Path |
Digest |
Size |
moPepGen/SeqFeature.py |
sha256=YECJVC9WweOxYXyJ5dq4_kiU8hE_fPd6NQUBFaGP030
|
9075 |
moPepGen/__init__.py |
sha256=deJJL79vanwP30nM1cYLcCOT6ZzhMBt7-3FFyPHdCVg
|
3219 |
moPepGen/constant.py |
sha256=IqbuRfna6xf2RYaEsA4YhhuiQUSxigK5XR0xwSkqUtY
|
1678 |
moPepGen/err.py |
sha256=jlxL_mb3fnilU0EuoyXSkfvt55H0tAgBZmnLkrGicis
|
5018 |
moPepGen/fake.py |
sha256=b765zSRHk921W1aFPNgCLdp3SDW-TmmE3OeyO_-_IEI
|
35730 |
moPepGen/index.py |
sha256=43ICOHQ-CwY-swSvOm2EDtfuAvAP-5c7IOCAATv8M8c
|
9255 |
moPepGen/params.py |
sha256=_3objikNG5UIKfIWzSed4Jowp3JT6KA8i6wuyOSW_JM
|
3808 |
moPepGen/version.py |
sha256=p6DlpBvTycR-suH4sp_aoBPAWp5NVdWbaevqTgwlNMY
|
1873 |
moPepGen/aa/AminoAcidSeqDict.py |
sha256=mjBPvF2s1o94ae_suAlWQ6tXE2SBOt41C-NXuIOcXGk
|
5259 |
moPepGen/aa/AminoAcidSeqRecord.py |
sha256=YKDmUbOJ6Sm_LL7WqMZcrIQH91qEMbUyzCIrVGsiXX0
|
20340 |
moPepGen/aa/PeptidePoolSplitter.py |
sha256=kqsv4BccxHk9yM0plTNrzja-RN71Y_R0pJj_ijSsDq4
|
7796 |
moPepGen/aa/PeptidePoolSummarizer.py |
sha256=tIWFMP4OL9HGr9Qp1bBi0fBRIn16H_h4Is9xE_a7SCc
|
14393 |
moPepGen/aa/VariantPeptideIdentifier.py |
sha256=AdOmAruXhDi_3hl188qCa_Q0RdAdwyMrJ3nLV0siL-Y
|
12637 |
moPepGen/aa/VariantPeptideLabel.py |
sha256=E1LRdfzaJhU5S9mousyRDPuSnrj_rkL6TlxYlp8aGTs
|
13798 |
moPepGen/aa/VariantPeptidePool.py |
sha256=HLv7IuB44Askxc5WA_C5wiGNDRXGd_gs1LoMVgJmX7Q
|
6325 |
moPepGen/aa/__init__.py |
sha256=kefOtLQGGhUnqklE7xTN01I6bNil3tqreI0NMZk7PEY
|
467 |
moPepGen/aa/expasy_rules.py |
sha256=gHCy3aF0Zl40NjVoMAUe5qW1VUqlhy9gtQn0VsKX0Gc
|
4267 |
moPepGen/circ/CircRNA.py |
sha256=aWgl4QXmdafkuVnxKghlTHbzvs_1bPvoDYmmcF-84m4
|
3107 |
moPepGen/circ/__init__.py |
sha256=IDAmKN7d0RRdvX5kDzMGnKzCNkSU7j8RiZAOxHsNHMg
|
78 |
moPepGen/circ/io.py |
sha256=uIi0MZW6GKHTfuvraHnRGgql06ntOjflKkDV5td5D98
|
2196 |
moPepGen/cli/__init__.py |
sha256=KUZctaoWH6rubyD9kXE2jb81GV-Gny2XMccbYTZnfOY
|
1420 |
moPepGen/cli/__main__.py |
sha256=_ipV4cVzM8HJo-23mj9Zo4dr9gHXCkcpoOAuSHdw2E4
|
3712 |
moPepGen/cli/call_alt_translation.py |
sha256=rDE5ZR6mdMLlijmZL4yrPIJIN__HRGTOaZHIBwyHDhs
|
5354 |
moPepGen/cli/call_novel_orf.py |
