Wheelodex » Projects » sourmash

sourmash

View on PyPI — Reverse Dependencies (16)

4.8.8 sourmash-4.8.8-py3-none-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
sourmash-4.8.8-py3-none-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl
sourmash-4.8.8-py3-none-manylinux_2_17_aarch64.manylinux2014_aarch64.whl
sourmash-4.8.8-py3-none-win_amd64.whl
sourmash-4.8.8-py3-none-macosx_10_14_x86_64.whl
sourmash-4.8.8-py3-none-macosx_11_0_arm64.whl

Wheel Details

Project: sourmash
Version: 4.8.8
Filename: sourmash-4.8.8-py3-none-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Download: [link]
Size: 2802034
MD5: 875f4ad10eabf348a70ff8e9e79f04bc
SHA256: fef5bb197f0f15b04e1d6fd7191630e8e555dfc0e80137a070f6c6b4fed04aa1
Uploaded: 2024-04-09 23:05:11 +0000

dist-info

METADATA · WHEEL · RECORD · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: sourmash
Version: 4.8.8
Summary: tools for comparing biological sequences with k-mer sketches
Author: Luiz Irber, N. Tessa Pierce-Ward, Mohamed Abuelanin, Harriet Alexander, Abhishek Anant, Keya Barve, Colton Baumler, Olga Botvinnik, Phillip Brooks, Peter Cock, Daniel Dsouza, Jade Gardner, Laurent Gautier, Tim Head, Mahmudur Rahman Hera, Hannah Eve Houts, Lisa K. Johnson, Fabian Klötzl, David Koslicki, Katrin Leinweber, Marisa Lim, Ricky Lim, Bradley Nelson, Ivan Ogasawara, Taylor Reiter, Camille Scott, Andreas Sjödin, Connor T. Skennerton, Jason Stajich, Daniel Standage, S. Joshua Swamidass, Connor Tiffany, Pranathi Vemuri, Erik Young, Nick H, C. Titus Brown
Author-Email: Luiz Irber <luiz[at]sourmash.bio>, N. Tessa Pierce-Ward <tessa[at]sourmash.bio>
Maintainer-Email: "Luiz C. Irber, Jr" <luiz[at]sourmash.bio>, "C. Titus Brown" <titus[at]idyll.org>, "N. Tessa Pierce-Ward" <ntpierce[at]ucdavis.edu>
Project-Url: Homepage, https://sourmash.bio/
Project-Url: Documentation, https://sourmash.readthedocs.io
Project-Url: CI, https://github.com/sourmash-bio/sourmash/actions
Project-Url: Source, https://github.com/sourmash-bio/sourmash
Project-Url: Tracker, https://github.com/sourmash-bio/sourmash/issues
License: BSD-3-Clause
Keywords: minhash,bioinformatics
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Console
Classifier: Environment :: MacOS X
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Natural Language :: English
Classifier: Operating System :: POSIX :: Linux
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Programming Language :: Rust
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.10
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.10
Requires-Dist: screed (<2,>=1.1.3)
Requires-Dist: cffi (>=1.14.0)
Requires-Dist: numpy
Requires-Dist: matplotlib
Requires-Dist: scipy
Requires-Dist: deprecation (>=2.0.6)
Requires-Dist: cachetools (<6,>=4)
Requires-Dist: bitstring (<5,>=3.1.9)
Requires-Dist: pytest (<8.2.0,>=6.2.4); extra == "test"
Requires-Dist: pytest-cov (<6.0,>=4); extra == "test"
Requires-Dist: pytest-xdist (>=3.1); extra == "test"
Requires-Dist: pyyaml (<7,>=6); extra == "test"
Requires-Dist: diff-cover (>=7.3); extra == "test"
Requires-Dist: covdefaults (>=2.2.2); extra == "test"
Requires-Dist: recommonmark; extra == "test"
Requires-Dist: hypothesis; extra == "test"
Requires-Dist: build; extra == "test"
Requires-Dist: jupyter; extra == "demo"
Requires-Dist: jupyter_client; extra == "demo"
Requires-Dist: ipython; extra == "demo"
Requires-Dist: sphinx (<8,>=4.4.0); extra == "doc"
Requires-Dist: myst-parser (==2.0.0); extra == "doc"
Requires-Dist: Jinja2 (==3.1.3); extra == "doc"
Requires-Dist: alabaster; extra == "doc"
Requires-Dist: sphinxcontrib-napoleon; extra == "doc"
Requires-Dist: nbsphinx; extra == "doc"
Requires-Dist: ipython; extra == "doc"
Requires-Dist: docutils (<0.21,>=0.17.1); extra == "doc"
Requires-Dist: ipfshttpclient (>=0.4.13); extra == "storage"
Requires-Dist: redis; extra == "storage"
Requires-Dist: sourmash[demo,doc,storage,test]; extra == "all"
Provides-Extra: test
Provides-Extra: demo
Provides-Extra: doc
Provides-Extra: storage
Provides-Extra: all
Description-Content-Type: text/markdown; charset=UTF-8; variant=GFM
License-File: LICENSE
[Description omitted; length: 6000 characters]

