Reverse Dependencies of nipype

The following projects have a declared dependency on nipype:

• auto-learn-gpt — autoML for training and inference Deep Learning model
• bidsonym — A BIDSapp for deidentification of neuroimaging data.
• capsul — CAPSUL
• cbicqc — MRI phantom quality control tool
• clinica — Software platform for clinical neuroimaging studies
• cubric-mrs — a collection of processing scripts for handling MRS data at CUBRIC
• difit — Diffusion weighted models fitting
• django-mri — A reusable Django app to manage MRI data.
• dmriprep — dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data.
• dosma — An AI-powered open-source medical image analysis toolbox
• ephypype — Python package providing pipelines for electrophysiological (EEG/MEG) data within nipype framework.
• fcdproc — Python package for FCD lesion detection.
• fitlins — Fit Linear Models to BIDS Datasets
• fitz — Fitz: Workflow Mangement for neuroimaging data.
• flowdump — NiPype-1 workflow serializer.
• flywheel-gear-toolkit — Tooling for developing Flywheel gears
• fmri-anonymizer — Anonymize your DICOM and NIFTI files with this tool easily.
• fmridenoise — fMRIDenoise - automated denoising, denoising strategies comparison, and functional connectivity data quality control.
• fmriprep — A robust and easy-to-use pipeline for preprocessing of diverse fMRI data
• fmristats — Modelling the data and not the images in FMRI
• frat-brain — Application for ROI fMRI data analysis.
• fw-gear-dcm2niix — A Flywheel Gear for implementing Chris Rorden's dcm2niix for converting DICOM (or PAR/REC) to NIfTI (or NRRD).
• fw-gear-fsl-fslhd — Gear parsing metadata from nifti file using FSL's fslhd function.
• fw-gear-hierarchy-curator — Custom hierarchy curation gear
• graphpype — Graph analysis for neuropycon (using nipype, and ephypype); based on previous packages dmgraphanalysis and then dmgraphanalysis_nodes and graphpype
• hcpre — Generalized launcher for human connectome project BOLD preprocessing
• heudiconv — Heuristic DICOM Converter
• livingpark-utils — Utility functions to write LivingPark notebooks.
• lyman — lyman: neuroimaging analysis in Python
• macapype — Pipeline for anatomic processing for macaque
• mia-processes — mia_processes
• mindstorm — Mindstorm: Advanced analysis of neuroimaging data
• mri_tools — Various tools for MRI related work.
• mriqc — Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain.
• nibabies — Processing workflows for magnetic resonance images of the brain in infants
• nibetaseries — BetaSeries Correlations implemented in Nipype
• niflow-nipype1-examples — niflow-nipype1-examples workflow package
• niflow-nipype1-workflows — niflow-nipype1-workflows workflow package
• nipype-fsl-anat — Nipype interface(s) wrapping the `fsl_anat` command line tool
• nipype-generate-fieldmaps — Nipype workflow to generate fieldmaps from EPI acquisitions with differing phase-encoding directions
• nipype2pydra — Tool for converting Nipype tasks and workflows into Pydra syntax
• nireports — NiReports - The Visual Report System (VRS) of NiPreps
• niworkflows — NeuroImaging Workflows provides processing tools for magnetic resonance images of the brain.
• own-knowledge-gpt — Custom Knowledge GPT
• p3proc — The p3 fmri processing pipeline
• panpipelines — MRI Processing Pipelines for PAN Healthy Minds for Life Study
• patch-denoise — Denoising method for sequence of images or volumes. Primarly targeting fMRI data.
• petdeface — A nipype PET and MR defacing pipeline for BIDS datasets utilizing FreeSurfer's MiDeFace.
• petprep-hmc — PETPrep Head Motion Correction Workflow
• petutils — no summary
• pipetography — Pre/Post-processing pipeline for tractography wrapped around nipype and mrtrix3
• populse-mia — populse_mia
• PyBASC — A bootstrapping clustering algorithm for Python
• pydra-nipype1 — Tools for importing nipype 1.x interfaces into Pydra
• pylabber — A Django app to manage neuroscience research
• pyslicetime — Python Slice Timing Correction
• qsmxt — no summary
• rabies — RABIES: Rodent Automated Bold Improvement of EPI Sequences.
• smriprep — sMRIPrep (Structural MRI PREProcessing) pipeline
• swane — Standardized Workflow for Advanced Neuroimaging in Epilepsy
• SWANi — Standardized Workflow for Advanced Neuroimaging
• trampolino — A meta-pipeline tool for tractography based on Nipype.