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elfragmentador

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0.57.0 elfragmentador-0.57.0-py3-none-any.whl

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Project: elfragmentador
Version: 0.57.0
Filename: elfragmentador-0.57.0-py3-none-any.whl
Download: [link]
Size: 48086
MD5: c4dcc5a25c7322c05a7f87ab481e158c
SHA256: 032052e3375a0f713bd68b6026013531ad4f22da870de1c52b5e427d8132ec3d
Uploaded: 2023-02-23 21:58:52 +0000

dist-info

METADATA · WHEEL · RECORD · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: elfragmentador
Version: 0.57.0
Summary: Predicts peptide fragmentations using transformers
Author: J. Sebastian Paez
Author-Email: jspaezp[at]gmail.com
Project-Url: Bug Tracker, https://github.com/jspaezp/elfragmentador/issues
License: Apache 2.0
Classifier: License :: Other/Proprietary License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Requires-Python: >=3.9,<3.11
Requires-Dist: loguru (<0.7.0,>=0.6.0)
Requires-Dist: lxml (<5.0.0,>=4.6.3)
Requires-Dist: ms2ml (<0.1.0,>=0.0.34)
Requires-Dist: networkx (<3.0.0,>=2.8.8)
Requires-Dist: numba (<0.57.0,>=0.56.2)
Requires-Dist: numpy (<2.0.0,>=1.23.2)
Requires-Dist: pandas (<2.0.0,>=1.0.0)
Requires-Dist: pyarrow (<10.0.0,>=9.0.0)
Requires-Dist: pyteomics (<5.0.0,>=4.4.2)
Requires-Dist: pytorch-lightning (<2.0.0,>=1.7.4)
Requires-Dist: torch (<2.0.0,>=1.13.1)
Requires-Dist: torchmetrics (<0.10.0,>=0.9.3)
Requires-Dist: uniplot (<0.8.0,>=0.7.0)
Requires-Dist: wandb (<0.14.0,>=0.13.0)
Description-Content-Type: text/markdown
[Description omitted; length: 5380 characters]

WHEEL

Wheel-Version: 1.0
Generator: poetry-core 1.3.2
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
elfragmentador/__init__.py sha256=iyAlf6toYjMak28CQu-Ln0KgXTXACVFa3N5QlFRtKaw 300
elfragmentador/cli.py sha256=xIthyQX8U8-7FivesP2S7l3hXr2sPRffQxFtem0Qcko 8223
elfragmentador/config/__init__.py sha256=zkr68KqN4FQvylApQH0uTZgqSgT2v3MlDTwOT904So4 284
elfragmentador/config/default_config.toml sha256=SwbuczftJyc5uhCM-CxXmbhQ-ZufCkcqHcwvv7h1unc 2334
elfragmentador/data/converter.py sha256=D6dCsj_E9usNYv5IH0TZJxAY0eQgNB1PmTRrDzZr7Tc 5350
elfragmentador/data/datamodules.py sha256=KnWhzSHvBbREkTbJuwKZnXKHi9rDFWBP-rjpVf-u_us 4599
elfragmentador/data/predictor.py sha256=_GhN77gMQYokmedyuFYPs1OPN4EW3beQ8qzRZsH8-tw 10240
elfragmentador/data/torch_datasets.py sha256=AhVbcwsUpfefPX5wjXygYFjSzeAcScPnHief2CgK0gw 5386
elfragmentador/math_utils.py sha256=_nSS208IyZw0-fY2c-2lyB_zFVO1DMoQURVG8ALNGeg 2708
elfragmentador/metrics.py sha256=Ut6TcWb121AL0_QAtcj4y2E12PMDZ3LV7k1j7akkM1Y 8345
elfragmentador/model/__init__.py sha256=d6pf1ko-NabQcuN6jT0Bk78c6T9rUpH24pTBQj1P4rc 27555
elfragmentador/model/ms_transformer_layers.py sha256=iYZS14HXr_yTiv37PMzVg-YdA_sySycX__zg5s26SeM 6289
elfragmentador/model/nn_encoding.py sha256=cwi0C0Y3tqd0wkuHUl9rCdZG7K00kkCBpO4nwNq90_I 10700
elfragmentador/model/peptransformer.py sha256=H91iWZOUEnbB8kCReh8Fx1BBjUfj9cbgYZdHGNu4lLM 5999
elfragmentador/model/transformer_layers.py sha256=9xLn0ZAJEDtNh_bJCUuFkMRQWaa9M4sA8Scsay9xH7s 5499
elfragmentador/model/visualization.py sha256=2bdG8r_bKVKBLEpYA3eIV_YIsaQjeFiC-T2M9DS3vko 7826
elfragmentador/named_batches.py sha256=nrnsqPyqdUvitB1wDJgPnxev3hE7hfz-iFyt3rysKvA 5134
elfragmentador/train.py sha256=TZ0moqH-yu8-7dsxGQjs_TUjEDCQF1uG3nIsip3iMho 4614
elfragmentador/utils.py sha256=fGStxsh_NcDT1c2J5m2q4WCMCGtiE5i58x4CauqOAsQ 1843
elfragmentador/version.py sha256=jEzBq20d6KMqnWEVC3u5hz5b_e-z_dW1-d_f-WWKZro 108
elfragmentador-0.57.0.dist-info/entry_points.txt sha256=U33y4bZ5Td1M5x2m5JIP_ezPy_KIpZx_QJSE8WQmo2k 62
elfragmentador-0.57.0.dist-info/LICENSE sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ 11357
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elfragmentador-0.57.0.dist-info/RECORD — —

entry_points.txt

[console_scripts]
elfragmentador = elfragmentador.cli:main_cli