Path |
Digest |
Size |
omicverse/.DS_Store |
sha256=TPLc3I1-ZgQWu4B8jhg1rkTY4fBer3yBih2iHMTSdEo
|
14340 |
omicverse/__init__.py |
sha256=7V-WUBRfc_zuufmmiZy4O0MZu5ZlSuoA6e_gP8M2Jbw
|
857 |
omicverse/.ipynb_checkpoints/__init__-checkpoint.py |
sha256=1Hw3nJiF88KRq8837kdHnPTPohobf61JPgSbSN-ryrM
|
320 |
omicverse/CEFCON/.DS_Store |
sha256=BbgfECi2FLH4Oe90WLZlm_CQXpYyKVA5pDIv7CEEnOU
|
6148 |
omicverse/CEFCON/CEFCON.py |
sha256=zv7ej2xe36OV5NPYPZIMC2sPHdatuwBoULUfHNwKQMg
|
5763 |
omicverse/CEFCON/__init__.py |
sha256=WG0ejOkld18GHt50qghUU8EWW5gRBwUEx9ELJzKfMjc
|
578 |
omicverse/CEFCON/cefcon_result_object.py |
sha256=882kQAzakgT9HKfmp1tAxzZ7FAIqtq_CKF2NAaEgxB0
|
20088 |
omicverse/CEFCON/cell_lineage_GRN.py |
sha256=1m3GgwNSiALfZX5_X225Hgjxl5UH2bS9V_lTKZeQGNk
|
25206 |
omicverse/CEFCON/datasets.py |
sha256=tEaH_9StvaJDpUGLt4ebme9DXimT1RVFylT1SaJGyjk
|
12749 |
omicverse/CEFCON/driver_regulators.py |
sha256=hzli3S7_6TDrsZDDGagYZXuDf-918fkdklwU552FU-w
|
19274 |
omicverse/CEFCON/eval_utils.py |
sha256=SbGmzP5nIDyAIarz5DuUyNLGsVObS5HR5xwfLKFZ20E
|
10834 |
omicverse/CEFCON/utils.py |
sha256=7xt14aBwfWpCXL5J49SE-br7xw6_apytAlGhkZ8faeg
|
18943 |
omicverse/CEFCON/resources/__init__.py |
sha256=aUarWgSiViVLNV1wHEhaBmsIYaia7RCVRRiL7HFFvfU
|
1447 |
omicverse/CEFCON/resources/hs_hgnc_tfs_animaltfdb4.txt |
sha256=UcDFclMn875IwFISd5RRnYLlkSWtWgtf96DGUQwEJ2U
|
10200 |
omicverse/CEFCON/resources/hs_hgnc_tfs_lambert2018.txt |
sha256=Nztk09vAWKc4i3lbOWzSjd2_eUgK0csh7J-nqPyTwn0
|
10199 |
omicverse/CEFCON/resources/mm_mgi_tfs.txt |
sha256=aaXnDA_PFkQ-LG3HdzXFtRGJZPPKpuA-6tK26c_OGHA
|
10775 |
omicverse/CEFCON/resources/mm_mgi_tfs_animaltfdb4.txt |
sha256=9Xrt0DWUoQNjyFkbGLWTWsaumXNoGKxc-8-BWTwHkmY
|
10219 |
omicverse/SEACells/__init__.py |
sha256=At3qxBCbDpBaNw9n9FXWj9vsmeF6PTjt9qCcRvtujLE
|
43 |
omicverse/SEACells/accessibility.py |
sha256=c0JZJS48X1KR6DUHfyys7ciWf666qN8w_PvyNfS0sWA
|
4422 |
omicverse/SEACells/build_graph.py |
sha256=zA4RvknFf5vvNlX6Qxrut9997-ZXJeoEULvDHtx9Huk
|
6700 |
omicverse/SEACells/core.py |
sha256=Z49-FCmoL-O6dYXCTrUP8pIM1EQ5lnY8uw1doPaQyd8
|
8749 |
omicverse/SEACells/cpu.py |
sha256=CiaEmUFCfickjxvsLAXHdHF9O6M4sDk3FCJp7roALzc
|
28399 |
omicverse/SEACells/cpu_dense.py |
sha256=CM-ZS5vLQ3DmlrO3xa4saA_u5iZ8Jl2F8JemdfQnIwA
|
20804 |
omicverse/SEACells/domainadapt.py |
sha256=0lRbsdpXh3ZBsV8l9015ih9nVpuzbWT6JmNfxTkdNPg
|
4565 |
omicverse/SEACells/evaluate.py |
sha256=L-PCDk_n2IrFkGeRRYqVYY2aW70vEdZP_0z1hu_EPo0
|
5112 |
omicverse/SEACells/genescores.py |
sha256=4kVWpHu6qX5gQ1LD8fMaYqHPVC45lkXCmr3G5iDErGc
|
12141 |
omicverse/SEACells/gpu.py |
sha256=-3BCopKxHzBaGzj863tDCPMhPkV_iYAcnDadIuP09rs
|
28340 |
omicverse/SEACells/plot.py |
sha256=TnAfMYbShO-SCv3uzAxRStrURh4zJHrk7OTCpGhl83Y
|
5030 |
omicverse/SEACells/preprocess.py |
sha256=bSquJyiPok55Sv0KsyLEYIepsGDvxGY8i7HqHd26Nxw
|
302 |
omicverse/SEACells/tfactivity.py |
sha256=gyxjKGJulFOcVlrx-QSdAhMFi-qfYVbX2VRXe9umgQY
|
8601 |
omicverse/SEACells/utils.py |
sha256=nGUwmSV_ZgKl1e21uD5mUfhWtBXaw5woORWi7T65s-8
|
3220 |
omicverse/SEACells/version.py |
