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asTair

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3.3.2 asTair-3.3.2-py2.py3-none-any.whl

Wheel Details

Project: asTair
Version: 3.3.2
Filename: asTair-3.3.2-py2.py3-none-any.whl
Download: [link]
Size: 70863
MD5: b04f68bd70ae76ba5141701894331518
SHA256: 6518b1ab918e22b8dae53b5c09f85607f666657087353731fd7a961bbb1cf257
Uploaded: 2020-06-26 16:58:49 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: asTair
Version: 3.3.2
Summary: A tool for the analysis of bisulfite-free and base-resolution sequencing data generated with TET Assisted Pyridine borane Sequencing (TAPS), or other modified cytosine to thymine conversion methods (mCtoT). It also has some features for bisulfite sequencing data (unmodified cytosine to thymine conversion methods, CtoT).
Author: Gergana V. Velikova and Benjamin Schuster-Boeckler
Author-Email: gergana_velikova[at]yahoo.com
Home-Page: https://bitbucket.org/bsblabludwig/astair/
License: GPLv3
Keywords: TAPS taps cytosine caller methylation modification WGBS RRBS bisulfite epigenetics
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, < 4
Requires-Dist: Click (<8,>=7)
Requires-Dist: pysam (>=0.15.0)
Requires-Dist: pyahocorasick (<2,>=1)
Requires-Dist: numpy (<2,>=1)
Requires-Dist: matplotlib; extra == "plot"
Provides-Extra: plot
Description-Content-Type: text/markdown
[Description omitted; length: 10358 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.33.1)
Root-Is-Purelib: true
Tag: py2-none-any
Tag: py3-none-any

RECORD

Path Digest Size
astair/DNA_sequences_operations.py sha256=Z0qVvA3XjpstnanUmujK6W8OVPcsOExeYfDZAZwZGEM 1737
astair/__init__.py sha256=8zLGg-DfQhnDl2Ky0n-zXpN-8e-g7iR0AcaI4l4Vvpk 32
astair/aligner.py sha256=hlWH73NI8Mi-hZV4swxWYAKEZHRa6RLTxBp4gXduzCA 22125
astair/bam_file_parser.py sha256=YJvKNFimWvnCBPwutdqvRLY9I40u0uQ8iqIjyhrVXgE 1329
astair/caller.py sha256=wG7d3jQvIYt91zdyZRhRsGcmZsgQ9mW8TcgDlVAiTR0 32943
astair/cigar_search.py sha256=fUyemsaMmtQfPhrhzNnH3BnJMPhi0NUpxUqPO4zmpaM 3890
astair/context_search.py sha256=m-9z0rbPwIR8qthgH6pMn4he37vDQBvvicnOup24i4s 11996
astair/filter.py sha256=ZhCnsRG92aZa3JhsTzrZ_9av9oowKOzWEDPAIjlWWCU 8208
astair/finder.py sha256=_-eOVX10aG6HA2VE1x0zylGQqEpgwGdL-77oM8jtoK0 6756
astair/idbiaser.py sha256=huo-j3BA-sL-_4DOdZNJ4lY5R_o1ylwzsfSscxDSEOw 46631
astair/mbias.py sha256=F5T2dvVIpYBR1aKrZJwUgtrrKoD66mviej7cuXensL0 20331
astair/phred.py sha256=lkIlO9W2E7cS7k8wHhuNOrO5S6LXMVP7um83ORMxHnM 18048
astair/safe_division.py sha256=_HMloNKI8i0bMmX8vPxX94Bhs9KRQyCTp8bFSe6DNOI 842
astair/simple_fasta_parser.py sha256=vIaJKkLeXk3DM1LEOM7TfUCItEr3OJN1Efd9IWRvXrE 9381
astair/simulator.py sha256=DjIZeFUdd4jTgyoQW2MpDNU542PVV2MkggAoFmCR4Us 34113
astair/statistics_summary.py sha256=GOZFps1FUijCG8Fm_F6UrDpKZcSoEmzhgnPJIjvHLX4 566
astair/summary.py sha256=_u_3nH4pk8TsXpP1RX_Jts6lfeTjElk1lRsOVaqgf8c 14565
astair/vcf_reader.py sha256=K_8qXnVSF3zQtnlXvckCD2IIczRgRI1PE26wCSwJJcE 4114
astair/version.py sha256=ljnJCYxaT-9Q47JZlNplo0KcLdOZrB0woIJhPq11pD0 22
scripts/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scripts/run.py sha256=yvkbP_4PEMOryIZ-tk-9s7HWIzYdkb1lTdUalDQdgho 1522
asTair-3.3.2.dist-info/LICENSE.txt sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY 35149
asTair-3.3.2.dist-info/METADATA sha256=-d6fHAYqlOHnh77vf27wf6dNF1HJVnz0-UY8RrcdyDc 11641
asTair-3.3.2.dist-info/WHEEL sha256=HX-v9-noUkyUoxyZ1PMSuS7auUxDAR4VBdoYLqD0xws 110
asTair-3.3.2.dist-info/entry_points.txt sha256=aZcDX__NozCk9ubSgECRqOBPt2qy0mpoM1SILV9W8XQ 44
asTair-3.3.2.dist-info/top_level.txt sha256=c6IVrm1HzvZbuoRcOJjff53LGB-RPxXonyFXOptttNU 15
asTair-3.3.2.dist-info/RECORD — —

top_level.txt

astair
scripts

entry_points.txt

[console_scripts]
astair = scripts.run:cli