pastml

View on PyPIReverse Dependencies (0)

1.9.43 pastml-1.9.43-py3-none-any.whl

Wheel Details

Project: pastml
Version: 1.9.43
Filename: pastml-1.9.43-py3-none-any.whl
Download: [link]
Size: 463989
MD5: 7948c32366418fa1ffe3db320fa82456
SHA256: ddcbb474e6fb3c801787c8870a9b51fb8e9af7ec8c6396b6548c4d3f4c710aa8
Uploaded: 2024-02-26 16:59:34 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: pastml
Version: 1.9.43
Summary: Ancestral character reconstruction and visualisation for rooted phylogenetic trees.
Author: Anna Zhukova
Author-Email: anna.zhukova[at]pasteur.fr
Home-Page: https://github.com/evolbioinfo/pastml
Keywords: PASTML,visualisation,phylogeny,ancestral character reconstruction
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Console
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Software Development :: Libraries :: Python Modules
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3 :: Only
Requires-Python: >=3.9
Requires-Dist: ete3 (>=3.1.1)
Requires-Dist: pandas (>=1.0.0)
Requires-Dist: numpy (>=1.22)
Requires-Dist: jinja2 (>=2.11.0)
Requires-Dist: scipy (>=1.5.0)
Requires-Dist: itolapi (>=4.0.0)
Requires-Dist: biopython (>=1.70)
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 7275 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.37.1)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
LICENSE sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY 35149
README.md sha256=XSTdqV4_jdM3jOd5lCU2i0XySPMXoDSbIOaypDSRMug 7273
pastml/__init__.py sha256=T9Oc3X_qVKk_TMRxaMGv5T8h0w80bSROW-TaHrsWuFc 3179
pastml/acr.py sha256=F_ru7fO-6ryJj5PyR8wWDAer_OCIqAdgzfE69PXecx4 64980
pastml/annotation.py sha256=8fx9MAZktiSN_2odtdHuxFSqhXtVivQRKSveoPsMM8o 4533
pastml/file.py sha256=VT_XQ9jBwt5QlvraLmKFt758Ht1sQHX43PW2TSXRA5Q 3982
pastml/ml.py sha256=oIUwfjd2L9cVBZEmfp0BngKnvNryre1UMa7DOXw8-K4 44933
pastml/parsimony.py sha256=ROt54Km4KJOkDJ98c5VZYaqKE-32LIDWgD52T53dlKg 14990
pastml/tree.py sha256=TnyW_Dei-ZB1aeUbQ_Q47oAnH17ctN-LiCplxxV33D4 18744
pastml/models/CustomRatesModel.py sha256=JaR3U4p1augsIPgdMt97SxrUwGYZf-seHENBYFZE0MY 3956
pastml/models/EFTModel.py sha256=gN0Asz5gA5nXX4ibehpIQh4nydm-0kuWYgZqR5hxPyk 1779
pastml/models/F81Model.py sha256=_b7gYeibLRarjLygT2kyyOoVypjoxDD1pmp9ri4PjvA 2092
pastml/models/HKYModel.py sha256=A7sSES0i3guOBaG1QXLwPq2tpRdtRv_2cjjvPb0X7_s 7436
pastml/models/JCModel.py sha256=dmRTPmsyo4W0QRAbCLwM0a90x7wJq8wcgPSd4XlFfWE 1735
pastml/models/JTTModel.py sha256=RVoGga7espEGEJ8ly_DARZzRnCT5-oVny6uwuxMOlNw 5304
pastml/models/__init__.py sha256=Sl-YSpAbudUok2qZyanlQzhxud38VDCkhFENz8PT5-o 19209
pastml/models/generator.py sha256=wheqwdJuGYMx5yUdMj-IZpcn_FmOZfYaqAOI_xUOiis 2173
pastml/templates/geo_map.html sha256=e8KeB9q-8kbHa4bGg6IfoLG8A1jOnBv1LkGDB0EAi7I 2845
pastml/templates/index.html sha256=e7JlD9JD54Mz3Fz67M13UegurKNTu4J9oPSsnQP5_Ho 3685
pastml/templates/pie_tree.js sha256=TJd0XLpHdpVvZGz8A8O7qF7vmlNxCzDCNfbLmJqgAnc 8958
pastml/templates/pie_tree_simple.js sha256=2ury7zaENmqoO8I7tiHUVCkAwXf1baK6CQwFj2qlYwM 8826
pastml/templates/time_slider.html sha256=3gGJi9NRjXYzmQogebGm8pwreHBDjKXfa5k5mu-If2A 221
pastml/templates/transitions.js sha256=RKg7cdWAVB3IEH27ciDfZh5T8TEJO7mqoap_uOlDEaU 6526