sha256=4OkE0ip9KkRuWv6X07e8bGGgCDuzdoHXDQwhFUaqWkg
|
119 |
omicverse/SEACells/Rscripts/chromVAR.R |
sha256=elKQf8QG0lVZi3nEQVjWkXUyCGiUxlVr3FWKAOX3kB0
|
1987 |
omicverse/SEACells/Rscripts/tanay.R |
sha256=jvb-PmDPo2OXfWJumDdD7PmKPTuovaimHorEX8ITH5U
|
87 |
omicverse/STAGATE_pyG/STAGATE.py |
sha256=IiTrI68wOxuOF1dA9i0dj97pkbm6MudNT4Bdrz9A-5I
|
1624 |
omicverse/STAGATE_pyG/Train_STAGATE.py |
sha256=mX_K6pfsaQ6An2UT1Izz74iSeEwVMFtOq3W9QAmV76U
|
3096 |
omicverse/STAGATE_pyG/__init__.py |
sha256=jxDqtiYeLk7KvaE_b8MXH0M8J2ANNtGZ2e1gsOxB7dQ
|
373 |
omicverse/STAGATE_pyG/gat_conv.py |
sha256=eephYcqfDRmE2_3HzyoiVnByiN5JxBa8QBC-GpcsrjI
|
9355 |
omicverse/STAGATE_pyG/utils.py |
sha256=pcjQvtyETZw90LZtL0ZnjTB5J5uap7XLeEcVQmtwHYE
|
9881 |
omicverse/STAligner/STALIGNER.py |
sha256=21QJWQsgwQf-B9PJ3SlnKXroV-lC1d3EpnvT1zJXuZI
|
1629 |
omicverse/STAligner/ST_utils.py |
sha256=Z2XRhZR-l84SQpBMdfsyFpnArzEpnmCw9kxtK7jQ3Sk
|
13944 |
omicverse/STAligner/gat_conv.py |
sha256=AQKeZvFYM7sGoXEIqi_bnX1CfdpYbg7lmwLdZh522dw
|
11855 |
omicverse/STAligner/mnn_utils.py |
sha256=f-mYTbOV1sXctGexEso8vdM0Ci4BjK_B4ItDxv_tPp8
|
4830 |
omicverse/STAligner/train_STAligner.py |
sha256=R4TgfMzFG41__u3OA2wnlxIa2bwqzHyokgD06TLCVQ0
|
16871 |
omicverse/bulk/.DS_Store |
sha256=2Q_FzNfcdlWXQR_dW8-_lTTcbC7yTZIa3imkAOs9cYU
|
6148 |
omicverse/bulk/_Deseq2.py |
sha256=XYs9vgt7xF1MUJMJiG1Wsk-jH3TBCunQgTKuxle56So
|
25320 |
omicverse/bulk/_Enrichment.py |
sha256=8pcQ6cw9soHGlD5I2Vx7x22EA5Fe2Z2h6UHeouB9fHI
|
21289 |
omicverse/bulk/_Gene_module.py |
sha256=ggph2YsThi0bcCFgTpr4r1_ECZmrihX9LwNWb_ftUZY
|
29240 |
omicverse/bulk/__init__.py |
sha256=Eg4KD_aepVBYdz-oBkVcQFb-N8vxQ157Z6YHE0FTgRI
|
629 |
omicverse/bulk/_chm13.py |
sha256=hlWEJRsQ5ALxyRRyRxZkMKSfhS3jtg2nBPQVhc1lE20
|
633338 |
omicverse/bulk/_combat.py |
sha256=6M_46DEQvuaiZXTH_xK00ry79qrUHhWU_PGzjehk5EI
|
502 |
omicverse/bulk/_df_apply.py |
sha256=cWlzMadVi1oOXG_SbSjoqFZ5vFgOVt3BeR5tPbJsYP0
|
1633 |
omicverse/bulk/_dynamicTree.py |
sha256=UDg2nhG6_y078KAuy-nGWmTWya6uVxnOkyUQlZiO5kc
|
42804 |
omicverse/bulk/_network.py |
sha256=kVuL7PyodaIdOJ1WxBWVYw2HwCNl-44ZdS8nVT1uAzE
|
6919 |
omicverse/bulk/_tcga.py |
sha256=MnGoDqW4ZHADMqVoOL-8fc5C9NIMUBSzGRR0Cg23P4o
|
12290 |
omicverse/bulk2single/__init__.py |
sha256=t7BinQDNNzNBH4VzCdDwfkHuI9wmoW9KGDD-7VTh4LQ
|
275 |
omicverse/bulk2single/_bulk2single.py |
sha256=c_4Z8REDTIJaw-NZfSzAU0dHixkHrxaz4hjb0Rybjek
|
17858 |
omicverse/bulk2single/_bulkdeconvolve.py |
sha256=U8rOIjNom2iRMhSIeXoK53t436QEmOq2izASczYY7sk
|
829 |
omicverse/bulk2single/_bulktrajblend.py |
sha256=8Uqnxc8x5KVKHvrR3ran7IdJSF_qJ_J7yyJUTJkDNvQ
|
15889 |
omicverse/bulk2single/_map_utils.py |
sha256=L-7rk-iB5sFplKgvjwdQWjWzRNu6aw_lak50kS69elE
|
29806 |
omicverse/bulk2single/_map_utils1.py |
sha256=iDA3g2-gCw8QyFDagPaAwhprx2KpKNj9bIN8wtlcXPU
|
24978 |
omicverse/bulk2single/_single2spatial.py |
sha256=EFZHi4NqvXg6nYzSrYly5eyBjjL1HzuRugkuGyTbe4Q
|
12746 |
omicverse/bulk2single/_utils.py |
sha256=jYlK8zSUGJRjO236abMMn-LbHk3k6zRWg0iV-MsqIeU
|
10462 |
omicverse/bulk2single/_vae.py |
