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orthomap

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0.0.1 orthomap-0.0.1-py3-none-any.whl

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Project: orthomap
Version: 0.0.1
Filename: orthomap-0.0.1-py3-none-any.whl
Download: [link]
Size: 56579
MD5: 9e1c5fca84efbde70b86510a352763fc
SHA256: 2771568503bad85e1cd83c3a481a12dd3e93698f6226c5925619c928809900f2
Uploaded: 2023-04-05 21:05:36 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: orthomap
Version: 0.0.1
Summary: extract orthomap from OrthoFinder output for query species
Author-Email: Kristian K Ullrich <ullrich[at]evolbio.mpg.de>, Nikoleta E Glynatsi <glynatsi[at]evolbio.mpg.de>
Maintainer-Email: Kristian K Ullrich <ullrich[at]evolbio.mpg.de>
Project-Url: Homepage, https://github.com/kullrich/orthomap
Project-Url: Bug Tracker, https://github.com/kullrich/orthomap/issues
Project-Url: documentation, https://orthomap.readthedocs.io/en/latest/
Project-Url: repository, https://github.com/kullrich/orthomap
License: GPLv3
Keywords: orthomap,gene age,orthologs,phylostratigraphy,single-cell
Classifier: Development Status :: 3 - Alpha
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Education
Requires-Python: >=3.8
Requires-Dist: setuptools (>=67.5.1)
Requires-Dist: numpy (<1.24)
Requires-Dist: numba
Requires-Dist: scipy
Requires-Dist: pandas (>=1.5.3)
Requires-Dist: ete3
Requires-Dist: anndata
Requires-Dist: scanpy (>=1.9.3)
Requires-Dist: seaborn
Requires-Dist: statannot
Requires-Dist: harmonypy (>=0.0.9)
Requires-Dist: louvain (>=0.8.0)
Requires-Dist: umap-learn (>=0.5.3)
Requires-Dist: alive-progress
Requires-Dist: biopython
Requires-Dist: wget (>=3.2)
Requires-Dist: pytest
Requires-Dist: pip
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 11249 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.40.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
orthomap/__init__.py sha256=KxbEwCYcMquySqqxSH7sA6m8veFFK4HFZDmzvHr-Cmk 190
orthomap/__main__.py sha256=MY8X1g_2Ws6XAWZn9Pcb8kFRFnXKVWCSmx7Kp-v-b4Q 10417
orthomap/cds2aa.py sha256=62tUUHLPQcIb6cvOGwk9boTkZc6XOvQsOhBx4d5w3UU 66642
orthomap/datasets.py sha256=0pXMMdmpPeyIw6vUZ5PIfjg0R4oBqNvNQvTOHySlVSA 16611
orthomap/eggnog2orthomap.py sha256=71wYVICTc9_kY4_Unfxype2NuuWHHJ0zdtaVfhoIBso 11333
orthomap/gtf2t2g.py sha256=lZZte_kEmn2XpP-mOBULjj13iOTy_vmXY3gaPaV6tPs 12919
orthomap/ncbitax.py sha256=yFu20L9DC2_FTUmrn7qBw69TRdvdZhRbv7EO1MCSEls 1936
orthomap/of2orthomap.py sha256=jvnNnskGYrCt-NlmdAH5XojWDBs84XeNmDVVZpj0YMw 17236
orthomap/orthomap2tei.py sha256=dP3iBwoNSvtLbmEnc8GxUwrzZuZbNVxzxx9HNExKTwY 87050
orthomap/plaza2orthomap.py sha256=4k-YJynJ6vuB_p4Z5MwInbLyv0MODVCQx7Xqs6sY7dQ 11652
orthomap/qlin.py sha256=9lYnQ13wtEpWvCCZbx9TagM9U5OODQU9XNPyYfFfC_U 7570
orthomap-0.0.1.dist-info/LICENSE sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY 35149
orthomap-0.0.1.dist-info/METADATA sha256=4w0UbdZJK5BVZlzs13zpcCv6Tgb8ovj7nn52rU3zRbU 12887
orthomap-0.0.1.dist-info/WHEEL sha256=pkctZYzUS4AYVn6dJ-7367OJZivF2e8RA9b_ZBjif18 92
orthomap-0.0.1.dist-info/entry_points.txt sha256=S_miRp9MV_jHy-yZZ3-TSbg9cOOteWtBxg-FOmCOjN8 306
orthomap-0.0.1.dist-info/top_level.txt sha256=SefqGeMg58fPw6XUNfYSs7pW8T6t9wHE0fQuR_xuzIU 9
orthomap-0.0.1.dist-info/RECORD — —

top_level.txt

orthomap

entry_points.txt

[console_scripts]
cds2aa = orthomap.cds2aa:main
eggnog2orthomap = orthomap.eggnog2orthomap:main
gtf2t2g = orthomap.gtf2t2g:main
ncbitax = orthomap.ncbitax:main
of2orthomap = orthomap.of2orthomap:main
orthomap = orthomap.__main__:main
plaza2orthomap = orthomap.plaza2orthomap:main
qlin = orthomap.qlin:main