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0.2.1 cryoemservices-0.2.1-py3-none-any.whl

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Project: cryoemservices
Version: 0.2.1
Filename: cryoemservices-0.2.1-py3-none-any.whl
Download: [link]
Size: 114062
MD5: 076995adc0517b3e5115884a15ab789c
SHA256: 1a11d1fda98c47fe39f87026dec168792b08cafbc9b7af6ccd35597f9edceec7
Uploaded: 2024-04-08 10:56:03 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: cryoemservices
Version: 0.2.1
Summary: Services for CryoEM processing
Author: Diamond Light Source - Data Analysis et al.
Author-Email: dataanalysis[at]diamond.ac.uk
Project-Url: GitHub, https://github.com/DiamondLightSource/cryoem-services
Project-Url: Bug-Tracker, https://github.com/DiamondLightSource/cryoem-services/issues
License: BSD 3-Clause
Keywords: cryoem-services
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Requires-Python: >=3.8
Requires-Dist: gemmi (==0.6.5)
Requires-Dist: healpy
Requires-Dist: htcondor
Requires-Dist: icebreaker-em
Requires-Dist: importlib-metadata
Requires-Dist: ispyb
Requires-Dist: marshmallow-sqlalchemy
Requires-Dist: mrcfile
Requires-Dist: numpy
Requires-Dist: pillow
Requires-Dist: plotly
Requires-Dist: pydantic (==1.10.7)
Requires-Dist: starfile
Requires-Dist: stomp-py (==8.1.0)
Requires-Dist: workflows
Requires-Dist: zocalo (==0.30.2)
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 4838 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.43.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
cryoemservices/__init__.py sha256=2_rJo9exZikqsdlnnadgaBESrbEp4XE1dag7hqFQasY 58
cryoemservices/cli/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cryoemservices/cli/resubmit_wrapper.py sha256=bGveO1fhXPdBwj-5hHbuymCpc6DFfXdRCyNiLuqNvoU 1389
cryoemservices/pipeliner_plugins/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cryoemservices/pipeliner_plugins/combine_star_files.py sha256=YqqJ8b1mP5fWGDWyRfpOlzdRCBWfsoCilLyvv4_0qs8 8911
cryoemservices/pipeliner_plugins/combine_star_job.py sha256=B6m8875XhkLcli33DXZnoi1qwtxDnZA_oGLpa74A85w 6166
cryoemservices/pipeliner_plugins/reextract.py sha256=a6YJ-gxFRSYT-avZJPNfC4VCVfGx7TImSxI8sHEkyRo 12590
cryoemservices/services/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cryoemservices/services/bfactor_setup.py sha256=I1kdbiA4pGukIf5DBGLoN87pVdJfRSK9XxpS7AkeNLQ 8080
cryoemservices/services/cluster_submission.py sha256=-xl6ryoF2KrVgfvUfKpKGow-PLGbhVXEiF1kntnW-Dc 8213
cryoemservices/services/cryolo.py sha256=AAdH8C4Mb1uNt-yYvRKcDmPcDodPZr2EAF38PftCfkA 15859
cryoemservices/services/ctffind.py sha256=-L-20oJKcpw0avG5RHG2wrx6s0A35gXVcvHuZtdnyzw 13030
cryoemservices/services/denoise_iris.py sha256=wJn-s5jjQ0p9y0LUuaaNoPg1IyW_SzTGx9sARknixGo 11956
cryoemservices/services/extract.py sha256=D2wGgzM6OJWCrl_AXCNIsip_YSFzEuTKwvYN3pO767I 17110
cryoemservices/services/extract_class.py sha256=qy0JtaoZDDBVadX-a2TWgCXfLT21eKZH0yMMkJZPXVo 22665
cryoemservices/services/icebreaker.py sha256=DUQ21b81zVhn1Ss5h-6Byt8zrloPPsR4vq6yeZ2YI9w 21270
cryoemservices/services/images.py sha256=ycX1a2fkUX3BsfIu_v-2sSsXFeqpQKSaw1HKkWbkgk4 3550
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cryoemservices/services/ispyb.py sha256=joAvbj9c1lL8kB9W-7aORSPb5y83dpSJwgZruOladPg 46671
cryoemservices/services/ispyb_buffer.py sha256=6Kw_UsxdMMOG_Ruf5l6melyLcSCrDy3j7T9bafQAI4k 3625
cryoemservices/services/motioncorr.py sha256=2souwiX2FeHgoiGeT_NfLqL7UcUsNr8QQv1IrznH5TA 27255
cryoemservices/services/motioncorr_slurm.py sha256=GWgHUcjxAlycfm_gWcQFy_NCa04bu5sYUxnJVOA0vus 12594
cryoemservices/services/node_creator.py sha256=scOlyvItgNVPSmj1qkA8WUCrxmHW7O9iDp2mAfHnCTE 14713
cryoemservices/services/postprocess.py sha256=OyRD3LBM3LMRW_aFv77EkjGHb7NSGggdJ1xemjg2olw 14513
cryoemservices/services/select_classes.py sha256=DRCDyYBfPYXmuy2DjYMj-kxZsXvCG90gbNpBoYV8vw4 21216
cryoemservices/services/select_particles.py sha256=biA9ln3Mb50vZrFHIRsVL1On-o2x_G070J8OaxfOEeU 11906
cryoemservices/services/tomo_align.py sha256=bHUUYMTwj1OTYFMrrdp1vLfBYq31Np33eh9OYoTgzkI 22102
cryoemservices/services/tomo_align_iris.py sha256=BpP_0bf2FuJYDSaL7S3M0wKM5lKB-_3S6W4w_U8qZ6E 8533
cryoemservices/util/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cryoemservices/util/dispatcher_tools.py sha256=g10LXdHqSUbIvXQ-zfb-piu9JB4JQpJXsMCxH2bS7YI 8003
cryoemservices/util/spa_output_files.py sha256=RyQmzrLQetnE1eTxrpu9FunVB9ENb9ElHmf4hFt19KI 12638
cryoemservices/util/spa_relion_service_options.py sha256=_r6KnHDkI6-EM4alznC9xm6Tos2yTfvJl4cWtYaTOF4 10209
cryoemservices/wrappers/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cryoemservices/wrappers/class2d_wrapper.py sha256=PRcKnDVTdmgFdwN1hWsqLWwtif-l0C940mLInBVhECc 14864
cryoemservices/wrappers/class3d_wrapper.py sha256=DrCQEcr9uDkjwUShVXMOMkEtYnroEbwvVV9EdmZWbrQ 24235
cryoemservices/wrappers/refine3d_wrapper.py sha256=IKCW4fvJ-_J8Cl_8Dr7Cd5IudjxDLg-QrrJqBK4ME6s 13518
cryoemservices-0.2.1.dist-info/LICENSE sha256=09fyb_kjRDbLGar1cxQcdG-gRiW3GFqWn3113-MUgwI 1507
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cryoemservices-0.2.1.dist-info/RECORD — —