WHEEL

Wheel-Version: 1.0
Generator: maturin (1.4.0)
Root-Is-Purelib: false
Tag: py3-none-manylinux_2_17_x86_64
Tag: py3-none-manylinux2014_x86_64

RECORD

Path Digest Size
sourmash/signature.py sha256=auMm5wAY1MM9EDkXQ5z9hpFIU1jpK-n8lEe81nK9_oU 14970
sourmash/utils.py sha256=iOxcci3uaJikM9aFZtxY7OQK2NbrPdEF2VXjhuuq1DY 2069
sourmash/exceptions.py sha256=ekvxCnEVv1Qbgq06Hk5EwT6AXAI6vkRqNW2vYoAcphU 1982
sourmash/fig.py sha256=JAZhJ3fRYiOcgUsHERrwOTUBVYWxWSWbEFQMW3iNEsE 2382
sourmash/manifest.py sha256=JlY8t7cPmqX96tE76RbaG5hgqRvg9U1Qo9v71ZVLTdo 11276
sourmash/hll.py sha256=U5_wIy-oVwBG-c_ZUz1_gaLOmTa5L67IO5nDV6Ax2Rc 3757
sourmash/__main__.py sha256=oXdJY9XydvLhw0lWWZiPkH6-FNB0-yRus7Yq_7KIzT0 572
sourmash/minhash.py sha256=HifBSyfbuOC0avXEmxk_tKi6UXBCwSeEdMVQ2w-C9t8 40321
sourmash/command_compute.py sha256=Uko-mLFMw_b5KJdS2ZeZ7JjX0MEbAd5OGCCbgvAbYag 18214
sourmash/compare.py sha256=T08xmqQp3-ore_ScGAcahE7GTv-wCLEq-xbIOykI6P0 13422
sourmash/sbt.py sha256=CveJEw6m5bSSTTXNuqTCLj9XXnZBkR8Fr2UTnmSlYws 51064
sourmash/logging.py sha256=iN_CjvUFof6Zr9eb62EbzefeKVdyrF9lJ7I2uGptIxk 3899
sourmash/plugins.py sha256=iaGb9F1cggF4PkdQl0cqZidEqyEfGvKKEnRZ7duqK_U 6305
sourmash/save_load.py sha256=y5F75reB7IGg1ApTMp1V-duvw2CXIHwATvAqiguChiE 15697
sourmash/sbt_storage.py sha256=zaeWAyKYCDCb_FVz3HZisIW1hCGsqE_Uz9Gb34kH7ek 15610
sourmash/np_utils.py sha256=A5p26-ikD6SwWk69sTpVwbptB1tFocnIjdh-S89w6wc 826
sourmash/nodegraph.py sha256=wpIglWsScf6nh4Jr3hXWHP9ha7Z2uuuTXbPw1i-44Pg 5458
sourmash/command_sketch.py sha256=1iohBNqKUgsTc3vRATnDYyRCHx0EmXDuaa-3IJSXvEg 21988
sourmash/sbtmh.py sha256=k6S-vLTbSpbNxgZ6igRR-nWQD62zp8Ml_Dq5mWtZEjg 2162
sourmash/sketchcomparison.py sha256=Z1vq_jwS5nqp6D8rMu-64vvfkOnjJ_WuhZNfVOfjP_Q 9703
sourmash/picklist.py sha256=pO6fjLfrK9nNJFcrwvChaxyNab_Jnem1kUyuBm_DPYg 10893
sourmash/distance_utils.py sha256=0CCBL5tKyEy9f_iLugXBjlivsGpQtwoSBoS7UVKfq-8 13886
