Reverse Dependencies of fastcluster

The following projects have a declared dependency on fastcluster:

• abutils — Utilities for analysis of adaptive immune receptor repertoire (AIRR) data
• ann-linkage-clustering — Linkage clustering via Approximate Nearest Neighbors
• astir — no summary
• astroCAST — Package to analyze calcium fluorescence events in astrocytes
• bignmf — Non-negative matrix factorization
• braintracer — A complete processing pipeline for anatomical neuronal tracing.
• bsxplorer — Analytical framework for BS-seq data comparison and visualization
• clearCNV — Clinical sequencing panel CNV caller and visualizer
• clinc — Cell Lineage from Normalized Covariance
• closely — Closely find closest pairs of points, eg duplicates, in a dataset
• clubcpg — CluBCpG is a software package built to analyze whole genome bisulfite sequencing (WGBS) data.
• cnmf — Consensus NMF for scRNA-Seq data
• cnmfsns — cNMF Solution Network Space
• ConCorr — A small fMRI functional connectivity toolbox
• cospar — CoSpar: integrating state and lineage information for dynamic inference
• DBRetina — DBRetina Python Package
• dedupe-fh — A python library for accurate and scaleable data deduplication and entity-resolution
• dedupe-fork-eccovia — A python library for accurate and scaleable data deduplication and entity-resolution
• doc2map — Beautiful and interactive visualisations for NLP Topics
• eats-worm — Method for extracting GCaMP signal from volumetric imaging recordings
• falcon-ms — Large-scale tandem mass spectrum clustering using fast nearest neighbor searching
• forager-server — A web-based data exploration system for rapid task definition.
• glue-heatmap — A Heatmap viewer
• hgsig — Differential Representation with Hypergeometric Tests
• hytraj — Implementation of HySPLIT based trajectory modeling and analysis in python
• linkageMapper — Genomic similarities per region
• MANAclust — Multi Affinity Network Association
• metacells — Single-cell RNA Sequencing Analysis
• mosaicmpi — mosaicMPI: Mosaic Multi-resolution Program Integration
• msmbuilder2022 — MSMBuilder: Statistical models for Biomolecular Dynamics
• ngs-toolkit — A toolkit for NGS analysis with Python.
• omniplot — To draw scientific plots easily
• picture-text — Interactive tree-maps for text corpora with SBERT & Hierarchical Clustering (HAC)
• pymousse — plagiarism detection using MOSS with post-processing
• pyturbseq — no summary
• rogi — Measures of roughness for molecular property landscapes
• salamander-learn — Salamander is a non-negative matrix factorization framework for signature analysis
• scAAnet — An implementation of nonlinear archetypal analysis on single-cell RNA-seq data through autoencoder
• scab — Single cell analysis of B cells
• scatcluster — A workflow for clustering continuous time series with a deep scattering network.
• scatseisnet-gpu — no summary
• smmuty — Utilities for single-cell multi-omics data
• stanscofi — Package for STANdard drug Screening by COllaborative FIltering. Performs benchmarks against datasets and SotA algorithms, and implements training, validation and testing procedures.
• starcatpy — Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs
• timewizard — Your timeseries woes will magically disappear
• transport-tools — a library for massive analyses of internal voids in biomolecules and ligand transport through them
• treeCl — Phylogenetic Clustering Package
• valis-wsi — no summary
• veta — Simple variant prediction evaluation
• vivs — Calibrated Variational Inference for single-cell omics.