sha256=oPJ8i3ZduWgGPks2N8phUTKLmC8DNXnf5guy0-dxPJg
|
9302 |
moPepGen/cli/call_variant_peptide.py |
sha256=wFiCbfbERGOvo3i63N79fvp91su_JWhNMmOZJIj22S8
|
33522 |
moPepGen/cli/common.py |
sha256=7OuiM9UYSa2CDgFVA908H1xCYZkNxCa4G8w7Ot-MUEE
|
13965 |
moPepGen/cli/decoy_fasta.py |
sha256=ms9Fw_zhDVN3elu1nn5ZRf8iJgFPIRyBwchC1lg3UeU
|
11881 |
moPepGen/cli/encode_fasta.py |
sha256=fP2SpXJbmTrl74AZ5ilgnHscJXPug1McLFC3lsYtCqE
|
4436 |
moPepGen/cli/filter_fasta.py |
sha256=pn6bWWLlkazb3vN_DmiortLiUFiQa4YEllVij5vSTaI
|
7493 |
moPepGen/cli/generate_index.py |
sha256=KXRI6yVLIhSRClI7dCYXrbJhDMKYrdf7FNKFu9mE7dM
|
4485 |
moPepGen/cli/index_gvf.py |
sha256=nMu2xUMZUCracs-9pRu4sBpWUCe25qH-6KHuh6f5g-E
|
2072 |
moPepGen/cli/merge_fasta.py |
sha256=nPVScqRaPG7EePeUGzYzAJOP_legZlXHy4HRmiCuc10
|
2560 |
moPepGen/cli/parse_arriba.py |
sha256=Cd9gYCUvHPhhH1PrqXPCJqhBZLhiK2uLFBezLWRb_BY
|
3698 |
moPepGen/cli/parse_circexplorer.py |
sha256=ULtZfaCT4q2L2yZ2pKSYiizvZ0IUvb8pVhgdiPvX_nQ
|
5232 |
moPepGen/cli/parse_fusion_catcher.py |
sha256=bAFVCKUDAg63yklKDjESAenyqgdLjuXZ51ePOtcgqPc
|
3252 |
moPepGen/cli/parse_reditools.py |
sha256=BEb4GGz6t6pwvkLWh2rORrMa5OMd_9jE1QM5uKuaZlI
|
4663 |
moPepGen/cli/parse_rmats.py |
sha256=wRfGv1zcqiAqAPjO553srwEwpo7Oie48HYE1hmhSPLU
|
6071 |
moPepGen/cli/parse_star_fusion.py |
sha256=i5LCOhT4DOKhz3KbiWFSCw2zRG1csaRXVO053pwT3j0
|
2950 |
moPepGen/cli/parse_vep.py |
sha256=z3z-wIu5RPoy44d6pYsWjsapPtGaob5B3qYBNxLj23Q
|
3982 |
moPepGen/cli/split_fasta.py |
sha256=uvKcx-FA9dcvl5Uq1mZjRPSXO1z1u8LmDtV-0TB1IJY
|
7102 |
moPepGen/cli/summarize_fasta.py |
sha256=3PvrhHvslTr8dDKAJqWHrRlzZYMifVMCuUfiQQ4octA
|
8459 |
moPepGen/cli/update_index.py |
sha256=aTmjyeW5pMCBASUeYr98EOmyzkM0r8atNprIdN24l_4
|
3114 |
moPepGen/data/gencode_hs_exclusion_list.txt |
sha256=Smf1UojZ4z0dVUy9XdeNlYwG3LvaA5XEaD3vhTGHTCE
|
259 |
moPepGen/dna/DNASeqDict.py |
sha256=dime6GLJD2Hg07hFUjHJsfz7wRjWeHlom68g34cTd5A
|
1540 |
moPepGen/dna/DNASeqRecord.py |
sha256=hrkgeqHIBTWnVX2ujhd8Chleyy4zZ6GZGVJuvJRcPLA
|
16648 |
moPepGen/dna/__init__.py |
sha256=YHiM-tY5ft5SM1I6bH49K1QSake4xSyU0YuExkt4VJI
|
150 |
moPepGen/gtf/GTFPointer.py |
