spider-st

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0.1.45 spider_st-0.1.45-py3-none-any.whl

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Project: spider-st
Version: 0.1.45
Filename: spider_st-0.1.45-py3-none-any.whl
Download: [link]
Size: 154329
MD5: 1819cdcaa15ee734b4b0874301363a0e
SHA256: 3ac11ce916bb15ead476496d982178bd63645b178de8e0522c0022fad232d1a9
Uploaded: 2023-08-31 05:53:23 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: spider-st
Version: 0.1.45
Summary: Identifying spatially variable interactions
Author: Li Shiying
Author-Email: shiyingli7-c[at]my.cityu.edu.hk
Home-Page: https://github.com/deepomicslab/SPIDER
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
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Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 171 characters]

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top_level.txt

spider