sha256=BFd5WPTIAcXJwoFUJQBcVUcRoEFVJBOAzt8NEPXVo4g
|
8560 |
omicverse/cylib/README.rst |
sha256=gBL79vJTcBHYAbH0d22MwixhUbC8utIJzTiUMg7NESI
|
48 |
omicverse/cylib/__init__.py |
sha256=hTqIchGwUJIH-__yqgppSZ3HAeZ0Ie8wGluBts0z-5Q
|
25 |
omicverse/cylib/fast_utils.py |
sha256=s5k20LlXItCJ_aZxspH3d_SgRtcBe4gWyPQUciY_lnE
|
3338 |
omicverse/data_files/README.md |
sha256=8-OsQ068w7ll0M9e0FgFEqeW2x7F2o-gzPn32-wGtuM
|
1313 |
omicverse/data_files/apoptosis_human.gmt |
sha256=90luxJc81X4xbzMoGhQH3UOSdbs8CFRMR1G1BNxPPUk
|
613 |
omicverse/data_files/apoptosis_mouse.gmt |
sha256=b-1JE2crAobL4hal6O6SIXod5eItSt7EiU_zA_oKnhY
|
598 |
omicverse/data_files/c2.cp.v7.5.1.symbols.gmt |
sha256=0kzMPH7Lm13lSwrCmm23jQRlgS3Rd4w2-hnlPprUjz4
|
1277787 |
omicverse/data_files/cell_cycle_human.gmt |
sha256=F_31OOXNaRmF2vsRb10Epn0k8SZw4ZiE4X1obS_d1Ik
|
597 |
omicverse/data_files/cell_cycle_mouse.gmt |
sha256=okZKd79sl2CLeoyJ5mGAkoOlp3BuCUu5Hc3rbz6gBP0
|
597 |
omicverse/data_files/emt_human.gmt |
sha256=FwyWHkeHkJ_VIaNMncPKpqJAmYUk4H_dfzSFaNRYoLo
|
222 |
omicverse/data_files/gender_human.gmt |
sha256=ljTCJbpmylJ1NogwNAJi4Jqnh4LGeIW0iVhvA3zokHs
|
230 |
omicverse/data_files/gender_mouse.gmt |
sha256=csIUraNAXZpOh7HCaImXY2YO3qbSdNPuzn5YKh7Q10M
|
142 |
omicverse/data_files/h.all.v7.5.1.symbols.gmt |
sha256=3g_e44ryYRooSXP1Zd8amL-iOFrs17ou4_5RII51O0A
|
48244 |
omicverse/data_files/human_lung.gmt |
sha256=YII34BOS5fu_nuenuYDfJZTXKJIRJakRwj1itad2eOM
|
2725 |
omicverse/data_files/human_t_cell_markers.gmt |
sha256=Nx33pMcD-B8-uddEfMxsCVii9d9Gu5C0fz0FNr2dmlM
|
743 |
omicverse/data_files/mitochondrial_genes_human.gmt |
sha256=iktNyyhct4ygV8iJ0Y6Y0ELVuttl5JMPXm5LXciwPp0
|
929 |
omicverse/data_files/mitochondrial_genes_mouse.gmt |
sha256=jhx1dDDj-yizDppwTnOvv-DSImo4ExPqZa5hA-hBhMQ
|
930 |
omicverse/data_files/mouse_brain.gmt |
sha256=ieWfGlvz62IxhwCcVsy1t859T1o4UET_B6dQQAA01oE
|
706 |
omicverse/data_files/mouse_liver.gmt |
sha256=7Kgl8yfa0pLCE-6F1pM2aDQ19YZzDh-B6VK1_33tCp8
|
1931 |
omicverse/data_files/mouse_lung.gmt |
sha256=zTDr2tpnz4WumXvrColhyVypBiTF3pkUbThyF--pBsM
|
4068 |
omicverse/data_files/ribosomal_genes_human.gmt |
sha256=Zxz9hQN-wP2cRjNE_mz5OsGqGi9V8dva2dSrZa7OPIs
|
787 |
omicverse/data_files/ribosomal_genes_mouse.gmt |
sha256=P_7MZ55FErZhuUAp0KF_K3cpOo0Zq8AnxU0ZIC-d7gQ
|
801 |
omicverse/mofapy2/__init__.py |
sha256=qAv--6i3TaVNiQrRO74KS0IBCv5aP1hQcW06qvKGHEQ
|
55 |
omicverse/mofapy2/config.py |
sha256=79LaBKvCGHunIuDMk24mCuOq-X5QvNtVI_WU3YRY6jA
|
405 |
omicverse/mofapy2/version.py |
sha256=bSuLoXsCr0tyq73AR1msMfHVln1UlaeZ5tDociTj1ok
|
22 |
omicverse/mofapy2/build_model/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
omicverse/mofapy2/build_model/build_model.py |
sha256=OKg64y_VvloIyZ3qxhw7khyPqS76CnFRt4AUUNeO5y8
|
13189 |
omicverse/mofapy2/build_model/init_model.py |
sha256=YlbpNYc6IPVSf_RSbWvFtwBKarJYis9qaJOmiqs3Eio
|
28425 |
omicverse/mofapy2/build_model/save_model.py |
sha256=vg9QY6B3emAy4loIzje9ovPiwOttQYxP_2tGpIZdBD0
|
25076 |
omicverse/mofapy2/build_model/train_model.py |
sha256=xuGiBwTHzX2s9KAQDqoycezT6rXgfyoepLZ4wwy7FKU
