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bam-filter

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1.4.5 bam_filter-1.4.5-py2.py3-none-any.whl

Wheel Details

Project: bam-filter
Version: 1.4.5
Filename: bam_filter-1.4.5-py2.py3-none-any.whl
Download: [link]
Size: 43796
MD5: b9f7a63fc8415aba2c818bd8afd76b5f
SHA256: 443e71959cad614b40bcd4f298cca22ace46be5ae61ecf85a054c0dbea58a304
Uploaded: 2024-03-26 16:22:59 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: bam-filter
Version: 1.4.5
Summary: A simple tool to filter references from a BAM file using different filter types
Author: Antonio Fernandez-Guerra
Author-Email: antonio[at]metagenomics.eu
Home-Page: https://github.com/genomewalker/bam-filter
License: GNUv3
Keywords: bam-filter
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Requires-Dist: Cython (>=0.29.24)
Requires-Dist: pandas (>=1.3.3)
Requires-Dist: scipy (>=1.9.0)
Requires-Dist: tqdm (>=4.64.1)
Requires-Dist: pysam (>=0.17.0)
Requires-Dist: numpy (>1.24)
Requires-Dist: pyrle (>=0.0.31)
Requires-Dist: sorted-nearest (>=0.0.38)
Requires-Dist: pyranges (>=0.0.118)
Requires-Dist: kneed (>=0.8.1)
Requires-Dist: matplotlib (>=3.6.0)
Requires-Dist: taxopy (>=0.12.0)
Requires-Dist: python-datatable (>=1.1.3)
Requires-Dist: networkx (>=3.2.1)
License-File: LICENSE
[No description]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.43.0)
Root-Is-Purelib: true
Tag: py2-none-any
Tag: py3-none-any

RECORD

Path Digest Size
bam_filter/__init__.py sha256=t9KZdp_DIvv91kyAlbqfXkrky_63qicYujvE-nd8xlM 93
bam_filter/__main__.py sha256=EWUo7wN8LJkSPHvZlJ5EKxrU7Cpm_eWL3rvYqcDmzb4 1523
bam_filter/_version.py sha256=0vTiJwh_cQ_luUl-gAII_JBzxVdBBBGCoAZ7XXr9KuE 497
bam_filter/entropy.py sha256=GsQP84sjCGo88lPWN8X8020XxkqaFEmhgOzqZ0WVDcE 6414
bam_filter/filter.py sha256=og31-W1HUHjQpoRBjv4C2rjaVp8azTYJCqc6QaSKK_c 9535
bam_filter/lca.py sha256=FmczKzWrEG3uze6u0RIJY4ELEnxxM5COykVpSJxu3HI 23868
bam_filter/reassign.py sha256=dtrN7W1Lcnz4u3fPdFdwMA7FTi2sIaLAX_wOQkotrU4 38887
bam_filter/sam_utils.py sha256=Q_pzIf48tcw3w9kTUqOhYyTKsLgRNLjHgFzZLpWXVC8 50137
bam_filter/utils.py sha256=3pIGqXsnQJIppsfHw09UoeQRZI4lBnw5-KLfOypr_rw 43631
bam_filter-1.4.5.dist-info/LICENSE sha256=FhLv2iFNLLOs8rCjlC7lHr1-pZ4UvS7cETEr1hQ5q-0 1575
bam_filter-1.4.5.dist-info/METADATA sha256=X0JGWUhShFFaqVdfXMDjrANti9PrPcKwjCAFT6QYLQk 950
bam_filter-1.4.5.dist-info/WHEEL sha256=DZajD4pwLWue70CAfc7YaxT1wLUciNBvN_TTcvXpltE 110
bam_filter-1.4.5.dist-info/entry_points.txt sha256=9aU_1CG5QQh3Xm82IKSFdniKToHbYTtchZtKfklctRY 56
bam_filter-1.4.5.dist-info/top_level.txt sha256=zsOBPiyzc9GmQfMXHAg_QNqJX-q97uwdae7tm2WDDFo 11
bam_filter-1.4.5.dist-info/RECORD — —

top_level.txt

bam_filter

entry_points.txt

[console_scripts]
filterBAM = bam_filter.__main__:main