pastml/templates/css/bootstrap.min.css sha256=LA89z-k9fjgMKQ_kq4OO2Mrf8VltYml_VES-Rg0fh20 144877
pastml/templates/css/jquery.qtip.min.css sha256=SjzMC5ALEHxcwSVGmVxaN3u6GctDjMatNXq_MGoDmAg 9208
pastml/templates/fonts/glyphicons-halflings-regular.eot sha256=E2NNqH2eI_jD7ZEIzhck0YOjmtBy5z4bPYy_ZG0tBAc 20127
pastml/templates/fonts/glyphicons-halflings-regular.svg sha256=QvYGWdJlwaPDD5-kKry7Vr1KU69Ng9MW1t16NpA8Q-U 108738
pastml/templates/fonts/glyphicons-halflings-regular.ttf sha256=45UEQJN1fYKvyxOJV9BqHqk2G9zwtELQahioBRr1dFY 45404
pastml/templates/fonts/glyphicons-halflings-regular.woff sha256=omOU9-3hAMoRjv8u2ghZYnWpg5uVnCJuFUOVV6WoB0I 23424
pastml/templates/fonts/glyphicons-halflings-regular.woff2 sha256=_hhdEaSWdokNR7t4MxKgzaWkTEA5IUCU55V7TAQO8Rw 18028
pastml/templates/js/0.0-jquery.min.js sha256=VAvG3sHdS5LqTT-5A_aeq_bZGa_Uj04xKxY8KM_w9EE 95786
pastml/templates/js/0.1-jquery.qtip.min.js sha256=jffSxovmZxOU5K-i27VpMMzSmFGuqKiYzmFo-0sba10 44235
pastml/templates/js/1.1-cytoscape.min.js sha256=CKrHaWBNsta8U8sRcNWgtLpEBbujNS6SKRqlnhXUVsQ 345501
pastml/templates/js/1.2-cytoscape-qtip.js sha256=oKVWr5n46AV7zkFtGbKMTEWDJ8iV_Y_BLcrkgBDYi_w 11644
pastml/templates/js/1.3-cytoscape-svg.js sha256=w7cmqiYBPmRVphmfZwYE6YPmLguHzhFK2XPecp8-qV4 52599
pastml/templates/js/1.4-layout-base.min.js sha256=w2iGhSmy5BvY_F7jEhPE2URD1CLGAhTEgcWUX1dZP_k 51443
pastml/templates/js/1.5-cose-base.min.js sha256=O-Psp5AHEnuYMTAqTtrosBhpa9b6AEYEmL5iD3td4hc 19738
pastml/templates/js/1.6-cytoscape-cose-bilkent.min.js sha256=_tQF2JqldKv3JQTtnLj3srsnOVmXjb9yhNkx4NSgbkY 6437
pastml/templates/js/bootstrap.min.js sha256=5-02zu5UULQkO7w1GIr6vftCgMfFdZcAHeDtFnKZsBs 48944
pastml/utilities/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
pastml/utilities/calculate_changes.py sha256=UmcPhipfqtxkK1uKrOsOvEib9kBS7HBvdjtToAKBtII 2119
pastml/utilities/state_simulator.py sha256=4GYr9fG7whAkxJ1-Xp_Bt8RyU0f3YtrFI050H7npYmQ 1132
pastml/utilities/transition_counter.py sha256=b3hfR7o9djbFfR0nCap8LOeEwByQU3A3D_ozDx9vuFI 16456
pastml/visualisation/__init__.py sha256=RJqzpN_A-0y8q8bua2lREZn4omfCfhxK6nUilo0uPBU 556
pastml/visualisation/colour_generator.py sha256=AL0_CtukOd8H60CcaOLbNVUtvgWBFQRkJtrbXpsZ7Bk 4386
pastml/visualisation/cytoscape_manager.py sha256=n0a0IS5QvqBGDxFrtTZOEkeUbA-Mbekxi0nQhGxBVYE 40694
pastml/visualisation/generate_geomap.py sha256=dMdd87dl4aOU5g7xA6_BJMfRHlDiRzfZn3UHP90Mb0A 5471
pastml/visualisation/itol_manager.py sha256=X7ep1E0VDSq-NUGjZZXYr2sl7y6JmRDz7Ztp7RFZE-g 8152
pastml/visualisation/tree_compressor.py sha256=PSLyd5aO8xBy9jw1hhhKht54K3OhGr77MJ7w-rH7_AU 14569
pastml-1.9.43.dist-info/LICENSE sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY 35149
pastml-1.9.43.dist-info/METADATA sha256=-6AYfm2Vma1LvQDo0tAjpnLskKeRk6v0Ptx-QKyymsw 8473
pastml-1.9.43.dist-info/WHEEL sha256=G16H4A3IeoQmnOrYV4ueZGKSjhipXx8zc8nu9FGlvMA 92
pastml-1.9.43.dist-info/entry_points.txt sha256=1EI2EZD-qtfP692LS1d9KyR0N-ouKTjKcPmoMl5P8UU 157
pastml-1.9.43.dist-info/top_level.txt sha256=Y0cQkFy44X2358j0z-1-c5fzij8V3cISRlUDvgGy-Rc 7
pastml-1.9.43.dist-info/RECORD

top_level.txt

pastml

entry_points.txt

geomap = pastml.visualisation.generate_geomap:main
pastml = pastml.acr:main
transition_counter = pastml.utilities.transition_counter:main