|
637 |
omicverse/mofapy2/build_model/utils.py |
sha256=abR8dRKYFI9lBag9XRa1C6PcLXOgJWarQ5gz7vmQZkQ
|
3366 |
omicverse/mofapy2/core/BayesNet.py |
sha256=ObMm7K-loFWj2A4mDA9hVsGa9n4_FoShVs7iqM71DDo
|
26036 |
omicverse/mofapy2/core/__init__.py |
sha256=alIDGBnxWH4JvP-UW-7N99seBBi0r1GV1h8f1ERFBec
|
21 |
omicverse/mofapy2/core/gp_utils.py |
sha256=dUuHgYI-StRewQcayLtqVikyeojKhxcsMOrDbuD4uT4
|
5591 |
omicverse/mofapy2/core/gpu_utils.py |
sha256=jxUZimbaKgIVGXRgDSWyM2mVmkufDMMVc-yJyEumzp8
|
1765 |
omicverse/mofapy2/core/utils.py |
sha256=1qDiIyeKsS7pLqpbPY9X3Z-6cy-ObQF34IqtjG4eT38
|
3764 |
omicverse/mofapy2/core/distributions/__init__.py |
sha256=22zpsvBormV3D2VS1ywMDnycgr3Onxn-ZWuKSIU8pn8
|
448 |
omicverse/mofapy2/core/distributions/basic_distributions.py |
sha256=TUDPvP9x7le_4sarDMgG5bumMQsDvIrY9-l-TmtdG94
|
3923 |
omicverse/mofapy2/core/distributions/bernoulli.py |
sha256=5FlK4qO21x4sBlpPlQ0_8bwcBVjkBYtJTYtk7nXaHtU
|
1301 |
omicverse/mofapy2/core/distributions/bernoulli_gaussian.py |
sha256=2Kmrs8W0ve1QtpfqrfhyNi0Ova-RgGiF4OuaBws1zLA
|
4709 |
omicverse/mofapy2/core/distributions/beta.py |
sha256=M8KEwfUNMTJPLIaIA9XHFI86IqdFUmrpOSy_qtrtuJ4
|
1859 |
omicverse/mofapy2/core/distributions/binomial.py |
sha256=XHQjcgWFjs-1v4hz40QDDafFr5vGTQqm9tZD8gm2EMk
|
1928 |
omicverse/mofapy2/core/distributions/gamma.py |
sha256=q3Wnrh9TV_kKB3yo5OqYxe3bqofEoGP0LO5UUwz37ds
|
2061 |
omicverse/mofapy2/core/distributions/multi_task_GP.py |
sha256=UTOScYCd_873k4yw3mJqpfQbpbuLLdRvduqWpEE6ucs
|
38150 |
omicverse/mofapy2/core/distributions/multivariate_gaussian.py |
sha256=0JbwA1cV47MGTj2ZOorhlVaLRm_h-y03rHkTbvGeEJM
|
16083 |
omicverse/mofapy2/core/distributions/poisson.py |
sha256=T98xKiHKciV_A1yUaobkUM75cmiVNFcJklFJTg5xg6Y
|
1663 |
omicverse/mofapy2/core/distributions/univariate_gaussian.py |
sha256=7vCzrWFnl8sxN0sj_s4IRsn4Xbghh4n5E0oLnj9iYY8
|
2223 |
omicverse/mofapy2/core/nodes/Alpha_nodes.py |
sha256=PThH0bx0E9akWZy3AQN6d7FCXPBh7xKrapzPTEKFwIA
|
6291 |
omicverse/mofapy2/core/nodes/Kc_node.py |
sha256=sW_XZmdw7YuMXNogwGY8iz-Lc6Z-GvsGugJtnQaNLCw
|
4646 |
omicverse/mofapy2/core/nodes/Kg_node.py |
sha256=KXdV3dBM6vYuQLbULuERyO3FE1zuZMqp49qO0NKMAe8
|
3581 |
omicverse/mofapy2/core/nodes/Sigma_node.py |
sha256=MB7CJxfCaGYIUAo00FnYEFBBjdRhmWQRY-8feMNJqTI
|
49309 |
omicverse/mofapy2/core/nodes/Tau_nodes.py |
sha256=iHUvNkYD8YsEut1MYqknX2tpSuh-XKMWwHC-cxW-CmU
|
5327 |
omicverse/mofapy2/core/nodes/Theta_nodes.py |
sha256=PBa5wFfnDMHTpbzThOgOaOVDFEXiD5pyknFNu3AjzPs
|
6551 |
omicverse/mofapy2/core/nodes/U_nodes.py |
sha256=pEBfbA-4i_9vbYwcWtqlHR-FR4gHaoWn59ZgL8-NyGI
|
7911 |
omicverse/mofapy2/core/nodes/W_nodes.py |
sha256=01J0XcC4f5xYvET5kv3VoDghkdRHAe8e5sZXhbrrFIM
|
10037 |
omicverse/mofapy2/core/nodes/Y_nodes.py |
sha256=NjvlaqDEvFAlj3EIrBN9tRAMnRk00H3NXRqHEQf_rqk
|
3577 |
omicverse/mofapy2/core/nodes/Z_nodes.py |
sha256=ql8BIRbXnHzUbYzxnt3stKyx7FpVR2CArt5yMsax4Xc
|
15625 |
omicverse/mofapy2/core/nodes/Z_nodes_GP.py |
sha256=ojJ9zdS0hJSY7MmbBo_5fpCAQrOEQbhrXjTI1c_1_DU
|
9248 |
omicverse/mofapy2/core/nodes/Z_nodes_GP_mv.py |
