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omicidx

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1.11.3 omicidx-1.11.3-py3-none-any.whl

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Project: omicidx
Version: 1.11.3
Filename: omicidx-1.11.3-py3-none-any.whl
Download: [link]
Size: 42742
MD5: 529d5f37b67b3664ac1bd51c4777a187
SHA256: ab1edea87eb2c2e622647a21ab653ba58f5780fe76b0c1b428cc922f037c742b
Uploaded: 2024-04-12 13:17:52 +0000

dist-info

METADATA · WHEEL · RECORD · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: omicidx
Version: 1.11.3
Summary: The OmicIDX project collects, reprocesses, and then republishes metadata from multiple public genomics repositories. Included are the NCBI SRA, Biosample, and GEO databases. Publication is via the cloud data warehouse platform Bigquery, a set of performant search and retrieval APIs, and a set of json-format files for easy incorporation into other projects.
Author: Sean Davis
Author-Email: seandavi[at]gmail.com
Home-Page: https://github.com/omicidx/omicidx-parsers
Project-Url: Repository, https://github.com/omicidx/omicidx-parsers
License: MIT
Keywords: genomics,bioinformatics,open data,API
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Requires-Python: >=3.8
Requires-Dist: Click
Requires-Dist: aiohttp (<4.0.0,>=3.6.2)
Requires-Dist: biopython (<2.0,>=1.81)
Requires-Dist: databases (<0.8.0,>=0.7.0)
Requires-Dist: gcsfs (<2024.0.0,>=2023.12.2.post1)
Requires-Dist: httpx
Requires-Dist: orjson (<4.0.0,>=3.9.2)
Requires-Dist: pendulum
Requires-Dist: pronto (<3.0.0,>=2.5.4)
Requires-Dist: pydantic (<3,>=2)
Requires-Dist: pytest (<8.0.0,>=7.4.0)
Requires-Dist: requests (<3.0,>=2.22)
Requires-Dist: tenacity (<9.0.0,>=8.0.1)
Requires-Dist: trio (<0.23.0,>=0.22.0)
Requires-Dist: universal-pathlib
Description-Content-Type: text/markdown
[No description]

WHEEL

Wheel-Version: 1.0
Generator: poetry-core 1.5.2
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

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omicidx-1.11.3.dist-info/RECORD — —

entry_points.txt

[console_scripts]
omicidx_tool = omicidx.scripts.geo:cli