sourmash/commands.py sha256=Ny-V2YG3Oe8h07iJZ-_5nbxyZhnclMqZM_EnjdeuSak 59350
sourmash/search.py sha256=0RdS2BQ-VPrNwmaFJ_AyjX20DjdAkzvTjILTnnBvhp0 33901
sourmash/sourmash_args.py sha256=m3FFZag8J2v8sOaEyw8zVfas2SOzyNodW-7MeHZC8E8 25637
sourmash/sqlite_utils.py sha256=GNWHni9HQnrRJ-Ec-RI7fTVoAsxrRFcP8aPOw1s37DQ 2403
sourmash/__init__.py sha256=e4KumOC-rUfSTdTCuMA2KZgJuyQbM2N0UmBjRW4WwNA 3558
sourmash/_lowlevel/native.so sha256=r5SjM0bihBVyZXY2W8HJKlxvkfDj5ZpVWWTVvnpNipo 6731432
sourmash/_lowlevel/__init__.py sha256=hsVZR7agC05B2LKh1o3-Xj95Uziyiy2NP0_kS0aEM4k 136
sourmash/_lowlevel/ffi.py sha256=u8cyV_2XebPiS7hdt695evGmgh24A1-V4FDvBYCAKYc 17519
sourmash/tax/__main__.py sha256=H__mQ4Lp1e96Boerf9M-3Avq3o2O1gQ4zCjvQWhkOX4 22872
sourmash/tax/tax_utils.py sha256=LeCrF1tB-TOm-J92bYdOEBKLt8LKMyFcaJ2Ilp8SRU8 106551
sourmash/tax/__init__.py sha256=jIB_A21BGC5AzbHLPMvWIWXNiwGf0NZP3t0w2gmtitA 27
sourmash/cli/utils.py sha256=qJ2k4Csrrf9KpuuQ4ZDX8qgY_zRH91RwwM0GgMf-a1A 8454
sourmash/cli/watch.py sha256=DV61j-yrcW__84Y-FSsQ-32azgDohTQ4QPgS5j3iwNs 1186
sourmash/cli/.gitignore sha256=MtrjBS8zHuNNYo71NXCbMBJZpF33x1IsTTXc9Jhz8As 13
sourmash/cli/compute.py sha256=W_YSmrPQ_3n8gfiIKrTTnBvKE8bq7TUxJc1t90EUAqQ 4877
sourmash/cli/multigather.py sha256=PcvJvSdR6V-PQkg1fHOd3Thlf3yZoy_3xFdYZ4YNUng 3705
sourmash/cli/categorize.py sha256=mQ6eSP_35GLhsw5DIsmH8CQZOaOfU4ZoMfO-wvC2h9I 1184
sourmash/cli/sbt_combine.py sha256=_CmNsrizqPwUoNnrUZW_rZr6xe4-fVPHe9ZPehl0ipA 453
sourmash/cli/compare.py sha256=hhio_kuPhypvZOhOMyT0QwZGbhBgc3CjwllYSS44zco 4119
sourmash/cli/gather.py sha256=-8B5sOt5Yadak3Aoq3VVMyOhrbDVCfgbVbUmH8YzW-k 6581
sourmash/cli/import_csv.py sha256=2ia9wnbzrPnd41jdyMsAdVwv7gGBmCFIc96mJv5CzfM 667
sourmash/cli/search.py sha256=ur3VgVtjy4iHEgONREWdf5D41lnmcFhtyqsmdSMxcmA 4483
sourmash/cli/info.py sha256=S-9qTQgRl7hPmGie4MH3uEsY5StD8qyJske1y_95yEQ 926
sourmash/cli/prefetch.py sha256=CFnEAo5jcDuOvSvpdNjVO41_i_YMxOoBfaTzlaHGvbI 2516