sha256=zVmtFsubZpc-m08vN9eQmUaVpXWOsnAvbiADmAGm-80
|
8127 |
omicverse/mofapy2/core/nodes/ZgU_node.py |
sha256=dOhDwvj4UzI7-U1mm3-sRkz4ViyLgq7-Yrp28lanOUk
|
7505 |
omicverse/mofapy2/core/nodes/__init__.py |
sha256=3wjycqAVqgp6bvN58BRrQkUGNtneFIIvCAW0wjwi4Y4
|
581 |
omicverse/mofapy2/core/nodes/basic_nodes.py |
sha256=by4VjuvsBf6rT_Yd-unEFhjFgJ4cXDlMNbrNn3elPJA
|
3812 |
omicverse/mofapy2/core/nodes/multiview_nodes.py |
sha256=IX304re7YUw5ItLHQQff9PoQ51HmGcIDs3ZmZeD2JiY
|
6837 |
omicverse/mofapy2/core/nodes/nongaussian_nodes.py |
sha256=XDvsNx2I5h6yKhmsp0jDXOoCcF6SbWB2TcdMP1D9uuY
|
21096 |
omicverse/mofapy2/core/nodes/variational_nodes.py |
sha256=Yg9rOcCL6rHhetd7hIa38cBygARd8nyoVIWrH-IV-Go
|
11994 |
omicverse/mofapy2/run/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
omicverse/mofapy2/run/entry_point.py |
sha256=9BbUQ4pKdCaRqgrHX0SuMVzJWp4ekJalPvC5O3vYCu0
|
70968 |
omicverse/mofapy2/run/test_data/view_0.txt |
sha256=flkJuQnQD2swkJlfMIaOeUb4GoCBjnfmqNPLXJ0jY1w
|
324931 |
omicverse/mofapy2/run/test_data/view_1.txt |
sha256=NN4_hYrzeu_5OFOCPb1r4SWChzYWBSFe3sW-EyITARY
|
324642 |
omicverse/mofapy2/run/test_data/view_2.txt |
sha256=_3LKVplNDL-EdAwcgqvs1hLHa1ztxOfZtPWi1oj8lms
|
324951 |
omicverse/mofapy2/run/test_data/with_nas/500_0.txt |
sha256=yNtbFSrg8Hz7C6WXlu4d6gJU3go-bqorAsnDYmthqjM
|
996145 |
omicverse/mofapy2/run/test_data/with_nas/500_1.txt |
sha256=YzYBx7P_Exdzf5kxhNnlfBLMEZdpqsDlc7LekxExRkQ
|
996423 |
omicverse/mofapy2/run/test_data/with_nas/500_2.txt |
sha256=xMM9Q0GFmZkC8h6wsjpJ5hlVeLmphYML7Ne1RfHibdY
|
995502 |
omicverse/mofapy2/simulate/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
omicverse/mofapy2/simulate/simulate_mofa.py |
sha256=suAw-Ehcn0pNefcy-i3e-KHljM98taJrazZfsqCbaAQ
|
6509 |
omicverse/nocd/__init__.py |
sha256=sPRgykQ3Wxhvr9ujnM7A6oJtnlrreL2FD2QxXKsFglA
|
120 |
omicverse/nocd/data.py |
sha256=AbaYucpJjetEiHLLXi6FfP2_694uPMF9GFmJLiHWffc
|
2163 |
omicverse/nocd/generate.py |
sha256=ILHt80gOxM4qZzy-kYFQ7wkz6DSvnpn6ATtXELl71U0
|
1301 |
omicverse/nocd/sampler.py |
sha256=dYPp2JjUSJxIkP7bQaUrre-k-65sbJt8tUFqAOrCGR0
|
1681 |
omicverse/nocd/train.py |
sha256=Kwk5QtuvvmCxq-nVmBioSVtixMYsjxY2tZtZf_pW0HM
|
4558 |
omicverse/nocd/utils.py |
sha256=hZm3pozPZj9fO_iePD-u2N1xOYPatoduPxCXJ3WNqck
|
5051 |
omicverse/nocd/.ipynb_checkpoints/generate-checkpoint.py |
sha256=ILHt80gOxM4qZzy-kYFQ7wkz6DSvnpn6ATtXELl71U0
|
1301 |
omicverse/nocd/.ipynb_checkpoints/sampler-checkpoint.py |
sha256=dYPp2JjUSJxIkP7bQaUrre-k-65sbJt8tUFqAOrCGR0
|
1681 |
omicverse/nocd/.ipynb_checkpoints/train-checkpoint.py |
sha256=Kwk5QtuvvmCxq-nVmBioSVtixMYsjxY2tZtZf_pW0HM
|
4558 |
omicverse/nocd/.ipynb_checkpoints/utils-checkpoint.py |
sha256=hZm3pozPZj9fO_iePD-u2N1xOYPatoduPxCXJ3WNqck
|
5051 |
omicverse/nocd/metrics/__init__.py |
sha256=mMC9lt8YvC7jccHADMGRy02bKahwWF9LB524WlhsAic
|
54 |
omicverse/nocd/metrics/supervised.py |
sha256=GaAiNIKghU3Ry88i0RFpP8pBX2gGOEVLDLrqwxaIZkA
|
4068 |
omicverse/nocd/metrics/unsupervised.py |
sha256=R9HTG8XnvSFrdwCKll0lVGHXyo5R2HF7PjXM-PrSo_Y
|
3214 |
