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LRphase

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1.1.2 LRphase-1.1.2-py3-none-any.whl

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Project: LRphase
Version: 1.1.2
Filename: LRphase-1.1.2-py3-none-any.whl
Download: [link]
Size: 58996
MD5: 594279c37479df5227e1edfe17ab8727
SHA256: 77fa12fba6aa50a194b03e95332b5613a0290f313751c0a0f82f06315e558af2
Uploaded: 2023-04-12 17:05:05 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: LRphase
Version: 1.1.2
Summary: Phasing individual long reads using known haplotype information.
Author: Greg Farnum
Author-Email: gregfar[at]umich.edu
Home-Page: https://github.com/Boyle-Lab/LRphase.git
Project-Url: Issue Tracker, https://github.com/Boyle-Lab/LRphase/issues
License: MIT
Keywords: long-reads,phasing,haplotype
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: Implementation :: CPython
Classifier: Programming Language :: Python :: Implementation :: PyPy
Classifier: Intended Audience :: Science/Research
Classifier: Natural Language :: English
Classifier: Operating System :: Microsoft
Classifier: Operating System :: MacOS
Classifier: Operating System :: Unix
Classifier: Programming Language :: Python
Classifier: Topic :: Documentation
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Software Development :: Libraries :: Python Modules
Classifier: Topic :: Software Development :: Version Control :: Git
Requires-Python: >=3.7
Requires-Dist: pysam (>=0.16.0.1)
Requires-Dist: biopython (>=1.78)
Requires-Dist: pyliftover (>=0.4)
Requires-Dist: powerlaw (>=1.4.6)
Requires-Dist: numpy (>=1.20.1)
Requires-Dist: requests (>=2.26.0)
Requires-Dist: mappy; extra == "mappy"
Provides-Extra: mappy
Description-Content-Type: text/markdown
[Description omitted; length: 5935 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.36.2)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
LRphase/HeterozygousSites.py sha256=CCe_RGHLfCN90jFZaSat6vRtLqcPYG4qkzOWeZon8y8 21497
LRphase/InputData.py sha256=ecrAy-rZCEOwRWver6jDLChETsPyglXPSc-qrSb8chU 57539
LRphase/PhasableSample.py sha256=T3R6ElyONEjFgtggEeFfZjQHzZO5hfHZL0ATGPymMT4 14614
LRphase/PhaseSet.py sha256=Fiont8UCL0rb3lIjF0oSRIHUpbSHEN1vu-gr53KQ67k 38006
LRphase/PhasedRead.py sha256=6oQ4_fsCCEwtbSZvVa9t0U0vFuP_qTCvMNhFUUkJEQY 48416
LRphase/SimulatePhasedData.py sha256=Kj0jxUCMGRQPU0kRsR8lKD0bA0Np33OIFU7XmJnmCjg 23245
LRphase/__init__.py sha256=ksf7fsJqDFr4todlSFabtA6oJO_sNERPJfalnyOPGII 202
LRphase/__main__.py sha256=3hV1HGGULYvLfmlzEqkLHYYSOUcgGxuzdEX1eA1_Eh4 364
LRphase/cli.py sha256=321d0xHyPRxjcovtBIIbD3qH_xTGlVUfqroatGhWk2Y 64753
LRphase/urls.py sha256=cb3oum6MQ_rdvzlCi-TQmDTt0RGUkdsRGx7hnBgvc1o 4391
LRphase-1.1.2.dist-info/LICENSE sha256=GJMBhFl4pk_M2xENSV-tSSR5mGpH3oFx49ntHhqdp-I 1071
LRphase-1.1.2.dist-info/METADATA sha256=fQxFgA5rxJs6MZnp0KI9R2We03NC94CGSs2EJajayg4 7557
LRphase-1.1.2.dist-info/WHEEL sha256=OqRkF0eY5GHssMorFjlbTIq072vpHpF60fIQA6lS9xA 92
LRphase-1.1.2.dist-info/entry_points.txt sha256=DsMkx_0ck3mzDl4yosUOdy9SG5quzmjsjF0SWrd5-XU 46
LRphase-1.1.2.dist-info/top_level.txt sha256=TtFq0B9-uNPoC4067K2Phfv3ttJoUvpF-Ns0rZ3G3fE 117
LRphase-1.1.2.dist-info/RECORD — —

top_level.txt

HeterozygousSites
InputData
LRphase
PhasableSample
PhaseSet
PhasedRead
SimulatePhasedData
__init__
__main__
cli
urls

entry_points.txt

[console_scripts]
LRphase = LRphase.cli:main