sourmash/cli/migrate.py sha256=JDYPx56JE8SEIKyQGhaSaz2dGQ7vQ8ZqeMHUK52OuRg 299
sourmash/cli/__init__.py sha256=XAAW0f_8o4CEPioEGdFSDsrmiHrcnoepwQ1xEOI9sUA 5629
sourmash/cli/plot.py sha256=PdJTPpLOdE2vp9mKl7QaCT5lM2O_d0gtKSfv5fRMGS4 2427
sourmash/cli/index.py sha256=jRqJ6tYjJxzeHWMYaNlxsb562c4lhFSZwIfffUORLeU 2827
sourmash/cli/sketch/translate.py sha256=KsBf_BKJMjsrISTDoa6qX75HM_dL12ib4TjqNjoRRE4 3347
sourmash/cli/sketch/protein.py sha256=3gphWiE7tYn26SRycDDFLR4X6TfNXYTlU6pWXcni7yU 3326
sourmash/cli/sketch/fromfile.py sha256=8ZQ-opBEYhTa3sm7z7WqEBWKQy9flnvvwxmOirfXEpY 2906
sourmash/cli/sketch/dna.py sha256=I39LIUG5ezIVEm2Vj0tT0Zx1NcJ3_vMaNQpu3xVKaiU 3152
sourmash/cli/sketch/__init__.py sha256=lIW9YJl3NnPDD6fGWjfqXgUhsckvs7yS5qY2575k-PQ 1250
sourmash/cli/scripts/__init__.py sha256=Dvq-VsulYGLzT0DB3e0Kyr_JZ24LfqbvlCDyzi54gUk 1706
sourmash/cli/tax/metagenome.py sha256=HxxB73vD37vCEoasM6WDAw_xJUSDFH7kZvfgSQrcxow 4651
sourmash/cli/tax/annotate.py sha256=BSHb5ADrNL7_o7Aiw8KkmfDPcJhTX19wUlPfTR8Zvxc 3051
sourmash/cli/tax/summarize.py sha256=23sy412yipcHZbKQVExzV43dGWz2YhpAYhf2T7jI1rg 2158
sourmash/cli/tax/genome.py sha256=UfVKv7shldgG5DUmUU4tf_vWHUGKhVrkghLuS_6pimM 5101
sourmash/cli/tax/prepare.py sha256=4CmMLF8dpdy7FhXCtagiwzOwB39sL1D-qqA4bN0q1ls 2080
sourmash/cli/tax/grep.py sha256=2_TuXR_hwTUYe4nUVWz08cwTFv8A2DQ9ddEA8YeJoLM 2559
sourmash/cli/tax/__init__.py sha256=2Qf9TRYdVXyVM-9cjU4ifhiDNJCGi0b6wVuZShdx4aE 1289
sourmash/cli/lca/compare_csv.py sha256=JWJ75YFTCaGGJbWWLd2PZjy3TW9zr1uvj-P5Pvc8OZM 1442
sourmash/cli/lca/rankinfo.py sha256=hW8u1lvf-4Q97VIjTGUWFxXCLtooaFUJFhuxMzCd9iY 722
sourmash/cli/lca/summarize.py sha256=CXkcW5aJR2itFp0FJhI3ECjdG-QLwIeKQHHIslg0dVk 1470
sourmash/cli/lca/classify.py sha256=w2PrG0U0WEy-xIqukOHlnPLi3MdD3CIdrfZsWA5_JJk 1414
sourmash/cli/lca/__init__.py sha256=WeOOXrgPBNkEniqlrRwkNzYO3c-AxTXr4arD0Vk-bzE 1186
