Wheelodex » Projects » biosimulator-processes

biosimulator-processes

View on PyPI — Reverse Dependencies (0)

0.1.2 biosimulator_processes-0.1.2-py3-none-any.whl

Wheel Details

Project: biosimulator-processes
Version: 0.1.2
Filename: biosimulator_processes-0.1.2-py3-none-any.whl
Download: [link]
Size: 88774
MD5: 8b66fc219694e8ae02c545b07994339c
SHA256: 4c1cd255b4bb41a334dc103906a587aa3297c982546d39ee14690312acd0ad21
Uploaded: 2024-08-19 15:45:26 +0000

dist-info

METADATA · WHEEL · RECORD

METADATA

Metadata-Version: 2.1
Name: biosimulator-processes
Version: 0.1.2
Summary: Core implementations of process-bigraph.composite.Process aligning with BioSimulators simulator tools.
Author: Alex Patrie
Author-Email: alexanderpatrie[at]gmail.com
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Requires-Python: >=3.10
Requires-Dist: amici (<0.26.0,>=0.25.1); extra == "simulators"
Requires-Dist: bigraph-builder (<0.0.5,>=0.0.4)
Requires-Dist: bigraph-schema (<0.0.39,>=0.0.38)
Requires-Dist: bigraph-viz (<0.0.34,>=0.0.33)
Requires-Dist: cobra (<0.30.0,>=0.29.0)
Requires-Dist: copasi-basico (<0.70,>=0.69); extra == "simulators"
Requires-Dist: docker (<8.0.0,>=7.1.0)
Requires-Dist: h5py (<4.0.0,>=3.11.0)
Requires-Dist: jupyterlab (<5.0.0,>=4.2.1)
Requires-Dist: notebook (<8.0.0,>=7.2.0)
Requires-Dist: numpy (<2.0.0,>=1.26.4)
Requires-Dist: process-bigraph (<0.0.20,>=0.0.19)
Requires-Dist: pydantic (<3.0.0,>=2.7.2)
Requires-Dist: python-libsbml (<6.0.0,>=5.20.2)
Requires-Dist: pyyaml (<7.0.0,>=6.0.1)
Requires-Dist: seaborn (<0.14.0,>=0.13.2)
Requires-Dist: smoldyn[simulariumio]; extra == "simulators"
Requires-Dist: tellurium (<3.0.0,>=2.2.10); extra == "simulators"
Requires-Dist: termcolor (<3.0.0,>=2.4.0)
Requires-Dist: toml (<0.11.0,>=0.10.2)
Provides-Extra: simulators
Description-Content-Type: text/markdown
[Description omitted; length: 3983 characters]