omicverse/nocd/metrics/.ipynb_checkpoints/supervised-checkpoint.py |
sha256=GaAiNIKghU3Ry88i0RFpP8pBX2gGOEVLDLrqwxaIZkA
|
4068 |
omicverse/nocd/metrics/.ipynb_checkpoints/unsupervised-checkpoint.py |
sha256=R9HTG8XnvSFrdwCKll0lVGHXyo5R2HF7PjXM-PrSo_Y
|
3214 |
omicverse/nocd/nn/__init__.py |
sha256=YfoFuTrdI4dEB5OpZwVMmyB7bLZXXfnObgSw7GXWEbo
|
70 |
omicverse/nocd/nn/decoder.py |
sha256=CZRQpf27s2Fmir_Mw3426yAUmYfmeIyUXJ4s3w1Aszs
|
4453 |
omicverse/nocd/nn/gcn.py |
sha256=ejYBUvTiCbHdYPqSlWB6JqAOLKne23MLAkXWetx08K4
|
3505 |
omicverse/nocd/nn/imrpoved_gcn.py |
sha256=hMzW4tHKSyck8kURfygvuiUw0bITcp9iT9Af9y7pAmQ
|
3610 |
omicverse/nocd/nn/.ipynb_checkpoints/__init__-checkpoint.py |
sha256=YfoFuTrdI4dEB5OpZwVMmyB7bLZXXfnObgSw7GXWEbo
|
70 |
omicverse/nocd/nn/.ipynb_checkpoints/decoder-checkpoint.py |
sha256=CZRQpf27s2Fmir_Mw3426yAUmYfmeIyUXJ4s3w1Aszs
|
4453 |
omicverse/nocd/nn/.ipynb_checkpoints/gcn-checkpoint.py |
sha256=ejYBUvTiCbHdYPqSlWB6JqAOLKne23MLAkXWetx08K4
|
3505 |
omicverse/nocd/nn/.ipynb_checkpoints/imrpoved_gcn-checkpoint.py |
sha256=hMzW4tHKSyck8kURfygvuiUw0bITcp9iT9Af9y7pAmQ
|
3610 |
omicverse/palantir/__init__.py |
sha256=_GBoNVxb6FzUwdE0U2lG_N5Ub7VBhgOEAUDO-ezLxog
|
306 |
omicverse/palantir/config.py |
sha256=-x1U0II8-RsmmUnPO8uve6eucJ8-TpHgfzQeFPa5Rr8
|
248 |
omicverse/palantir/core.py |
sha256=KHLhowM4UtOZg4PjWMlaFQiTf3qaCZBYnR3PQ5gxGaE
|
20843 |
omicverse/palantir/io.py |
sha256=9glthlGyuGzkayxMc4HYSoyzCQs_kTs9hlKqfJCc7l8
|
3481 |
omicverse/palantir/plot.py |
sha256=0LZLRXIgShht3SSvyZoC6icSLPkVr_eo4gktjQsLpJo
|
73306 |
omicverse/palantir/preprocess.py |
sha256=wma9rnTAqASW7IkXAi9JOUMWIDfZ0Wu72f972CVYIx8
|
1459 |
omicverse/palantir/presults.py |
sha256=t6Yv-iANLrOgq6u8FxgwdbxNmyyNWs3PPTeayqyC8mA
|
20923 |
omicverse/palantir/utils.py |
sha256=Owp30QWxE0im2GeyezwW3vPt8lKWUWlBpjLvDl9wzPc
|
33510 |
omicverse/palantir/validation.py |
sha256=Jnph2BXaP212MFnbnCS3intiNNn0MsVELtP0F7JJDbA
|
5570 |
omicverse/palantir/version.py |
sha256=hys1ssjAaDm-CQ4lXl_39Uph5W5MO0EzbJ3Mg14XWBw
|
107 |
omicverse/pl/__init__.py |
sha256=KQvmTmDpBbmEvU5QGkBkA1UCVJet1N4AAwkiX3O97PA
|
137 |
omicverse/pl/_bulk.py |
sha256=YWT0-Bka-h2D5Dbnm_HdbscvHtxlQo1fscBtFPZkG3U
|
10364 |
omicverse/pl/_general.py |
sha256=7CDU4NkpA4unOVw0HlYT7-eGWHiHa3wzHu-oJViO1lI
|
330 |
omicverse/pl/_heatmap.py |
sha256=79iP3dtN3mEsW3aDhVMO2Qb7lOiU9swdUckX7b27RSs
|
13984 |
omicverse/pl/_multi.py |
sha256=E4YYtbXUTSYIuPKzf-9o0aca2uIUCloANsf0iZiQIJg
|
7298 |
omicverse/pl/_palette.py |
sha256=lLhxBmBhTWcU8uUY5fgF7Tk6iMd4jZO1tpvImLjcYZ8
|
2921 |
omicverse/pl/_single.py |
sha256=D6Tmi64d3i-We3Av95Wz0_UWWlLtekP1zTgOOVDqAG0
|
26187 |
omicverse/pp/__init__.py |
sha256=NxB8p0AbJ_RPMKcmRwrd1aiaHr5F9T0LXftUfEEVHYM
|
600 |
omicverse/pp/_preprocess.py |
sha256=qeZXNxt3DMVQ5voiTKZZ38GBZZSvlr3aFnm8XyP_oy4
|
27228 |
omicverse/pp/_qc.py |
sha256=lnz9UAUvo4XSwPW3A-u5CxSeKkBiUVDT05oPPlzLbQY
|
17176 |
omicverse/single/.DS_Store |
sha256=I0CPlu1kXowSFsi8_ep4pMG3vIY2NPSL5nyBj3ibH_M
|
6148 |
omicverse/single/README.md |
sha256=XiX9jbol-6O_At0c2nfnxJgWbyZT-gcu7kVEzL_zUPg
