mappgene
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1.4.0 | mappgene-1.4.0-py3-none-any.whl |
Wheel Details
Project: | mappgene |
Version: | 1.4.0 |
Filename: | mappgene-1.4.0-py3-none-any.whl |
Download: | [link] |
Size: | 3283019 |
MD5: | 29a75e6a92b4d6e6c51c4586d937f69a |
SHA256: | a20b218a3e7ebc5a26c261754a392bf30d030a2419e412c06614c1c2d0eedc0d |
Uploaded: | 2023-10-24 21:39:24 +0000 |
dist-info
METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt
METADATA
WHEEL
Wheel-Version: | 1.0 |
Generator: | bdist_wheel (0.41.2) |
Root-Is-Purelib: | true |
Tag: | py3-none-any |
RECORD
Path | Digest | Size |
---|---|---|
mappgene/__init__.py | sha256=8VCPnvSqyIVTVGMKupuTfZbTFsbulSXcNEN21bkPfRI | 19 |
mappgene/cli.py | sha256=Pje-Om9Ac9JePx9JnsUM7-Ffajrgt5QjZUEeQqb9dHg | 8644 |
mappgene/data/container/build.sh | sha256=u2n1spdZB-Zj-CUvysWz8iBaY2VHqhT1di6zi2RHesQ | 85 |
mappgene/data/container/recipe.def | sha256=Ff7RI4uFC_YLw3UlvMScxJIYo9wnSQw3JDN8LKCVag0 | 3534 |
mappgene/data/example_inputs/example_MN908947_3_1_R1.fastq.gz | sha256=kyXVs-4FsGrs-uEjif2qtklfMXJZ9-ROw9GU589VtPg | 1399569 |
mappgene/data/example_inputs/example_MN908947_3_1_R2.fastq.gz | sha256=KyDWJ0Q1PSygvfDkhC7ymrkzgmemTXLYZhShr0uzvGw | 1657077 |
mappgene/data/extra_files/ivar/GCF_009858895.2_ASM985889v3_genomic.gff | sha256=pGtc_dLpZ8qBrD1SVfA6R3dbLPijr84mjdsGNXKDNM8 | 5936 |
mappgene/data/extra_files/ivar/KJ776791.2.gff3 | sha256=8q2qwvCtKN4_Y-yhZDBXoAJf9DVMxg2nRAt8eGgM9yE | 788 |
mappgene/data/extra_files/ivar/KU501215.1.gff3 | sha256=RwRSf4x1U33N6sO6YCXn3EE5U9JDtLaZ-Ugf6Kj1dDY | 546 |
mappgene/data/extra_files/ivar/KU955593.1.gff3 | sha256=-hXbEvKqs0N0AtDPMfG1gjMwScuM1WMyCv2RZK0Fjmo | 658 |
mappgene/data/extra_files/ivar/KX087101.3.gff3 | sha256=RIdDxVc3tV2nEE1Aqg3l2__Pz_B7YUPo-hOjD_Yor6k | 3450 |
mappgene/data/extra_files/ivar/Primers for amplicon-based sequencing - ZIKV - Asia_America - 400bp.tsv | sha256=MWOrVMzzPPOglfEMlfas5qpbB71s9OOwPKCZiULJ9n4 | 3111 |
mappgene/data/extra_files/ivar/map_zibra_primers.sh | sha256=JSCcKUCWPG1JNJ-5ytTje5UiMv7wlBZYfjEQcdusuIQ | 1807 |
mappgene/data/extra_files/ivar/zibra.fa | sha256=tcuFA4HnWv2WsZGrLPbSFc2vwxv7O-CW6BUhcavSl5Q | 2720 |
mappgene/data/extra_files/ivar/primers_1200bp/nCoV-2019.bed | sha256=Uwly9gTFaYaBa69eZSeeCRX8jKsbzY0TNhL2rZYYUns | 3158 |
mappgene/data/extra_files/ivar/primers_1200bp/nCoV-2019.reference.fasta | sha256=sJpKPWgk3EqfOhfUgPMzX3PLFQeJf22tDehx6PANhjc | 30414 |
mappgene/data/extra_files/ivar/primers_1200bp/nCoV-2019.reference.fasta.fai | sha256=-_iS1Y4qBowdTUkAE605ClZT81CY4dG0t5ZpkFJGad0 | 26 |
mappgene/data/extra_files/ivar/primers_1200bp/nCoV-2019.scheme.bed | sha256=ZLQ94IUhMhrX0qQxSqRlZPLiKX0sNLvDVuhTokNaLHU | 3158 |