WHEEL

Wheel-Version: 1.0
Generator: poetry-core 1.9.0
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
biosimulator_processes/_VERSION sha256=KXtQ8IOG01Ifj9ry94642dCs30UtLmFZaQX7o3IIx5I 6
biosimulator_processes/__init__.py sha256=-7zK4xIucnM1yuT5SUJ4YgsdZRKsIWyH8x35PwtAT8w 2086
biosimulator_processes/api/README.md sha256=CO5S-_39Xxu62DpZBQ0Z8oMF6YynQku-ObScEtIHuUA 119
biosimulator_processes/api/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biosimulator_processes/api/build.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biosimulator_processes/api/compare.py sha256=z4PcYFmQIuWtuIKZLpW3ZmvM4BD9LjoFPcoIr8da0Xg 12613
biosimulator_processes/api/instance.py sha256=7mxiu-gRt20QiBPkwhPyL2WaNR4ilGBQG93DnGKipdE 5542
biosimulator_processes/api/results.py sha256=CDcTzdmESrThtdV4ChepO2tuD0JKtmpkC6lf3ktDspQ 1700
biosimulator_processes/api/run.py sha256=ZnlvdrT0fypUnfHjUZOcw9a4C1nVfr52SUWmPJPY4bs 1862
biosimulator_processes/api/verify.py sha256=GQkB4lmyutVmNV5GMe4J1886L3TL_7_aooDH_4cu0lQ 8374
biosimulator_processes/biosimulator_builder.py sha256=Wki_OopfPhfIduaBO66ppvpYVvHq5rhE1rViaqjhCwU 9769
biosimulator_processes/containers/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biosimulator_processes/containers/exec.py sha256=7DV_U5BaUGc1_9ljtFapT3J6EOi8UmnCSE7yj6OSVlA 4717
biosimulator_processes/containers/io.py sha256=hgUNLowN73pcLkHG_T6hC_w7L1u2Ar7B8kku0RJwNmM 615
biosimulator_processes/data_model/__init__.py sha256=boLEPY5CuV2Qt0Wy7QwO6LZz9XV6C7wVDr76GA3kJ4U 947
biosimulator_processes/data_model/compare_data_model.py sha256=ItfA_nzD33bxbACu4i3P0Q-eu0DXrHYAiOx61GXftHY 16006
biosimulator_processes/data_model/sed_data_model.py sha256=3erg5NCKYd_6LLgnBg3OHcE_ruS33A0y9J2Q1x6P_Cg 15025
biosimulator_processes/data_model/service_data_model.py sha256=dQ-kog1WDeA007D60tk_cDTfxYM-ZAJmvjkV8cH1ID0 964
biosimulator_processes/data_model/verify_data_model.py sha256=sc3ODyHqQ4NYjkzJz8vH5NRZAtbeQRUxpgRgR6ZGR6U 993
biosimulator_processes/execute.py sha256=YOp6oVorF7hHPkyLZVSgCMxuVCGOvGBYyl84unqB-dg 1884
biosimulator_processes/experiments/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biosimulator_processes/experiments/parameter_optimization.py sha256=jZxiUyppZNRYbed3Rg67orgBS-Z59_r6n4wM2K-_vTI 966
biosimulator_processes/experiments/parameter_scan.py sha256=o_9Q7pFmLEzmk1bCwR7XszGaB676xDGLCIbTp_vqNNs 3256
biosimulator_processes/experiments/predict.py sha256=RbSPPP8rlARhpm9Te8q3ih1_CMyb5letBh2bWR0JyIw 2911
biosimulator_processes/helpers.py sha256=V65wuVzCbDCkfEdK44tVHgwlKIEyLyE97Msk58xobFY 17001
biosimulator_processes/io.py sha256=9hHKW9X4WEhFMCHSj-JpIMaNnXiL035ThTSuEbLkw3c 5154
biosimulator_processes/processes/.DS_Store sha256=1lFlJ5EFymdzGAUAaI30vcaaLHt3F1LwpG7xILf9jsM 6148
biosimulator_processes/processes/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biosimulator_processes/processes/amici_process.py sha256=dtqkFVC8iV1GydX40UgbdWZQ6TxBSehJSTINluI_7sM 11729
biosimulator_processes/processes/cobra_process.py sha256=ux-eiPLZxjLbQDSMW-_QbgSkTNmCES37tfHuObybNzQ 4978
biosimulator_processes/processes/copasi_process.py sha256=-waCywWmqpyxOg-bTYBrMlRbTKrCDch4h0TyG1X8hN0 18031
biosimulator_processes/processes/qiskit_process.py sha256=sfaubSagadspjlIaeiG7QxhU9D5_ryHpvM0T7ipr_Z0 8518
biosimulator_processes/processes/sed_process.py sha256=zDLU87f9jk2Rs5_l5UhjmVOzhVVNKbQEF28W3aGrzQM 934
biosimulator_processes/processes/smoldyn_process.py sha256=lWRW0cIlkHK-XWw405mehOC8whwsHg91aRHlUtnQnvQ 18061
biosimulator_processes/processes/tellurium_process.py sha256=PE55955xalgxFsbjW4urAKrYY3kIdlYhkVNtP-S2iPo 11836
biosimulator_processes/processes/utc_process.py sha256=acsO_SW4_OC1LvZRdfC_BLt3ppsOywWCB1sxsuuDj5k 8823
biosimulator_processes/services/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biosimulator_processes/services/rest_service.py sha256=8nI-U4ECcaQx6njsTweatRUh0oFn3L__43wnAwk89R8 7800
biosimulator_processes/simularium_utils.py sha256=oV2KO5bpa-Bwfi3byzbkuh7Lw-vZakyC73752QSfTmY 5993
biosimulator_processes/steps/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biosimulator_processes/steps/bio_compose.py sha256=CrcouvjUYXv_yOHgByobFxZkblp3hXkHfEMwkh5OX4g 20896
biosimulator_processes/steps/comparator_step.py sha256=-8l2XpNVcJjORPrB_kbX_3SSst18ZxFpx2kSnYQh7hE 2558
biosimulator_processes/steps/ode_simulation.py sha256=jB06ukH9RM2hcCDOhdbpbrqKLc_1tbwplvSK6z4KUM0 16251
biosimulator_processes/steps/parameter_scan.py sha256=ug2Q-ZilbjLOJ_mrJbZeosFR1ME8Z7I0_jy7gtI9x1I 4007
biosimulator_processes/steps/viz.py sha256=VzniFwsrRHXxchXromAapE_U5N7Dgemc2bt-DpMAzkw 8777
biosimulator_processes-0.1.2.dist-info/AUTHORS.md sha256=5SuCQwcMr5IJUNo5x6CjvUMv2dOAo4hZ5t_Db9zxWME 143
biosimulator_processes-0.1.2.dist-info/LICENSE sha256=sF9SV-O54AFkJTMLiJaQw0Ngd4QC7nAkzLV3QBIYnC0 11358
biosimulator_processes-0.1.2.dist-info/METADATA sha256=vWC8fMCv409vkVBoYigVefCEk0C1qVBcmUp7EFRnuik 5458
biosimulator_processes-0.1.2.dist-info/WHEEL sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg 88
biosimulator_processes-0.1.2.dist-info/RECORD — —