oGeIEkZFRtqCKeuO3JBzWjhoKPI7MeQ
|
54414 |
CHEWBBACA/CHEWBBACA_NS/stats_requests.py |
sha256=MLbBgr5zqSUOokG3tdtd3o-k88EjCgW2FxaFrzu5foc
|
16001 |
CHEWBBACA/CHEWBBACA_NS/sync_schema.py |
sha256=32SXUpxwdwacaCnJxaBbccbdUo36wFuIOCEFMdBO2Jc
|
45363 |
CHEWBBACA/PrepExternalSchema/PrepExternalSchema.py |
sha256=7V6YUSRRWFEpulyo4-oFZTe63lUY1uquqELmIwwarkI
|
26797 |
CHEWBBACA/PrepExternalSchema/__init__.py |
sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs
|
1 |
CHEWBBACA/SchemaEvaluator/CheckCDS.py |
sha256=FpzDuyWf3QDCfAlwR-87n4BDZ6NnYbU9GG6rhHmM_4Q
|
22022 |
CHEWBBACA/SchemaEvaluator/ValidateSchema.py |
sha256=4QShif7Sy9qZVzqkWjZJQCCJraxJDxXhAmKXV4EeYHI
|
24368 |
CHEWBBACA/SchemaEvaluator/__init__.py |
sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs
|
1 |
CHEWBBACA/SchemaEvaluator/alleleSizeStats.py |
sha256=vmYuVl16W0fZu9IBuVDbrPMNTy8g4cKZnTIbe8f9LC8
|
9754 |
CHEWBBACA/allelecall/BBACA.py |
sha256=Ru-TbqmbJmBntRrRTchZDLKimZzIMsie83-nb2u7o4s
|
28430 |
CHEWBBACA/allelecall/__init__.py |
sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs
|
1 |
CHEWBBACA/allelecall/callAlleles_protein3.py |
sha256=wh05yzZFtNMq8rLIc4DOjYSCvO1YJbTuD5eOnOee4Dk
|
29461 |
CHEWBBACA/createschema/CreateSchema.py |
sha256=frfFR5nYEgkG7DkWrncZnRHa8y13SlBYfDh9NXBCtSc
|
14229 |
CHEWBBACA/createschema/PPanGen.py |
sha256=AWnGBtJHUJYruXnwS4crhOOBGTCasl6Ehts9HfpDX1c
|
17126 |
CHEWBBACA/createschema/__init__.py |
sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs
|
1 |
CHEWBBACA/createschema/init_schema_4_bbaca.py |
sha256=7gVbMzjIdo4vuCGICw3Rkl3iGUGmNg2vigvFh2hkrxs
|
1353 |
CHEWBBACA/prodigal_training_files/Acinetobacter_baumannii.trn |
sha256=ztXIFhItHNFkeuZR-4XyxvvT_AgPPT-44HZWGuOc5Bo
|
558392 |
CHEWBBACA/prodigal_training_files/Campylobacter_jejuni.trn |
sha256=XKJLhr2taMzU9ye0j3vI0CLKrSR3eYavL8nmwd6U63g
|
558392 |
CHEWBBACA/prodigal_training_files/Enterococcus_faecium.trn |
sha256=k0UKzdRxC7eN-bRlYIajfiORRVmlO4l_GQFlZ6Z_RVA
|
558392 |
CHEWBBACA/prodigal_training_files/Escherichia_coli.trn |
sha256=g73Lb64BT3Ye4uk2VD9l4ebPgqE-uwu-fSWCmeGIDRo
|
558392 |
CHEWBBACA/prodigal_training_files/Haemophilus_influenzae.trn |
sha256=wXfGvVPPKINx_eJOLPwxnRs3EX8d20iG7D1SkARuLzs
|
558392 |
CHEWBBACA/prodigal_training_files/Legionella_pneumophila.trn |
sha256=aLT5qW8wWZBaJ6WPQmL1FT6nnP8AyE869MSB2Te27dg
|
558392 |
CHEWBBACA/prodigal_training_files/Listeria_monocytogenes.trn |
sha256=yHr3A6dKonbMJKZn4HMuRajRiS_pOPwntGww4j1eJ08
|
558392 |
CHEWBBACA/prodigal_training_files/README.md |
sha256=5GoRcV_2WFaU7xZ3KrPzA3Jr-M7Bfz9zrAza7LVixNU
|
1887 |
CHEWBBACA/prodigal_training_files/Salmonella_enterica.trn |
sha256=r342q4xoiMcVVeu5hQJWff9_Kixko8sbPUn67FJYgLE
|
558392 |
CHEWBBACA/prodigal_training_files/Staphylococcus_aureus.trn |
sha256=-mKez17901wfB20lEcTdram73HggK0cA_oa5mKIUVvk
|
558392 |
CHEWBBACA/prodigal_training_files/Staphylococcus_haemolyticus.trn |
sha256=P_Fd7fxXIGgQ2mhk4wYEaWxTMkrHuILcJ2Kn1cWvSQM
|
558392 |
CHEWBBACA/prodigal_training_files/Streptococcus_agalactiae.trn |
sha256=5NwwWeF7TkfsKBHscY5Run577n7F4tDV7X1kLBl_NAw
|
558392 |
CHEWBBACA/prodigal_training_files/Streptococcus_canis.trn |
sha256=vSz8GzMG3Pz8y7pvKOp8pKfYZpiAwDEbSbnz1Rg8LSM
|
558392 |
CHEWBBACA/prodigal_training_files/Streptococcus_dysgalactiae.trn |