mappgene/data/extra_files/ivar/primers_1200bp/nCoV-2019.tsv | sha256=4aibj79GVDW1gT0CckU-IzoZqnx65bMWmqB7O-RZ6wc | 4132 |
mappgene/data/extra_files/ivar/primers_400bp/nCoV-2019.bed | sha256=Z9epVrl5icS3n9bclOnMZZDBk3rDktWsqvyuk_mnJJQ | 12019 |
mappgene/data/extra_files/ivar/primers_400bp/nCoV-2019.insert.bed | sha256=arRecdTxBkBE0moe13Bzhv7m27OE9RAPVYbDDjHMIMk | 2859 |
mappgene/data/extra_files/ivar/primers_400bp/nCoV-2019.primer.bed | sha256=bpjX1dHG7ayO8LrHDWmOCCiuQrr-jzvaCmJX0AzkFLU | 9839 |
mappgene/data/extra_files/ivar/primers_400bp/nCoV-2019.reference.fasta | sha256=sJpKPWgk3EqfOhfUgPMzX3PLFQeJf22tDehx6PANhjc | 30414 |
mappgene/data/extra_files/ivar/primers_400bp/nCoV-2019.scheme.bed | sha256=XrAa_duKJNTkXoWTRvNEVPNLkIpjqpf297EAqo5MUEE | 11801 |
mappgene/data/extra_files/ivar/primers_400bp/nCoV-2019.tsv | sha256=dLx6MW5ohL8h9i1NU-x5-dZWwOKtNB1pYvybmFPIrPA | 15550 |
mappgene/data/extra_files/ivar/primers_combo_3_4.1bp/MAPPGENE_README | sha256=9OTN4IsHIncbBIEKvstx_exZUJZkJnNTbkRJYj9O1Ac | 65 |
mappgene/data/extra_files/ivar/primers_combo_3_4.1bp/nCoV-2019.bed | sha256=81vy7V6_Hx3BJ5IgLlWmSYDa59bbTd2caJ009Fs3eyE | 27275 |
mappgene/data/extra_files/ivar/primers_combo_3_4.1bp/nCoV-2019.scheme.bed | sha256=98mAz1bFujwYrvPLLZBmr2X4T2Q0tGCgmWPL21OpRR0 | 21406 |
mappgene/data/extra_files/ivar/primers_combo_3_4.1bp/nCoV-2019.tsv | sha256=1YsmNxIZhqdPjoT29x38nApmpTKU_vc6P-711bu7bJs | 8202 |
mappgene/data/extra_files/ivar/primers_combo_3_4.1bp/rename_file_for_mappgene.sh | sha256=b1unsfIxJhnQ2yu3IaCRpX9Dezg2RXzmMAlBfbcUOYY | 457 |
mappgene/data/extra_files/ivar/primers_v4.1bp/MAPPGENE_README | sha256=9OTN4IsHIncbBIEKvstx_exZUJZkJnNTbkRJYj9O1Ac | 65 |
mappgene/data/extra_files/ivar/primers_v4.1bp/README | sha256=QTgMJpFq8sAfoB7iw7tv8S8Xfgl_3n-6jjfCMoEIA94 | 1084 |
mappgene/data/extra_files/ivar/primers_v4.1bp/SARS-CoV-2.insert.bed | sha256=GbfX2VlnXwZg4JUjPO1xMUdaL9ggM0e8twXqaph_SV8 | 4770 |
mappgene/data/extra_files/ivar/primers_v4.1bp/SARS-CoV-2.mask.fasta | sha256=XPexa3fccSIyiZGErRL6Znm5jdHDXWN1W-AK3jHNAeQ | 30343 |
mappgene/data/extra_files/ivar/primers_v4.1bp/SARS-CoV-2.primer.bed | sha256=mc_dDlp1eZcELjJveTiH1IhKbhZohw0GtM0KhWCq8hk | 15256 |
mappgene/data/extra_files/ivar/primers_v4.1bp/SARS-CoV-2.primer_pairs.tsv | sha256=yw2_9FmDLbhMmjl9BN2sGLZvyR_p1fCmLpHHrqrcZi8 | 3863 |
mappgene/data/extra_files/ivar/primers_v4.1bp/SARS-CoV-2.reference.fasta | sha256=sJpKPWgk3EqfOhfUgPMzX3PLFQeJf22tDehx6PANhjc | 30414 |
mappgene/data/extra_files/ivar/primers_v4.1bp/SARS-CoV-2.scheme.bed | sha256=VNVx8CN8hH3K8XLqSHaDZ8qWRxDhv4zGODK1DJMgt_A | 9605 |