sourmash/cli/lca/index.py sha256=4KY3gYXEZ8tukzuOjcWD-i0xjAcEJWUv_zBT7AHVKDM 2602
sourmash/cli/sig/export.py sha256=vUwgb4FF9UrumMztqfku4IDFwuJ7ur6Ghp-xtv9n0UA 1025
sourmash/cli/sig/inflate.py sha256=NzasUMVTOeIaN0xd3UHO6VFtay7LDDYbzDcqcIANuYk 925
sourmash/cli/sig/kmers.py sha256=n5zr-_lcJaTPrD89rQUsSfXt8e3jzGTabzlijc1GNzQ 3787
sourmash/cli/sig/downsample.py sha256=TbXlSckQJEeIr_HHGLhneL7l9tRxv5BIIEqwp24tuQo 1984
sourmash/cli/sig/fileinfo.py sha256=Qt8Iq-3Fgvfg5gfTK0D7SfymevoLFujbSJmknhIv32M 1173
sourmash/cli/sig/cat.py sha256=wgnhM4f_XV1i79N45PoANndtc4KzP8vdEx7sK3DM4Yg 1674
sourmash/cli/sig/manifest.py sha256=mn5dLFaWjbRWyPkbJ1Wa9KQ8icsVxZ4WgpqPgSz4oug 1610
sourmash/cli/sig/extract.py sha256=BWuli8y46-E-iRXLRVkFfxGuQ5oDrfyRyMxoocf5O8Y 2541
sourmash/cli/sig/merge.py sha256=WyQB9r5gAl4d_ijtcnb37gu2P9KoVH0tQjwaM9K_uYM 1914
sourmash/cli/sig/describe.py sha256=mMArl5vmg3HEmaMxzG0-6Kg7hJZSLZNHhDxB3SVRq-Q 1595
sourmash/cli/sig/rename.py sha256=bMJFtD8VY5Y70KTSg7fyR57BjO1jPZBWBRDkSKYUhks 1655
sourmash/cli/sig/check.py sha256=0YKwX2H7ZcYs4qnCkcZBjC1L3SfkjjnYy9G0kJID5t0 3141
sourmash/cli/sig/split.py sha256=ufh_GTwWu4xE7LRf-LbyqjwiAQphNG3XW172Ljhh_1c 2381
sourmash/cli/sig/collect.py sha256=U6cCJbpRfcECU9QlVeazp4myDzxixOAJ6j22xPes9uE 2573
sourmash/cli/sig/intersect.py sha256=qoHfjGzwkbV1No4BkcmYGsL6EuQ3E-QFtW0fshqx9SA 1828
sourmash/cli/sig/overlap.py sha256=Xjar3tE4hmOhhrgRjXAv2UnqDCMhx6U331IdmI-8dik 1427
sourmash/cli/sig/subtract.py sha256=NbpYky6QMiMfsMkm26K118WXr6omUcqPJszPl0TYsZE 1653
sourmash/cli/sig/grep.py sha256=xWYTUGGrBmDsOb5Jjh4oti8q0bkLE3BPP5Wv3n0iisk 3126
sourmash/cli/sig/filter.py sha256=cfjxurcw6vEI3PCy9I182K4Uq0aZojb_ZvVKnARqnuw 1911
sourmash/cli/sig/flatten.py sha256=mIne65n0p-axrMWSQhj2PssVbw4pzuqynU1N2hDKBzc 1687
sourmash/cli/sig/ingest.py sha256=c0v3lN1Xye-DzZcylJ3VuEbwooGG2LZ5s0MBGlfwhgs 1320
sourmash/cli/sig/__init__.py sha256=UZe2YqYbcC0KfMcwepw44-xjQ1KOc7oIyiXOaJXORg0 1613