sha256=opWu9-Q0QrP1iE-7UbOFCocY8ltn3hMamrHpCMSbnAA
|
9727 |
moPepGen/gtf/GTFRecord.py |
sha256=ARBuU1KOI_hz9MmEf26bdaV7781X0tBBsOKyYUO0Zi0
|
2818 |
moPepGen/gtf/GTFSeqFeature.py |
sha256=8A-iwBNzjvFupziRJAsPhQpxCCjfrtSxoUsVQkUVy44
|
3443 |
moPepGen/gtf/GTFSourceInferrer.py |
sha256=693XYp5O0I_gERq91XrLKcrtY6HxCyhL1moyNwW0O9s
|
971 |
moPepGen/gtf/GeneAnnotationModel.py |
sha256=4h0QtubdzoC_Dtoksghbt_Wsk7cTC7dQxWZ8qYG0Z4s
|
1919 |
moPepGen/gtf/GenomicAnnotation.py |
sha256=7NM7qvnUnUM4lrUlUgrj7E1dTHkZ8iwHYItcP6RoKSU
|
20945 |
moPepGen/gtf/GenomicAnnotationOnDisk.py |
sha256=Gx-3sODzsCm65_82CJ2defHXw4pcIynLx-ZSSeg3IyI
|
4782 |
moPepGen/gtf/GtfIO.py |
sha256=3cfqfbySfCExzq6IMZS2bgn7RxSE3IHopzsreSKJNVg
|
3980 |
moPepGen/gtf/TranscriptAnnotationModel.py |
sha256=jHRZcyj8CkYxNW1JdEOneHF2qryyQqGOuia-Y3Zk_vA
|
17134 |
moPepGen/gtf/__init__.py |
sha256=x_wIZ40ivMVJ0D16z5fcATItABDa2zWAsSZ_VqZ8FrU
|
303 |
moPepGen/parser/ArribaParser.py |
sha256=zCUJTC9kvdkAygrSMC-ao_ikPBHZViWacYkxQshh9_A
|
10604 |
moPepGen/parser/CIRCexplorerParser.py |
sha256=TH03J5sb-8OgyBTYZxeiSZwpZrzwGhdA2PTgIuOh9pc
|
6461 |
moPepGen/parser/FusionCatcherParser.py |
sha256=_CucZV02qu3B6ATYMH44Xb_8PYkuR31pyAmEitiZLEw
|
9417 |
moPepGen/parser/REDItoolsParser.py |
sha256=HCWAGNGX_E-wfcuJOWG5ym40x4x7OUoqzgdcK6V6a5A
|
7067 |
moPepGen/parser/STARFusionParser.py |
sha256=0Lq3RzOCJlGJd-WdLPeQEzqafpS1gbTKxFgtMgDAtVc
|
7365 |
moPepGen/parser/VEPParser.py |
sha256=14aDuceAgPzFL-cZZQ9LjUAsq3B6e01PU-E6BxzLvRo
|
8879 |
moPepGen/parser/__init__.py |
sha256=9veP1fbLr--UKwzxUni4dDXW8FW4ceyPYcDq4crunLM
|
272 |
moPepGen/parser/RMATSParser/A3SSRecord.py |
sha256=21LTcYRM9J0iHATeSALsW2VPp8LHnnIQWdOZEf3NVNc
|
6444 |
moPepGen/parser/RMATSParser/A5SSRecord.py |
sha256=9HPskfXX3YBeD8DaKF6_Gthtc8mNywIBVyFlun0Cbqo
|
6443 |
moPepGen/parser/RMATSParser/MXERecord.py |
sha256=EduyCK1QH5JDYo9Raiashwjsd2SCyAjfJwWAH865cck
|
5927 |
moPepGen/parser/RMATSParser/RIRecord.py |
sha256=zjmp3APr8_bJG3nD1dUzmeb00zXcgiVJHkX-XpIK4h0
|
6143 |
moPepGen/parser/RMATSParser/RMATSRecord.py |
sha256=qCYujnUwOk2xsyy7Wet5w6uULxuTFDtCwwhJKYC6hBk
|
563 |
moPepGen/parser/RMATSParser/SERecord.py |
