MetaPhlAn

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4.1.0 MetaPhlAn-4.1.0-py3-none-any.whl

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Project: MetaPhlAn
Version: 4.1.0
Filename: MetaPhlAn-4.1.0-py3-none-any.whl
Download: [link]
Size: 4607895
MD5: 2ceba1e4f09a34d8c0f7525878334b08
SHA256: a85835f18ed7105f809ee8208128f51ed10a18b04d11e4d88b23731827c63cd7
Uploaded: 2024-02-21 07:58:00 +0000

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METADATA

Metadata-Version: 2.1
Name: MetaPhlAn
Version: 4.1.0
Summary: MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Author: Aitor Blanco-Miguez
Author-Email: aitor.blancomiguez[at]unitn.it
Home-Page: http://github.com/biobakery/MetaPhlAn/
License: LICENSE.txt
Requires-Dist: numpy
Requires-Dist: h5py
Requires-Dist: biom-format
Requires-Dist: biopython
Requires-Dist: pandas
Requires-Dist: scipy
Requires-Dist: hclust2
Requires-Dist: requests
Requires-Dist: dendropy
Requires-Dist: pysam
Requires-Dist: phylophlan
Description-Content-Type: text/markdown
[Description omitted; length: 3907 characters]

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metaphlan

entry_points.txt

add_metadata_tree.py = metaphlan.utils.add_metadata_tree:main
create_toy_database.py = metaphlan.utils.create_toy_database:main
extract_markers.py = metaphlan.utils.extract_markers:main
merge_metaphlan_tables.py = metaphlan.utils.merge_metaphlan_tables:main
merge_vsc_tables.py = metaphlan.utils.merge_vsc_tables:main
metaphlan = metaphlan.metaphlan:main
metaphlan2krona.py = metaphlan.utils.metaphlan2krona:main
plot_tree_graphlan.py = metaphlan.utils.plot_tree_graphlan:main
read_fastx.py = metaphlan.utils.read_fastx:main
run_treeshrink.py = metaphlan.utils.treeshrink.run_treeshrink:main
sample2markers.py = metaphlan.utils.sample2markers:main
sgb_to_gtdb_profile.py = metaphlan.utils.sgb_to_gtdb_profile:main
strain_transmission.py = metaphlan.utils.strain_transmission:main
strainphlan = metaphlan.strainphlan:main
treeshrink.py = metaphlan.utils.treeshrink.treeshrink:main