|
8790 |
omicverse/single/_SCSA.py |
sha256=Nz9yoQ5prLedzSk7ZPi1Hx8jpVAPHKHsK6hJMPt7KGM
|
61426 |
omicverse/single/__init__.py |
sha256=OmqO3_yipDH-4fa6CtWC0BxMeqVlg7CY6T_m0Zbb4Hk
|
1215 |
omicverse/single/_anno.py |
sha256=d0d2JHkvilnpodAi8ryIVaW1yxYbZZX3vmqJQKjNTfo
|
28030 |
omicverse/single/_atac.py |
sha256=01lZnY-xEHNk6LUY_0NYJsQgU78t0NmX0sTavm_E9NQ
|
10196 |
omicverse/single/_aucell.py |
sha256=GFkF5QI83tPJYu8C2E11_1UVmI0I78m721PcQVyTWhY
|
9656 |
omicverse/single/_batch.py |
sha256=amlYhy8msCyPqcQM-OfiHoPGWfIg9hPxYYEwZ6Qa0Q0
|
3407 |
omicverse/single/_cefcon.py |
sha256=2KKSaO3kyjwOs6E2edZfP0yQPPCxvRvrACWkY9kcoTs
|
19489 |
omicverse/single/_cellfategenie.py |
sha256=q8JHDlm-RkCnp0Df_s2CT2qGmUhyVCB4rg6Psp4a3eo
|
32142 |
omicverse/single/_cosg.py |
sha256=mHvVMPrak2McdOIDvfcMXxb0Vop9iUlUeJ9d-Hm2l8g
|
21100 |
omicverse/single/_cpdb.py |
sha256=o7cHGYz0MTy1t7tJgfOAtOpoewChkPSItNH2sMenC4M
|
12142 |
omicverse/single/_ltnn.py |
sha256=-Dya-TCvcYGpy1eH_UlxVKsKIHNg8D-YT_59wLkw_9A
|
32028 |
omicverse/single/_mdic3.py |
sha256=YQxarp3lUCE5NHuFeA5GoaYRWn2oes0q_JGWN3-UtRE
|
20556 |
omicverse/single/_metacell.py |
sha256=tT-75XmFmHmXiC4bbmVFEGJ5l4PmP0xSOWYhPZOiNtU
|
5551 |
omicverse/single/_mofa.py |
sha256=QcC3rUNkMc7ac_oCf7dHcTATSz3pUswc_Ud1Mx9Xkmc
|
38177 |
omicverse/single/_nocd.py |
sha256=1-kN83f_DxWU_yuA1eIDFGYhUwsdG4AX_VEhVcDkhW8
|
11678 |
omicverse/single/_scannorl.py |
sha256=O272Y4h-J2W-hfKoYp4vD_K4chlMbzLLLPFXktO201o
|
4589 |
omicverse/single/_scdrug.py |
sha256=uuBCJ68R3TuqOb_aCg_XRJigrWwgCajzAeYA-opxPbo
|
18135 |
omicverse/single/_scgsea.py |
sha256=9uRm6zV1P9jPJfX3R-uuAcN6qBpVVVU_7VpDHhfAPUU
|
13608 |
omicverse/single/_seacells.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
omicverse/single/_simba.py |
sha256=y4cU61sSA5T9dTkyIVmyq3ruy7Mqw0-w3-Ixo7wikL0
|
7303 |
omicverse/single/_tosica.py |
sha256=0m6pVyIUBDS918AZNaQJ5ZUntJLcib9pwHommYOO9II
|
18296 |
omicverse/single/_traj.py |
sha256=QmfR6JCnqFcL8gpAkSmFfMT5B8WNKbDM-WQDqAmEs6Y
|
4218 |
omicverse/single/_via.py |
sha256=YxQbJI8gjKU9MQFH506lNHRAO7xlCrX04AnYpsKY6O4
|
76688 |
omicverse/space/__init__.py |
sha256=-09_s3fsmcJKFhBBg_dqC38ymZGTQl9K1V-xHq-t9I4
|
149 |
omicverse/space/_cluster.py |
sha256=I_dm0xOuhoNHE5USFhiaCcEZDXr28xV3MJSDzJC79Pw
|
4913 |
omicverse/space/_integrate.py |
sha256=0qIixsTQ09F8xM-VxD7GFJa2-PztgarHAgr7IrMClvc
|
12205 |
omicverse/space/_spaceflow.py |
sha256=rS86Yq8ejfwVkPllArQcz_iO4zodGQi8cjbLLav0iSQ
|
7451 |
omicverse/space/_tangram.py |
sha256=SJzi7-YRnaeZ3u9vY5ajyeSrklEnkZrQBA_NIwmmfaY
|
3292 |
omicverse/spaceflow/_SpaceFlow.py |
sha256=IkOFw4_BtfHOlAuktP7ywHjIjS3lqFVh42vrkGu9Q90
|
27318 |
omicverse/spaceflow/__init__.py |
sha256=Uo4HJa3tD7AJ_t7zbz3gFFGjR-YudEc1hpoYMxyH7qE
|
54 |
omicverse/spaceflow/_util.py |
sha256=Gla9c8BaBvfaNpIV2LK-VU2oU_lnj0dNmeS8rYsMOF0
|
361 |
omicverse/tape/__init__.py |
sha256=onidoQ7Xe0KMHGS84Y9iO7UV-EzoeXm8Z8ktIBYJdk0
|
108 |
omicverse/tape/deconvolution.py |
sha256=avZ951ZCDKsCqkH_QJTYxO4WoFO-xU1WKxwvf8O_0Qo
|
7521 |
omicverse/tape/model.py |
sha256=WyvzKdmzBghBhEgOFF41BBj8a1Zfh0J8YD_6WJPs3tg