sha256=iqa3oWVKk-xIA_CPsI5EhfajjnkCbhcs6Dik5NFHYaw
|
5807 |
moPepGen/parser/RMATSParser/__init__.py |
sha256=LmCm5mS8-eRmgYG1JrT04gXWNJmnC8uskRVHW6V4cZ0
|
882 |
moPepGen/seqvar/GVFIndex.py |
sha256=KvduiJeMPYhP04dy13aY736x5VKFRjLBRwru4eUgabU
|
2947 |
moPepGen/seqvar/GVFMetadata.py |
sha256=qmw6B_AANBEenzcNBkgtnhcC6HFcdGRIDKX9-xpfA0g
|
6430 |
moPepGen/seqvar/GVFMetadataInfo.py |
sha256=W76zncwTQqQpTTXbe26SzArtyNwMMrm3hSpS5-O1BnU
|
3077 |
moPepGen/seqvar/SplicingJunction.py |
sha256=P5EQMW60Mz5qWBagdXUQRaoNRMu-z2rhLCPURUsppt0
|
22437 |
moPepGen/seqvar/VariantRecord.py |
sha256=xPWiRnJm6ay90FLPUvR7RxwnEBSB-Z9tunQSSJ58iS8
|
25737 |
moPepGen/seqvar/VariantRecordPool.py |
sha256=ev1049JACGdTc8haoHLWGEIC85g5EHyAmCf-rvHgNj4
|
9004 |
moPepGen/seqvar/VariantRecordPoolOnDisk.py |
sha256=oQlIypPyha3F8j6G597w6zhDGLyWIZtfBmpcfbpljj8
|
12369 |
moPepGen/seqvar/VariantRecordWithCoordinate.py |
sha256=TQeRaOrM9gVen-JAJmLp9opyve3_Rq4qQpXhlw_g0kY
|
3818 |
moPepGen/seqvar/__init__.py |
sha256=Cnw5jrxKMyi2jtJ9VrXHpYTFn4kbDZet6x8GSjRfEIQ
|
721 |
moPepGen/seqvar/io.py |
sha256=NJrqjzE49yyRrtUNkPn9JQvrloEkoNO5YoujQeNPRpE
|
4296 |
moPepGen/svgraph/PVGNode.py |
sha256=JXFARjcV_ZeNSYmarg7SojlXvYyjY5fSdLfoCfSLfOA
|
49558 |
moPepGen/svgraph/PVGNodeCollapser.py |
sha256=vslj0JYbXY9XoDR3XvGzuPBYWtJMw_4Tb390JsDDvbQ
|
10961 |
moPepGen/svgraph/PVGOrf.py |
sha256=vf0ik0j5adP7cmzf6bL_mSgp5ijZmjAh9Uj6xl9Jx28
|
9760 |
moPepGen/svgraph/PeptideVariantGraph.py |
sha256=2kqt5PC9C11ZqBwvcCSDyl3XK5RjSJ2Tp4jJ_IFdPxM
|
63207 |
moPepGen/svgraph/SubgraphTree.py |
sha256=tNZBsT_VR1M0idQ7yg5Y8TvgZTJTpjysq0Bdp8Wo2MQ
|
3289 |
moPepGen/svgraph/TVGCursor.py |
sha256=oY_SHo0nxV5rjroMVqO9nPFSJjEMKH01TB1zItMe7ZE
|
448 |
moPepGen/svgraph/TVGEdge.py |
sha256=bPOF5_6C3pwBgkxWS2d-fRVdkRAA9M1QmHnRvlAWvTo
|
1110 |
moPepGen/svgraph/TVGNode.py |
sha256=qn_VhTPvEI2elw8fnkh6X1Ss9IyNASeadTsiJCQ2kbY
|
35241 |
moPepGen/svgraph/TVGNodeCollapser.py |
sha256=oRL5ne9noz5ZZ3IsIfgHJfHpoWCkx0ZVJVp8IhZIZgc
|
3694 |
moPepGen/svgraph/ThreeFrameCVG.py |
sha256=1Ikgd4H9V2js-52NFsvF2DcPJpR_MR4mOLfN-NbziiY
|
8636 |
moPepGen/svgraph/ThreeFrameTVG.py |