mappgene/data/extra_files/ivar/primers_v4.1bp/nCoV-2019.bed | sha256=mc_dDlp1eZcELjJveTiH1IhKbhZohw0GtM0KhWCq8hk | 15256 |
mappgene/data/extra_files/ivar/primers_v4.1bp/nCoV-2019.scheme.bed | sha256=VNVx8CN8hH3K8XLqSHaDZ8qWRxDhv4zGODK1DJMgt_A | 9605 |
mappgene/data/extra_files/ivar/primers_v4.1bp/nCoV-2019.tsv | sha256=yw2_9FmDLbhMmjl9BN2sGLZvyR_p1fCmLpHHrqrcZi8 | 3863 |
mappgene/data/extra_files/ivar/primers_v4.1bp/rename_file_for_mappgene.sh | sha256=iQKvZmgSG3jwmfWKjyETQgEaPqAky8JSre48_Y46ppo | 150 |
mappgene/data/extra_files/ivar/primers_v4bp/MAPPGENE_README | sha256=9OTN4IsHIncbBIEKvstx_exZUJZkJnNTbkRJYj9O1Ac | 65 |
mappgene/data/extra_files/ivar/primers_v4bp/README | sha256=vgYT9X5iexG69CEn1kWW5ksORhmjNaxEoKWXpF1XG5w | 731 |
mappgene/data/extra_files/ivar/primers_v4bp/SARS-CoV-2.design.fasta | sha256=a8Z-mpSiy6aOABOiUztLJVgNinbSJsGJ6Zx2h8dpcMA | 243276 |
mappgene/data/extra_files/ivar/primers_v4bp/SARS-CoV-2.insert.bed | sha256=L0ChIF-lDOcqZayla3bkizvxaydEhsQn2-SHdCp4aHw | 4770 |
mappgene/data/extra_files/ivar/primers_v4bp/SARS-CoV-2.primer.bed | sha256=yaHnNpvb2r211Sp_UYpEOVtRgJOQNeVxWGoue_zJ68g | 14370 |
mappgene/data/extra_files/ivar/primers_v4bp/SARS-CoV-2.reference.fasta | sha256=sJpKPWgk3EqfOhfUgPMzX3PLFQeJf22tDehx6PANhjc | 30414 |
mappgene/data/extra_files/ivar/primers_v4bp/SARS-CoV-2.scheme.bed | sha256=C-JXSdXGFa2FUPXXSLOhOrOB2zC-cFEcbhtSbzG_oAo | 9045 |
mappgene/data/extra_files/ivar/primers_v4bp/nCoV-2019.bed | sha256=yaHnNpvb2r211Sp_UYpEOVtRgJOQNeVxWGoue_zJ68g | 14370 |
mappgene/data/extra_files/ivar/primers_v4bp/nCoV-2019.scheme.bed | sha256=C-JXSdXGFa2FUPXXSLOhOrOB2zC-cFEcbhtSbzG_oAo | 9045 |
mappgene/data/extra_files/ivar/primers_v4bp/nCoV-2019.tsv | sha256=8_U7euwj0zBgm2K9Q6oohWSNg4nNSrdoRbQozFgl80Y | 4041 |
mappgene/data/extra_files/ivar/primers_v4bp/rename_file_for_mappgene.sh | sha256=EQig_T89Ny8UXDoTor563qjOL_Q50Stx8vhjYkCddy4 | 312 |
mappgene/data/extra_files/ivar/primers_zibra_KJ776791.2bp/blast.tsv | sha256=p42a-kiyinZt0EO3Mlgprq5FPGJFjiXrpigBVdAl68s | 6316 |
mappgene/data/extra_files/ivar/primers_zibra_KJ776791.2bp/pairinfo.tsv | sha256=2K41T6ssFh3WurDJ7C2zdyCznw3GcAp9UxjnZNuwRjM | 1038 |
mappgene/data/extra_files/ivar/primers_zibra_KJ776791.2bp/primers.bed | sha256=bkuTyTE9zI-L9tq44he7yAA1PXiMHMKbQiUlp3QIjs4 | 4324 |
mappgene/data/extra_files/ivar/primers_zibra_KU501215.1bp/blast.tsv | sha256=pLxgxjc7WO6U7On5fu47-E_UKyzx42ww5cIK7jgRJjo | 6311 |
mappgene/data/extra_files/ivar/primers_zibra_KU501215.1bp/pairinfo.tsv | sha256=2K41T6ssFh3WurDJ7C2zdyCznw3GcAp9UxjnZNuwRjM | 1038 |
mappgene/data/extra_files/ivar/primers_zibra_KU501215.1bp/primers.bed | sha256=oNXQ_7UQWIm2sw6GhLSRGVmAUhmGugaTo53fKeVUsgk | 4319 |