|
7953 |
omicverse/tape/simulation.py |
sha256=rxiTNyKMGsy3Gqxw4n9OHLyJfXzgVkupY6wPJf51mFQ
|
6097 |
omicverse/tape/train.py |
sha256=Ow6EVWZifWMJ_nqnxaJm_U5bsqmEy1JJeqyISlycds4
|
6726 |
omicverse/tape/utils.py |
sha256=KYLnIoOc-98a6nKes-HN8WSE-9chAhJxa8uCws4Au18
|
6585 |
omicverse/tosica/TOSICA_model.py |
sha256=H_6tdOeQE3nrf3H13DRfg_VICav5cjNg7FQBMa3PPrA
|
11399 |
omicverse/tosica/__init__.py |
sha256=J4VjW4efB_qQC9OhQ7z7xyaoQBPSftu83S5L6Qjt7J0
|
184 |
omicverse/tosica/customized_linear.py |
sha256=5RqJSDoZ4xhzmzFvyIXgelKTOus8mRFz12N29wvGpkU
|
5669 |
omicverse/tosica/pre.py |
sha256=20X4uC5sopAn7BKFhzyCpMvy3b3QqGZUDQFyEj7R1wE
|
11304 |
omicverse/tosica/train.py |
sha256=XA2v-08Q06zD-7JCusyUeX5lxWa4PSEIZsD80ESb8HU
|
13384 |
omicverse/utils/__init__.py |
sha256=2Fxv7unXhFllY_lW8muSRfvk8TRxia9wkL6glCrVziQ
|
1111 |
omicverse/utils/_cluster.py |
sha256=S0o7tM5YTZWtsU6HSSKc5a-xQcRH-Jd55qs7b7jEWWM
|
6217 |
omicverse/utils/_data.py |
sha256=PmC80ewf7jNIyE1gKdvdiooyoes6kd1cfHwYsWnPdT0
|
21401 |
omicverse/utils/_enum.py |
sha256=WhGJjcR4T-dxJ1m7Bu_UXOJpI3vfg4W4BcREpOwjpT0
|
2343 |
omicverse/utils/_genomics.py |
sha256=QcQSqBpBamMmPtd42nhKtmrhjMM9Z65HNU4mhq6hy8Q
|
20217 |
omicverse/utils/_heatmap.py |
sha256=3cgXTfVMnsy25bZJodHH7WChw8NTPUKx1F2SXOkGYs4
|
20837 |
omicverse/utils/_knn.py |
sha256=iVqQOCN8u7UrL7qx15iI53Ltuj02R5ueXdv6ecM9mvg
|
5370 |
omicverse/utils/_mde.py |
sha256=yJ3dh6hmHEKC9jifqOvLxSjhjx3_k1MKYq7UvRxSETI
|
2520 |
omicverse/utils/_paga.py |
sha256=_c1zEcqAdprZ3zEUNtVNjEcEnf0mhwOJjhf93YtB6Ms
|
16487 |
omicverse/utils/_plot.py |
sha256=2AHHTuRlVYc5RzlQrDQ522Lmhp-wSKALG87C40nzfIY
|
38859 |
omicverse/utils/_roe.py |
sha256=CXjVJjbAgGbXHibMde48b6iLKGO2tGXiinawrOI-3Gw
|
5008 |
omicverse/utils/_scatterplot.py |
sha256=j2Lzc0_SwJuHpZlmnGJxUF81rIcrwWP4LBTDI4KoCYw
|
48995 |
omicverse/utils/_syn.py |
sha256=mHAaGISWRFU2hiaY9Dc0TznXnux4_mM1AquhbzXA3TE
|
4169 |
omicverse/utils/_venn.py |
sha256=tzpJSvM4l0PF7mxB5WH64mixtedI8PJYaIBQe_XWBAw
|
5765 |
omicverse/via/__init__.py |
sha256=C2K7dL4ai2LnNkpNrijzJtqZ8aWLOpGlY_XAy9PrTpk
|
143 |
omicverse/via/core.py |
sha256=E6mm59wnBbS8errllMI_SrjMkxyTsf5dHfGFzXOnzo8
|
195095 |
omicverse/via/datasets_via.py |
sha256=yuVOw_sb1miKxPY6m1vg0b8WvW9CgIpcl2poG43NRSc
|
10436 |
omicverse/via/examples.py |
sha256=cz9L_b5d9xeFVy4r2BvdDVnRw0Lsp7TUgChEb5f95Vw
|
160696 |
omicverse/via/plotting_via.py |
sha256=8oeYixIx0zVdsHvwPycxiLD_H5-_Px0qPxGxMqmlXE0
|
145530 |
omicverse/via/utils_via.py |
sha256=H8_5Ev_cCRTks0pnm9CFesEoMDX-y4RprnddS7Pjofk
|
75612 |
omicverse/via/windmap.py |
sha256=09izB4hH-hsThKx9udlKlvBxAhmvhbeFXl45sy-ghtQ
|
7987 |
omicverse/via/.idea/VIA.iml |
sha256=w0TW3o9qEaYr1iYR1jwYqlUBYm3KyxgnCK1PD03XvwQ
|
441 |
omicverse-1.5.8.dist-info/LICENSE |
sha256=IwGE9guuL-ryRPEKi6wFPI_zOhg7zDZbTYuHbSt_SAk
|
35823 |
omicverse-1.5.8.dist-info/WHEEL |
sha256=EZbGkh7Ie4PoZfRQ8I0ZuP9VklN_TvcZ6DSE5Uar4z4
|
81 |
omicverse-1.5.8.dist-info/METADATA |
sha256=fHduAnG7Ti74t4sGpigJNT_DQMavHzK3Yt7eSKKaTZA
|
11314 |
omicverse-1.5.8.dist-info/RECORD |
— |
— |