Wheelodex » Projects » gene-normalizer

gene-normalizer

View on PyPI — Reverse Dependencies (6)

0.2.10 gene_normalizer-0.2.10-py3-none-any.whl

Wheel Details

Project: gene-normalizer
Version: 0.2.10
Filename: gene_normalizer-0.2.10-py3-none-any.whl
Download: [link]
Size: 62368
MD5: 92f5afbcaa1d865af8ea097f4156a76b
SHA256: 43e7c9751a58bad9805d95f5ede0537a6bb53e9862afc726d448404bfac87bad
Uploaded: 2023-07-21 14:51:33 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: gene-normalizer
Version: 0.2.10
Summary: VICC normalization routine for genes
Author: VICC
Author-Email: help[at]cancervariants.org
Home-Page: https://github.com/cancervariants/gene-normalization
Project-Url: Documentation, https://gene-normalizer.readthedocs.io/en/latest/
Project-Url: Changelog, https://github.com/cancervariants/gene-normalization/releases
Project-Url: Source, https://github.com/cancervariants/gene-normalization
Project-Url: Tracker, https://github.com/cancervariants/gene-normalization/issues
License: MIT
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Developers
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Requires-Python: >=3.8
Requires-Dist: boto3
Requires-Dist: click
Requires-Dist: fastapi
Requires-Dist: ga4gh.vrs (>=0.9.0.dev0)
Requires-Dist: ga4gh.vrsatile.pydantic (>=0.1.0.dev7)
Requires-Dist: pydantic
Requires-Dist: uvicorn
Requires-Dist: flake8; extra == "dev"
Requires-Dist: flake8-docstrings; extra == "dev"
Requires-Dist: ipykernel; extra == "dev"
Requires-Dist: pre-commit; extra == "dev"
Requires-Dist: furo (==2023.3.27); extra == "docs"
Requires-Dist: gravis (==0.1.0); extra == "docs"
Requires-Dist: sphinx-autobuild (==2021.3.14); extra == "docs"
Requires-Dist: sphinx-autodoc-typehints (==1.22.0); extra == "docs"
Requires-Dist: sphinx-copybutton (==0.5.2); extra == "docs"
Requires-Dist: sphinx (==6.1.3); extra == "docs"
Requires-Dist: sphinxcontrib-bibtex (==2.5.0); extra == "docs"
Requires-Dist: sphinxext-opengraph (==0.8.2); extra == "docs"
Requires-Dist: biocommons.seqrepo; extra == "etl"
Requires-Dist: gffutils; extra == "etl"
Requires-Dist: psycopg[binary]; extra == "pg"
Requires-Dist: mock; extra == "test"
Requires-Dist: pytest; extra == "test"
Requires-Dist: pytest-cov; extra == "test"
Provides-Extra: dev
Provides-Extra: docs
Provides-Extra: etl
Provides-Extra: pg
Provides-Extra: test
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 6819 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.37.1)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
gene/__init__.py sha256=N3cWq5Hk5z6HnA5rJG34K952BIoWk1Pst_lzMQKnHCE 2085
gene/cli.py sha256=bJYYzAeXo3DtJBC7Pv15RVqwMg4sj9YnwjA_dajGkLY 9021
gene/main.py sha256=Juf7YW74skF_nKuqee-n0sjAr4x2w_iU-DqKFAqv608 5805