sha256=l3cm8V8Rbv9Z79Sr5WOlqhJ0-qfLBM1Wxwq02qbsclw
|
558392 |
CHEWBBACA/prodigal_training_files/Streptococcus_equi.trn |
sha256=6VbZCEQfs4ak0aF5bhb2wyjlMWEZNIOsrxIjYSGlwEM
|
558392 |
CHEWBBACA/prodigal_training_files/Streptococcus_pneumoniae.trn |
sha256=EWgWmWW0LEG4b-Y9NoriicmiihxsH1h3Gf6eqkn9mAQ
|
558392 |
CHEWBBACA/prodigal_training_files/Streptococcus_pyogenes.trn |
sha256=A19VuFtLQ5SU0uDYkgrFQWz3jj9wc6QOZmtSzt5u-WM
|
558392 |
CHEWBBACA/prodigal_training_files/Yersinia_enterocolitica.trn |
sha256=UsL-Jjpunq1WQr3yLGfwxCKB2C3F1HNconmsmfd569w
|
558392 |
CHEWBBACA/utils/AutoAlleleCDSCuration.py |
sha256=lwAOuQHt7jCfogOhm_EJvl5qrCoo1UA1UAX_EH4pc6g
|
2279 |
CHEWBBACA/utils/AutoAlleleCuration.py |
sha256=EScsX36vF440r6uj4h-gEZe1ril2Gb0Q4RKdIuEKBdg
|
2002 |
CHEWBBACA/utils/CommonFastaFunctions.py |
sha256=yW9gJFm0kW2T9uUUrtkH3coGMQXirec2laVLVpAQxYc
|
3187 |
CHEWBBACA/utils/CountNumberMissingData.py |
sha256=WIGAgfQ5i30tF-Tn_KiR-VbRiGNSahSX66CccrVohz4
|
1387 |
CHEWBBACA/utils/Create_Genome_Blastdb.py |
sha256=KfMkdiiC8htiZ9uOy7iIDW6DFlxSBpyYxi7_HM4AP7A
|
491 |
CHEWBBACA/utils/Extract_cgAlleles.py |
sha256=zLf_UwVzr2jdjWbCPmsFSNspaZDXvaeydYuVQo13b18
|
11736 |
CHEWBBACA/utils/ParalogPrunning.py |
sha256=rfQYRpr-fAlWZWPZIC_IpgBqUMWNDr99mK-sCT4ch-g
|
4104 |
CHEWBBACA/utils/RemoveGenes.py |
sha256=cGZZ-GLOUa_5VjSTpdYUIFShCuFMspnulVpqulpfOwg
|
1497 |
CHEWBBACA/utils/RemoveGenomes.py |
sha256=QKD8Mv991F4PUudEMbG_RvCptniVpilLO5LBil8aL9I
|
1044 |
CHEWBBACA/utils/TestGenomeQuality.py |
sha256=8NivTMi_lq-EuhVsVqE2n3hIzM5Nomay4WBkWIYXHJU
|
14080 |
CHEWBBACA/utils/__init__.py |
sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs
|
1 |
CHEWBBACA/utils/assemblyStats.py |
sha256=KEi4GM7QSqiuUzeEbj96G-3y8c7vXAcxPN4DVJayFhk
|
8509 |
CHEWBBACA/utils/auxiliary_functions.py |
sha256=Td2AIBi9MCqRtH9bfiNJNFS4PBASEHzrTbPf5u2pM9s
|
55518 |
CHEWBBACA/utils/constants.py |
sha256=7AeuOjQ7dUFpH8ILYPCDe3AfxMznI37ySH_k2tSsDok
|
1524 |
CHEWBBACA/utils/determine_paralogs.py |
sha256=AVigBE4vFB-AcJDadu7Ur9LUKB7tT5DjqvlVNy4-GA4
|
18072 |
CHEWBBACA/utils/init_schema_4_bbaca.py |
sha256=zWwjSKSIF6E5K4zMgXsZIynO-EJzCoipESc177SCvTw
|
9240 |
CHEWBBACA/utils/parameters_validation.py |
sha256=zCYIVEsIlRtOzkU2rD_Icb6fFol1mqIYeWy3DXOReOg
|
8381 |
CHEWBBACA/utils/profile_joiner.py |
sha256=5J0nZ78TAH-qiXq2vyE8N9OjDhFII8jBEPbihK59U_A
|
1277 |
CHEWBBACA/utils/runProdigal.py |
sha256=RPYBDwySS-eB1cGRR_tRM2yY81ljSddwAL7ksZtF8zE
|
2528 |
CHEWBBACA/utils/sqlite_functions.py |
sha256=nC5KfNumG4fPgREvZrQrDnLdJa2HssOn_mjERQl3b_g
|
20133 |
CHEWBBACA/utils/uniprot_find.py |
sha256=UVZDsCHd_tsT9etgxPJNmzHr-7h7YWCXNqhfPy0_e7k
|
7324 |
chewBBACA-2.5.6.dist-info/LICENSE |
sha256=jOtLnuWt7d5Hsx6XXB2QxzrSe2sWWh3NgMfFRetluQM
|
35147 |
chewBBACA-2.5.6.dist-info/METADATA |
sha256=iktOnqSo5bMi0lXxri3We9xIBJAy1qTKPLSyOZ2phQ8
|
645 |
chewBBACA-2.5.6.dist-info/WHEEL |
sha256=S8S5VL-stOTSZDYxHyf0KP7eds0J72qrK0Evu3TfyAY
|
92 |
chewBBACA-2.5.6.dist-info/entry_points.txt |
sha256=pWhnZurdWR7Qwi4pcZ6LQzwsmlN5436QFy6kqOGslL0
|
93 |
chewBBACA-2.5.6.dist-info/top_level.txt |
sha256=7YlqULXJUHMuBLS5QBuqDkB4lvM1y0-HJcwWpIiDnK0
|
10 |
chewBBACA-2.5.6.dist-info/RECORD |
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