mappgene/data/extra_files/ivar/primers_zibra_KU955593.1bp/blast.tsv | sha256=7aNeYpXRMkQTVp7XKa-2L7HNvfNMZNzxg8iHfotmdJk | 6285 |
mappgene/data/extra_files/ivar/primers_zibra_KU955593.1bp/pairinfo.tsv | sha256=2K41T6ssFh3WurDJ7C2zdyCznw3GcAp9UxjnZNuwRjM | 1038 |
mappgene/data/extra_files/ivar/primers_zibra_KU955593.1bp/primers.bed | sha256=5KRXijmA94WgsIbtkXLuq-X-2-7fravetyGi1pRs0J4 | 4313 |
mappgene/data/extra_files/ivar/primers_zibra_KX087101.3bp/blast.tsv | sha256=KpPuAGuQT9OpbS0s9X1-yOOFLll8hf6xwosmb4ZzaFM | 6310 |
mappgene/data/extra_files/ivar/primers_zibra_KX087101.3bp/pairinfo.tsv | sha256=2K41T6ssFh3WurDJ7C2zdyCznw3GcAp9UxjnZNuwRjM | 1038 |
mappgene/data/extra_files/ivar/primers_zibra_KX087101.3bp/primers.bed | sha256=j3v2N54YnDjg8laVrNz03Flfx4p-kcF6xYODjlwsevg | 4318 |
mappgene/data/extra_files/ivar/references/KJ776791.2.fasta | sha256=6vBKQfT7bJP9bf6RVdd37ffaltrV77Pabelx_JFN8oI | 11020 |
mappgene/data/extra_files/ivar/references/KU501215.1.fasta | sha256=XSK7TBPxgpnuONsNw99vJ7yRjC65hFn95x1OVydio_0 | 10887 |
mappgene/data/extra_files/ivar/references/KU955593.1.fasta | sha256=a_Y2bmrtVd9N9zOcv4jz69pKm-iq2Y49drOal1wofyM | 11055 |
mappgene/data/extra_files/ivar/references/KX087101.3.fasta | sha256=zkBYLmQHgIWpBA0CejO59zfbaCS-NitmnLXdHHTLt1g | 11015 |
mappgene/data/extra_files/ivar/references/NC_045512.2.fasta | sha256=GM7bCKZt-WMnOpVFSKvGRxVJiHr6TDfAOgT8MDSj5BI | 30427 |
mappgene/data/extra_files/ivar/references/PS_1200bp.fasta | sha256=gJgxzq3xoTfXqYis_oJFQgg0mr5qZZXlGnquOhrzQII | 2717 |
mappgene/subscripts/__init__.py | sha256=vfSxgSRJonIN4vgdKwapvUGYtznayPuUju6M2JeKErY | 44 |
mappgene/subscripts/ivar.py | sha256=v5XcU-Ed3OOGuZ5hOw_qPaWmeNZRv_I7CMPAPDjizFY | 9498 |
mappgene/subscripts/utilities.py | sha256=CCLhkvwLs1LtL5y-EY-PEq8S7Yi6__2hV9YSmsMTtLU | 12302 |
tests/__init__.py | sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU | 0 |
tests/ivar.py | sha256=dsoVi7k3OEWfiKsZBshgKpYsSBCMwwSiVAnYI44DHJc | 73 |
mappgene-1.4.0.dist-info/LICENSE | sha256=_hTk0bM_ZHRx7UPDM7vm05od2evjcRqXTdXpGwcmw9c | 1542 |
mappgene-1.4.0.dist-info/METADATA | sha256=gXRP5QW2g1K6PP3hXPEN9dHNBqYrHYPTIu-ZAltPVVA | 10817 |
mappgene-1.4.0.dist-info/NOTICE | sha256=ObkZsj34b5BC9vvTy3OZ1z9mSvPCj0TQNmFRUkcqK60 | 1168 |
mappgene-1.4.0.dist-info/WHEEL | sha256=yQN5g4mg4AybRjkgi-9yy4iQEFibGQmlz78Pik5Or-A | 92 |
mappgene-1.4.0.dist-info/entry_points.txt | sha256=k8fS72eea6HRtkCc7CuFU6pTyljtVDRp_kmS8HSmWb8 | 47 |
mappgene-1.4.0.dist-info/top_level.txt | sha256=zRFOypsHxUxip9j3GXFf_oHVVuxscXITWrSpYfxAirE | 15 |
mappgene-1.4.0.dist-info/RECORD | — | — |
top_level.txt
mappgene
tests
entry_points.txt
mappgene = mappgene.cli:main