sha256=hMgfMN6PR0Jf5nwMPHsAoA2coIMl7LqIEWlnL1aWSFg
|
85064 |
moPepGen/svgraph/VariantCombinations.py |
sha256=dOaLW3Z0IfFwdGpu7gyE5FuhoIqJrcOvzS2cucubC7E
|
2099 |
moPepGen/svgraph/VariantPeptideDict.py |
sha256=H_vbypE0_mtoHZWjsrzvPNBxyiUse8s93QEXJ3mXz_4
|
37766 |
moPepGen/svgraph/VariantPeptideTable.py |
sha256=CccAWdGvIToGwjUcCDnHcJS3I-xK1JeX0SR01Y4qM4M
|
6184 |
moPepGen/svgraph/__init__.py |
sha256=a9Id4IMj9v0EDX1tsJlv4aUEKtAcUWPuNdGwpFVkx-s
|
481 |
moPepGen/util/ResourcesMonitor.py |
sha256=LVA6vBXJSRIf6OqYgeElX45otKIWC-fCuzKaJaGKFtI
|
2325 |
moPepGen/util/__init__.py |
sha256=FAhj4I5ejpzHk3o2Ehutyl9mnfwCw3rvhSSRFsf_ews
|
413 |
moPepGen/util/__main__.py |
sha256=4uAinIN3uFiVjO6AvGUHfsPvkoaJMwUS7gR6cMXUpBw
|
1201 |
moPepGen/util/add_fuzz_test_log.py |
sha256=Cg5tOXlXAEuZpX2_kebQhaknw-0fHjc3pG0GuYlbdxE
|
6996 |
moPepGen/util/brute_force.py |
sha256=r7xKONSAcS_LBDEXSq6A8uOJlPR9s10wZbLeWUKJbVE
|
57504 |
moPepGen/util/brute_force_novel_orf.py |
sha256=mmGeE1Kx1361XntQrdgN7A0PfILmmlhuO-ObNUSdu64
|
3298 |
moPepGen/util/common.py |
sha256=prpdNu69sdnVFo0y8tWFvlL_0M1KbeAGLdjrpm0wSV4
|
710 |
moPepGen/util/downsample_reference.py |
sha256=78ix6mj6aL3cQ0nqzZVdi-ZvnFMcBz0B6suWQle0nwA
|
13829 |
moPepGen/util/extract_gvf.py |
sha256=dey86Q6jdEDPnyLE8gliLTBycVTKIddi3d_pktIz3Zk
|
3001 |
moPepGen/util/fuzz_test.py |
sha256=H2RpIsD-30GnBRA-vcqL4bIsWh5LIz_wi4LcPbxrw5I
|
32497 |
moPepGen/util/validate_novel_orf_calling.py |
sha256=ZYHgaBv6XDnthy7HW7OBWIlqp1F3S0dA8mqgVxkPWsA
|
10591 |
moPepGen/util/validate_variant_calling.py |
sha256=6JAYewMwGHahXfD-3ArbZOmzVvVOEpypgYy4KWy6Vso
|
7593 |
mopepgen-1.4.0.dist-info/LICENSE.txt |
sha256=gXf5dRMhNSbfLPYYTY_5hsZ1r7UU1OaKQEAQUhuIBkM
|
18092 |
mopepgen-1.4.0.dist-info/METADATA |
sha256=asqvcZzDGVvipsELXRTqr1InMwikU6gF54d6v23Dr8A
|
2580 |
mopepgen-1.4.0.dist-info/WHEEL |
sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ
|
92 |
mopepgen-1.4.0.dist-info/entry_points.txt |
sha256=YM5iDVHVMvWw5bXzBAlgU0H21cGmwpwZx0y9yliUOYs
|
100 |
mopepgen-1.4.0.dist-info/top_level.txt |
sha256=w-WZt606wh54jUhu6UIrXgjCVoGwuUYBXpf7Kn8LKmE
|
9 |
mopepgen-1.4.0.dist-info/RECORD |
— |
— |