mdciao

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0.0.6 mdciao-0.0.6-py3-none-any.whl

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Project: mdciao
Version: 0.0.6
Filename: mdciao-0.0.6-py3-none-any.whl
Download: [link]
Size: 3135334
MD5: b7fb99f1ec614ee84b2d60e37352bd4a
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Uploaded: 2023-08-08 14:36:16 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: mdciao
Version: 0.0.6
Summary: mdciao: Analysis of Molecular Dynamics Simulations Using Residue Neighborhoods
Author-Email: guillermo.perez[at]charite.de
Home-Page: https://github.com/gph82/mdciao
Project-Url: docs, http://proteinformatics.org/mdciao
Classifier: Development Status :: 4 - Beta
Classifier: Programming Language :: Python :: 3
Classifier: Operating System :: OS Independent
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+)
Classifier: Topic :: Scientific/Engineering :: Chemistry
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Visualization
Requires-Python: >=3.6
Requires-Dist: cython
Requires-Dist: numpy (>=1.18.1)
Requires-Dist: mdtraj
Requires-Dist: pandas
Requires-Dist: matplotlib
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Requires-Dist: biopython (>=1.77)
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Requires-Dist: astunparse (<1.6.3); python_version == "3.8"
Description-Content-Type: text/x-rst
License-File: LICENSE.txt
[Description omitted; length: 8041 characters]

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mdciao