trtools

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6.0.1 trtools-6.0.1-py3-none-any.whl

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Project: trtools
Version: 6.0.1
Filename: trtools-6.0.1-py3-none-any.whl
Download: [link]
Size: 135536
MD5: e0c770393ab2a3322bea4763f414cf4b
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Uploaded: 2024-02-21 19:44:54 +0000

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METADATA

Metadata-Version: 2.1
Name: trtools
Version: 6.0.1
Summary: Toolkit for genome-wide analysis of STRs
Author: Melissa Gymrek
Author-Email: mgymrek[at]ucsd.edu
Home-Page: https://trtools.readthedocs.org
Project-Url: Documentation, https://trtools.readthedocs.org
Project-Url: Repository, https://github.com/gymrek-lab/trtools
License: MIT
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
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Requires-Dist: cyvcf2 (>=0.30.4)
Requires-Dist: importlib-metadata (>=3.0.0); python_version < "3.8"
Requires-Dist: matplotlib (>=3.1.2)
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Requires-Dist: pandas (>=1.2.0)
Requires-Dist: pyfaidx (>=0.5.6)
Requires-Dist: pysam (>=0.15.4)
Requires-Dist: scikit-learn (>=0.23.1)
Requires-Dist: scipy (>=1.3.3)
Requires-Dist: statsmodels (>=0.10.2)
Description-Content-Type: text/x-rst
[Description omitted; length: 10319 characters]

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entry_points.txt

associaTR = trtools.associaTR:run
compareSTR = trtools.compareSTR:run
dumpSTR = trtools.dumpSTR:run
mergeSTR = trtools.mergeSTR:run
prancSTR = trtools.prancSTR:run
qcSTR = trtools.qcSTR:run
simTR = trtools.simTR:run
statSTR = trtools.statSTR:run