sourmash/cli/storage/convert.py sha256=NB3bpG-LUGJyXifR_TP4bPXiVpsvy63CRUKrMTFjUPs 402
sourmash/cli/storage/__init__.py sha256=faQa3aBJcKrAD_rH2lI4zK28yeqFbsOH2mrRGoFYyXI 1106
sourmash/lca/command_rankinfo.py sha256=-crsL04dgMSjS-4Vf1wneXCSiRh_NT8P2YZRkYZ3PIE 2369
sourmash/lca/__main__.py sha256=NTV3FCn5-m-1bAF4y-BYgXUONYqhrQSjDljBIu8091M 1058
sourmash/lca/lca_utils.py sha256=ZsSmOSBit8QAqrTi6fmXUHplbR8Yfh5saY-Hvll5ciA 7286
sourmash/lca/command_summarize.py sha256=nFXSofs7luE3o2zc2xQ2z3Fr5t61oL04-qX5Gahnq3g 6607
sourmash/lca/lca_db.py sha256=9xSQkBy9o1M8AXLcYJ-cU3qSFWl_pjXHmO3UHixodOE 24340
sourmash/lca/command_classify.py sha256=yvfyHq1FYaJCT92WmAivs4LkotO_62WcyKwgIaIx5nI 5339
sourmash/lca/command_compare_csv.py sha256=uEXoZlX-_Z61HOCEWuL-977Gf13ZJP5YpTkoFcQMSBM 3271
sourmash/lca/command_index.py sha256=1Bt2kHh5oKIMt2EhLcyl6qO0yEkuG9i9CPS2S8Q4t_0 13312
sourmash/lca/__init__.py sha256=unDsQJ1pIsRiYzmtUfY_Q8eYNcYwReDWuUcofNpjYeg 422
sourmash/index/revindex.py sha256=ZwNfV7e4EDu90mEjRWyujep9MrVJXryxaYdKQ2GtNUA 8122
sourmash/index/sqlite_index.py sha256=A25bMBSVZU8iOyBqitBYF69Mh6_dsEwt86bGd2GAxIU 40172
sourmash/index/__init__.py sha256=w_nwNtSJWJr2zceLO9xgfOWavBbXTpRNg0FOSs3Fq8k 41557
sourmash/sig/__main__.py sha256=8CX3VIK3lMGF8bpUjEXegbuOscUaP5Xhe96vDN_1oPI 53171
sourmash/sig/grep.py sha256=_W5jl4rTH2UfYT0G_Cp1qyF3mNluKczx4989cJYdj5o 4563
sourmash/sig/__init__.py sha256=4rauEuEPCYbGM6lih_pyGqZX_rtPz1rrvGc2u7o6Wpc 81
sourmash-4.8.8.dist-info/RECORD — —
sourmash-4.8.8.dist-info/METADATA sha256=ReoAacp2AjYSAheshuqkesjOz2clnrthxbZN10bXVHc 9488
sourmash-4.8.8.dist-info/WHEEL sha256=sEEJQfGpxbCj3JR7gsYDcnl7E03PI3pSdbwS0W5ZGho 141
sourmash-4.8.8.dist-info/entry_points.txt sha256=-_qPsYliTzhxqwQrDiL4Mgbru1bZGK6Dmy3CXmjgRx4 50
sourmash-4.8.8.dist-info/license_files/LICENSE sha256=Je7wEi8qCMp09qoGPdeU7iiBCYmbhOBM9Ip5FCXhyYI 1889

entry_points.txt

[console_scripts]
sourmash = sourmash.__main__:main