gene/query.py sha256=C1Q1lNKTVLw28a-wQ0scQxm_ZJ9n9Rf-Rn4at8IS_Vg 28840
gene/schemas.py sha256=KSpLOYK2-o_60BY-yl0iG-Kq8lc9fTq9GtFt0UjiArw 31395
gene/version.py sha256=qdmB6jztE6Sk4sK3VxTyUg9MBGIOBX6hhIeh7YyFfuA 53
gene/database/__init__.py sha256=g0O5iiQjKGS4FA1GnOXodOC_wVuyWhus-WgNBa8FpTU 225
gene/database/database.py sha256=hg5LQH70uBAzHmenmTtD5UcfTD_uWjgLlVkAvY8IErk 11836
gene/database/dynamodb.py sha256=eeVOJ_a0aj48TaIXdK4kf3_He_FRI9xIV9bbmRYN9u8 21745
gene/database/postgresql.py sha256=yAryY-tO2559Siz5pQhdr6tR3OaZ6bfxZIYYwvPIiSs 29799
gene/database/postgresql/add_fkeys.sql sha256=adLK2ssuSvQ4UShNQGy4T-E9vekggQmmWZjIxOoYL_g 713
gene/database/postgresql/add_indexes.sql sha256=czELGut8KHBCOhRECywzrWhhy99g9o4ETSF3kQMTAhY 630
gene/database/postgresql/create_record_lookup_view.sql sha256=pVh_8wk7N4suGqP0hSeFPX9ZrvY8dfjRoZ33LsKDNwY 1269
gene/database/postgresql/create_tables.sql sha256=FV076TgbnTL01gdF5b24WNJbzKoz1uBwWpAAnrpl2h4 2028
gene/database/postgresql/delete_normalized_concepts.sql sha256=yCBYxYqzf2fWfBKtg6xlKXA_TqL_IWE6IW6zrZNGifE 960
gene/database/postgresql/drop_fkeys.sql sha256=rFT8u_dW3A5DidX0pwsBJYihI3ftRe7Xnu4-RySDKqE 383
gene/database/postgresql/drop_indexes.sql sha256=1KaKKg8kw06H_zjY75d7KfaG_t3LAJ6MzX-tIBx2IBg 381
gene/etl/__init__.py sha256=6l8GMExaAZPsjPXl8uAu2CPFTMoItdiUo7yWV49jQqg 175
gene/etl/base.py sha256=dkTyhH48L_m1KzS1YXJZgJgEREAEk3dv-HIL1Xy8dBE 5634
gene/etl/ensembl.py sha256=R6BzBvuYkutKGgS9yZFrhzfzskKJ0L68LugV1vnlvpw 9453
gene/etl/hgnc.py sha256=Uj1qIuKq5CW04vdIFxX8bkU771kkIU2ZwKoxQebk0os 11151
gene/etl/merge.py sha256=K2L3kO2lOhvfFy-njHJJrA1g4JSgq7ZaTh_PBRuBP5M 7732
gene/etl/ncbi.py sha256=wri9JTwiXBUZjcNrsKvXLrXSgfDqiV-lipUs5Ke4tEg 22985
gene/etl/vrs_locations/__init__.py sha256=_F5FxMMsQLBHUEcAQyFonIQPNJPZT2xkZf2iM1zEqG8 186
gene/etl/vrs_locations/chromosome_location.py sha256=DJ94AGb4_Cn87w7wnGHVBiwrdVbHdLFEZLOoV1W1Sa0 2797
gene/etl/vrs_locations/sequence_location.py sha256=Jy6644dKMQ-vjr-_zFLXvSTWhcu_N4RJzLgZc-OQ7kQ 1958
gene_normalizer-0.2.10.dist-info/LICENSE sha256=NdC2QWpW81Utzbtmwhc7uHXqawagl4Q6P3G5XosrRLI 1066
gene_normalizer-0.2.10.dist-info/METADATA sha256=xE4qLdt72lZQadj4Rix9mZEkSM7nhuxtkvlE2HN6RCA 9143
gene_normalizer-0.2.10.dist-info/WHEEL sha256=G16H4A3IeoQmnOrYV4ueZGKSjhipXx8zc8nu9FGlvMA 92
gene_normalizer-0.2.10.dist-info/entry_points.txt sha256=_Ar3vU7EAePUYtFEJhnYn1Rc4q1Y7WiBYimr6HyrgoA 201
gene_normalizer-0.2.10.dist-info/top_level.txt sha256=Elv6f5gXUJHX9xyTxOEayOhcegKi_sRtN4P0F2wd57w 5
gene_normalizer-0.2.10.dist-info/RECORD — —

top_level.txt

gene

entry_points.txt

[console_scripts]
gene_norm_check_db = gene.cli:check_db
gene_norm_dump = gene.cli:dump_database
gene_norm_update = gene.cli:update_normalizer_db
gene_norm_update_remote = gene.cli:update_from_remote