top_level.txt

cryoemservices

entry_points.txt

[ccpem_pipeliner.jobs]
combine_star_files_job = cryoemservices.pipeliner_plugins.combine_star_job:ProcessStarFiles
[console_scripts]
combine_star_files = cryoemservices.pipeliner_plugins.combine_star_files:main
cryoemservices.reextract = cryoemservices.pipeliner_plugins.reextract:run
cryoemservices.resubmit_wrapper = cryoemservices.cli.resubmit_wrapper:run
[cryoemservices.services.cluster.schedulers]
slurm = cryoemservices.services.cluster_submission:submit_to_slurm
[cryoemservices.services.images.plugins]
mrc_central_slice = cryoemservices.services.images_plugins:mrc_central_slice
mrc_to_apng = cryoemservices.services.images_plugins:mrc_to_apng
mrc_to_jpeg = cryoemservices.services.images_plugins:mrc_to_jpeg
picked_particles = cryoemservices.services.images_plugins:picked_particles
[workflows.services]
BFactor = cryoemservices.services.bfactor_setup:BFactor
CTFFind = cryoemservices.services.ctffind:CTFFind
ClusterSubmission = cryoemservices.services.cluster_submission:ClusterSubmission
CrYOLO = cryoemservices.services.cryolo:CrYOLO
DenoiseIris = cryoemservices.services.denoise_iris:DenoiseIris
Extract = cryoemservices.services.extract:Extract
ExtractClass = cryoemservices.services.extract_class:ExtractClass
ISPyB = cryoemservices.services.ispyb:EMISPyB
IceBreaker = cryoemservices.services.icebreaker:IceBreaker
Images = cryoemservices.services.images:Images
MotionCorr = cryoemservices.services.motioncorr:MotionCorr
MotionCorrSlurm = cryoemservices.services.motioncorr_slurm:MotionCorrSlurm
NodeCreator = cryoemservices.services.node_creator:NodeCreator
PostProcess = cryoemservices.services.postprocess:PostProcess
SelectClasses = cryoemservices.services.select_classes:SelectClasses
SelectParticles = cryoemservices.services.select_particles:SelectParticles
TomoAlign = cryoemservices.services.tomo_align:TomoAlign
TomoAlignIris = cryoemservices.services.tomo_align_iris:TomoAlignIris
[zocalo.services.dispatcher.filters]
ispyb = cryoemservices.util.dispatcher_tools:ispyb_filter
[zocalo.services.dispatcher.ready_for_processing]
ispyb = cryoemservices.util.dispatcher_tools:ready_for_processing
[zocalo.wrappers]
Class2D = cryoemservices.wrappers.class2d_wrapper:Class2DWrapper
Class3D = cryoemservices.wrappers.class3d_wrapper:Class3DWrapper
Refine3D = cryoemservices.wrappers.refine3d_wrapper:Refine3DWrapper