Reverse Dependencies of tox
The following projects have a declared dependency on tox:
- napari-napari — A napari viewer of the napari viewer
- napari-nasa-samples — This napari plugin provides sample datasets from NASA.
- napari-nD-annotator — A toolbox for annotating objects one by one in nD
- napari-nd2-folder-viewer — Look through separate nd2 files in one viewer.
- napari-ndev — A collection of widgets to process images from start to finish--focused on neural development.
- napari-nibabel — Read access to some common neuroimaging file formats
- napari-nifti — A napari plugin for reading and writing NIFTI files that have the extension .nii or .nii.gz.
- napari-nlm — NLM (non local means) denoising
- napari-obj — A plugin to read .obj files
- napari-omaas — napari-OMAAS stands for Optical Mapping Acquisition and Analysis Software
- napari-openfibsem — OpenFIBSEM Applications
- napari-organoid-counter — A plugin to automatically count lung organoids
- napari-orientationpy — Napari plugin for the Orientationpy project.
- napari-parallel — Plugin to process images in parallel using several computers
- napari-patchcreator — A simple plugin to use with napari
- napari-pdr-reader — A reader plugin for Napari for PDS data powered by the PDR library
- napari-PHILOW — PHILOW is an interactive deep learning-based platform for 3D datasets
- napari-PICASSO — Blind fluorescence unmixing
- napari-pixel-correction — Plugin to correct manually pixel wrongly predicted on image by annotation
- napari-PixSeq — A Napari plugin for extracting time series traces from Single Molecule Localisation Microsocpy (SMLM) data.
- napari-plugin-devtools — napari plugin devtool
- napari-plugin-engine — napari plugin engine, fork of pluggy
- napari-points2regions — A napari plugin for Points2Regions
- napari-pointslayer-projection — This plugin creates a 2d projection of all your points.
- napari-potential-field-navigation — A simple plugin for trajectories visualisations in napari for lung navigation in CTs scans
- napari-power-spectrum — A simple plugin to get the power spectrum of frames of a stack image
- napari-power-widgets — Powerful widgets and type annotations for napari plugin widgets
- napari-pram — plugin for PRAM data annotation and processing
- napari-proofread-brainbow — proofreading Brainbow images with napari
- napari-psf-analysis — A plugin to analyse point spread functions (PSFs).
- napari-psf-simulator — A plugin for simulations of the Point Spread Function, with aberrations
- napari-pystackreg — Robust image registration for napari
- napari-qrcode — A napari plugin to generate QR-Codes
- napari-quoll — Resolution estimation for electron tomography
- napari-remove-objects — Right-click on objects to remove them in Napari.
- napari-result-stack — Widgets and type annotations for storing function results of any types
- napari-rioxarray — A rioxarray plugin for napari supporting GDAL raster datatypes
- napari-roi-manager — A ROI Manager Widget with an UI similar to ImageJ
- napari-roi-registration — A plugin to perform registration of regions-of-interests in time-lapse data.
- napari-sairyscan — Airyscan image reconstruction
- napari-sam — Segment anything with Meta AI's new SAM model!
- napari-SAM4IS — Create annotations for instance segmentation using Segment Anything models
- napari-sc3D-viewer — A plugin to visualize 3D single cell omics
- napari-sdeconv — 2D and 3D deconvolution
- napari-segment-anything — Napari plugin of Segment Anything Model (SAM)
- napari-segment-everything — A Napari SAM plugin to segment everything in your image (not just some things)
- napari-serialcellpose — A simple plugin to batch segment cells with cellpose
- napari-shape-odyssey — Analyze shapes of meshes
- napari-sif-reader — This is a simple wraper to read .sif format files from Andor Technology.
- napari-sift-registration — Simple plugin for SIFT keypoint detection, and affine registration with RANSAC, based on scikit-image
- napari-signal-selector — An interactive signal selector for napari, based on napari-matplotlib.
- napari-sim-processor — A plugin to process Structured Illumination Microscopy data with gpu acceleration
- napari-sim-SIMulator — A simple plugin to simulate raw image stacks for structured illumination microscopy (SIM).
- napari-simpleannotate — A simple plugin to label image
- napari-sketchpose — A segmentation plugin to adapt Omnipose implementation to partial labelling.
- napari-SMLMLAB — Napari widget for BP04 Practical
- napari-spacemouse — 3DConnexion SpaceMouse support for napari
- napari-splinedist — A napari SplineDist plugin
- napari-splineit — A napari plugin for spline manipulation
- napari-spofi — napari plugin to interactively train and test a StarDist model
- napari-spreadsheet — A spreadsheet widget for napari
- napari-stable-diffusion — A demo of stable diffusion in napari
- napari-steinpose — A plugin to process Imaging Mass Cytometry data with cellpose and steinbock
- napari-tiff — official napari tiff reader and writer.
- napari-tiledb-bioimg — Support reading and writing TileDB-Bioimaging image arrays within Napari
- napari-time-series-plotter — A Plugin for napari to visualize pixel values over the first dimension (time -> t+3D, t+2D) as graphs.
- napari-timestamper — A simple plugin to add a timestamp overlay to napari
- napari-tissuumaps — A plugin to export Napari projects to TissUUmaps.
- napari-tomocube-data-viewer — "A plugin to visualize three-dimensional data from Tomocube's microscopy"
- napari-tomodl — A plugin for optical projection tomography reconstruction with model-based neural networks.
- napari-tomotwin — Several tools for the work with TomoTwin
- napari-toothfairy-annotator — The plugin employed to annotate volumes employed in the ToothFairy 2 Challenge
- napari-tracing — A plugin to trace the brightest path between two points in an image
- napari-trackpy — Plugin to do trackpy particle tracking on microscopy data within napari
- napari-trait2d — A napari plugin for TRAIT2D, a software for quantitative analysis of single particle diffusion data
- napari-turing — A plugin to run simmple simulations of Turing patterns
- napari-tyssue — A napari plugin for use with the tyssue library
- napari-ufish — Deep learning-based FISH spot calling method.
- napari-ui-tracer — A plugin to help understand Napari UI components and check their source code definition
- napari-umap — A simple plugin to use with napari
- napari-unicell — universal cell segmentation models
- napari-validate-random-label-predictions — Validate separate instances of label predictions manually
- napari-vedo-bridge — Transfer mesh data between napari and vedo for interactive processing
- napari-vesicles-segmentation — A simple plugin to detect vesicles in cells images.
- napari-vodex — A napari plugin for VoDEx : Volumetric Data and Experiment Manager. Allows to load volumetric data based on experimental conditions.
- napari-woggle-opacity — Dynamically change the layer opacity in Napari.
- napari-workshop-browser — A plugin to browse and follow napari workshops
- napari-workshop-plugin — A plugin to demonstrate some concepts from the 2023 workshop on software development related to napari
- napari-yolo5-mitosis-detector — A simple plugin to use yolo5 for mitosis detection with napari
- napari-z-plotter — Interactively plot the image intensity profile along the depth axis of a 3D image dataset.
- napari-zulip — A simple plugin for interacting with Zulip from napari
- napas-qr-python — VietQR for python.
- napatrackmater — Import Trackmate XML files for Track Visualization and analysis in Napari.
- naren-api — A small python package
- nature — A python package for nature inspired algorithms
- naucse — Website for course materials
- nautilus-namecodes — Nautilus Filename Specification (nautilus-namecodes)
- ndd-test4p — Utilities for testing Python code
- ndd-utils4p — Utilities for Python code
- ndn4sid — A package to perform n4sid on nD systems