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0.1.7 instanovo-0.1.7-py3-none-any.whl

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Project: instanovo
Version: 0.1.7
Filename: instanovo-0.1.7-py3-none-any.whl
Download: [link]
Size: 61170
MD5: cae8c8c9433e8db6612c6062a36aad67
SHA256: 2355fbea63d93e05aaa86f9a1792c40fe1450b49ae82471ef0f8c8a46fadbebe
Uploaded: 2024-03-05 22:52:40 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt

METADATA

Metadata-Version: 2.1
Name: instanovo
Version: 0.1.7
Summary: De novo sequencing with InstaNovo
Author: InstaDeep
Home-Page: https://github.com/instadeepai/InstaNovo
Requires-Dist: aiobotocore (==2.4.1)
Requires-Dist: boto3 (==1.24.59)
Requires-Dist: botocore (==1.27.59)
Requires-Dist: click (==8.1.7)
Requires-Dist: cloudpathlib (==0.10.0)
Requires-Dist: datasets (==2.14.5)
Requires-Dist: depthcharge-ms (==0.1.0)
Requires-Dist: fastprogress (==1.0.3)
Requires-Dist: jiwer (==3.0.3)
Requires-Dist: matchms (==0.22.0)
Requires-Dist: matplotlib (==3.7.2)
Requires-Dist: numba (==0.57.1)
Requires-Dist: numpy (==1.23.3)
Requires-Dist: omegaconf (==2.2.3)
Requires-Dist: pandas (==2.0.3)
Requires-Dist: polars (==0.19.7)
Requires-Dist: protobuf (==3.19.6)
Requires-Dist: pyarrow (==15.0.0)
Requires-Dist: python-dotenv (==0.21.0)
Requires-Dist: pytorch-lightning (==1.8.6)
Requires-Dist: seaborn (==0.12.0)
Requires-Dist: spectrum-utils (==0.4.1)
Requires-Dist: tensorboard (==2.10.1)
Requires-Dist: tensorboardX (==2.5.1)
Requires-Dist: torch (==2.2.1)
Requires-Dist: tqdm (==4.65.0)
Requires-Dist: transfusion-asr (==0.1.0)
Requires-Dist: pyopenms (==2.7.0); python_version < "3.10"
Requires-Dist: scikit-learn (==1.1.2); python_version < "3.11"
Requires-Dist: pyopenms (==3.1.0); python_version >= "3.10"
Requires-Dist: scikit-learn (==1.4.1.post1); python_version >= "3.11"
Description-Content-Type: text/markdown
License-File: LICENSE.md
[Description omitted; length: 7399 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.42.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
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instanovo/diffusion/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
instanovo/diffusion/config.py sha256=QTAtS359Fp-nCMD8l95gvS3-yhy7ThaG1TTnwxHbIkQ 1496
instanovo/diffusion/dataset.py sha256=Y60nSDRdBXtMi7QdhMno3hceP2PGCBnbZdZjyLuvHsk 5594
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instanovo/diffusion/model.py sha256=Qn2XzFCtBVwyZ1sWGNV4xOt7Fs3RViLoIheVOHhc4xg 8162
instanovo/diffusion/multinomial_diffusion.py sha256=AlEvFIgMSkSdWhr-Z1_D8Bl82xBhDR-ISa5bYeww8Uo 13616
instanovo/diffusion/predict.py sha256=krFPhG_oBiXwISwnVFLMuW8qysZurlpNuBe5teGdg6Q 5079
instanovo/inference/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
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instanovo/transformer/decoding.py sha256=dEIVhYxT6fa-AcKBMvdtskr3KQzw5pfhuzI4fUVxMx8 3672
instanovo/transformer/layers.py sha256=sSPxKW3UBfm-tFa_L1cl9RaZ0SvENrp_AKCwEeixcO8 2218
instanovo/transformer/model.py sha256=CA9xewfRXz3Zvsc2p5LNbb-QAaXLx-X00TxAHpeep68 12268
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instanovo/utils/convert_to_ipc.py sha256=BGKtK7T77p10suD3RJDs4vXZXeYt1Mq0a_N-5c8nSSw 8718
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instanovo/utils/residues.py sha256=EAigbAQzqltmUhBzTwg3DVSCRikCYKrEUf9LeeImBLk 2967
instanovo-0.1.7.data/data/requirements.txt sha256=rgYM24iCbZLnoS9qL0CkGwbdAD6DRUOn7srHmCpR5jE 654
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instanovo-0.1.7.dist-info/top_level.txt sha256=BkIS2lK7JHnk1rlxbvxTwsC484kNe4WQnuYsE-R5eu4 16
instanovo-0.1.7.dist-info/RECORD — —

top_level.txt

instanovo
tests