Reverse Dependencies of h5py
The following projects have a declared dependency on h5py:
- sciscripts — Scripts for controlling devices/running experiments/analyzing data
- scisoftpy — DAWN Python Extensions
- scLift — File read and write operations
- scMDCF — Aligned Cross-modal Integration and Characterization of Single-Cell Multiomic Data with Deep Contrastive Learning
- SCNIC — A tool for finding and summarizing modules of highly correlated observations in compositional data
- scnym — Semi supervised adversarial network networks for single cell classification
- sconce — Model Compresion Made Easy
- scope-ml — SCoPe: ZTF Source Classification Project
- score-models — A simple pytorch interface for score model and basic diffusion.
- scprep — scprep
- scProject — Transfer learning framework for single cell gene expression analysis in Python
- scqubits — scqubits: superconducting qubits in Python
- scquill — Approximate any single cell data set, saving >99% of memory and runtime.
- scrapi — no summary
- scri — Time-dependent functions of spin-weighted spherical harmonics on future null infinity
- scripro — Single-cell gene regulation network inference by large-scale data integration Pro
- scsims — Scalable, Interpretable Deep Learning for Single-Cell RNA-seq Classification
- scslat — A graph deep learning based tool to align single cell spatial omics data
- sctdl — no summary
- sctransfer — Python part for scRNA-seq transfer learning denoising tool SAVER-X
- scUNAGI — A Python package for UNAGI
- scvi — Single-cell Variational Inference
- scvi-tools — Deep probabilistic analysis of single-cell omics data.
- SDF — Work with Scientific Data Format files in Python
- sdssdb — SDSS product for database management
- seamlessf5 — Helpers for smoother transitioning to multi-read FAST5 files
- seapy-ocean — State Estimation and Analysis in PYthon
- seas — python Signal Extraction and Segmentation
- SEBAL — Python module for Surface Energy Balance Algorithm for Land
- secretflow — SecretFlow
- sed-processor — Single Event Data Frame Processor: Backend to handle photoelectron resolved datastreams
- segar — no summary
- segmentpy — Deep Learning Software for Tomography Segmentation
- seisbench — The seismological machine learning benchmark collection
- seisclient — Python package to request accurate 3D Greens' function and synthetic waveform from SeisCloud.
- seisgen — The theoretical seismic waveform generation tool
- SeisMIC — Seismological Monitoring using Interferometric Concepts
- SeismicMesh — 2D/3D serial and parallel triangular mesh generation for seismology
- seissolxdmf — A python reader for SeisSol xdmf output
- seissolxdmfwriter — A python writer for SeisSol xdmf output
- selectionfunctions — Uniform interface for the selection functions of astronomical surveys.
- semsis — A libary for semantic similarity search
- seq2seq-lstm — Sequence-to-sequence classifier based on LSTM with the simple sklearn-like interface
- seq2vec — A package to turn sequence of words into a fix-length representation vector
- seqp — Sequence persistence library
- seqvec — Embeeder tool for 'Modelling the Language of Life - Deep Learning Protein Sequences'
- serm — SERM is a high-performance data-driven gene expression recovery framework.
- serval-ml-commons — SerVal Machine learning commons is a tools box that ease the development of ML experiments at SerVal.
- sfaira — sfaira is a model and a data repository for single-cell data in a single python package.
- sfftk-rw — Toolkit for reading and writing EMDB-SFF files
- sgl2020 — Data Wrapper for SGL2020 Aeromagnetic Survey
- sgm-data — Module for loading, interpolating and plotting data taken at the SGM Beamline at the Canadian Light Source.
- shafts — Simultaneous building Height And FootprinT extraction from Sentinel Imagery
- shakecore — Shake events locating and focal mechanism analysis
- shakemap-modules — USGS Earthquake Impact ShakeMap Modules
- shamnet — Differentiable abundance matching
- shamo — A tool for electromagnetic modelling of the head and sensitivity analysis.
- shapeout — User interface for real-time deformability cytometry (RT-DC)
- shapeout2 — User interface for real-time deformability cytometry (RT-DC)
- shepherd-core — Programming- and CLI-Interface for the h5-dataformat of the Shepherd-Testbed
- shepherd-data — Programming- and CLI-Interface for the h5-dataformat of the Shepherd-Testbed
- sherlockpipe — Search for Hints of Exoplanets fRom Lightcurves Of spaCe based seeKers
- shesha — SHESHA is the python part of the COMPASS platform designed to meet the need of high-performance for the simulation of AO systems
- shetranio — A python package to complement the SHETran hydrological model.
- Shimmy — An API conversion tool providing Gymnasium and PettingZoo bindings for popular external reinforcement learning environments.
- show-h5 — Command-line interface to preview HDF5 files
- sidpy — Python utilities for storing, visualizing, and processing Spectroscopic and Imaging Data (SID)
- sigmond-scripts — Supporting functions for handling the c++ library sigmond
- signac — Manage large and heterogeneous data spaces on the file system.
- signal-pipes — Stream operation for processing of (physiological) signals
- SignalSnap — Spectra at your fingertips
- signatureanalyzer — Bayesian NMF methods for mutational signature analysis & transcriptomic profiling on GPUs (Getz Lab).
- silverlabnwb — Python tools for working with Silver Lab data in the NWB2 format
- silx — Software library for X-ray data analysis
- sim2bids — App to preprocess and convert simulation data
- Simba-UW-no-tf — Toolkit for computer classification of complex social behaviors in experimental animals
- Simba-UW-tf — Toolkit for computer classification of complex social behaviors in experimental animals
- Simba-UW-tf-dev — Toolkit for computer classification of complex social behaviors in experimental animals
- simbsig — A python package for out-of-core similarity search and dimensionality reduction
- simcardems — Simula Cardiac electromechanics solver
- simetuc — simetuc: Simulating Energy Transfer and Upconversion
- SimEx-Lite — The core package of the SIMEX platform providing the calculator interfaces.
- simfire — Fire simulator built in Python
- simframe — Framework for Scientific Simulations
- simhandler — Intelligent simulation handler for power system load flow simulations
- simim — Code for simulating the radio, sub-mm and FIR sky
- simmate — Simmate is a toolbox for computational materials research.
- simpa — Simulation and Image Processing for Photonics and Acoustics
- simpeg-drivers — Application to run SimPEG inversions with geoh5 files from Geoscience Analyst.
- simple-elmo — Handy library to work with pre-trained ELMo embeddings in TensorFlow
- simple-h5py — A simple wrapper for the h5py library.
- simplifiedmc — A CLI that simplifies the usage of MCMC methods.
- simsopt — Framework for optimizing stellarators
- simulai-toolkit — A Python package with data-driven pipelines for physics-informed machine learning
- simweights — Pure python library for calculating the weights of Monte Carlo simulation for IceCube.
- SingleCellExperiment — Container class for single-cell experiments
- singularitytechnologies.easymodelskeras — Easy to use Keras Machine Learning Model
- sinzident — Sinz Lab Neural System Identification Utilities
- SiQ3D — Deep Learning-based 3D single-cell imaging analysis pipeline for quantifying cell-cell interaction dynamics
- SiSo — no summary