pertpy

View on PyPIReverse Dependencies (1)

0.7.0 pertpy-0.7.0-py3-none-any.whl

Wheel Details

Project: pertpy
Version: 0.7.0
Filename: pertpy-0.7.0-py3-none-any.whl
Download: [link]
Size: 202207
MD5: 80dabd99271a9257f9e98f1c06b48d7c
SHA256: 1b42949906c8554d35728b85441534753035875ed6ce84cf784a86ef6a964d70
Uploaded: 2024-04-14 11:26:59 +0000

dist-info

METADATA

Metadata-Version: 2.3
Name: pertpy
Version: 0.7.0
Summary: Perturbation Analysis in the scverse ecosystem.
Author: Lukas Heumos, Yuge Ji, Alejandro Tejada, Johannes Köster, Emma Dann, Xinyue Zhang, Xichen Wu, Amir Moinfar, Sergei Rybakov, Tessa Green, Stefan Peidli, Antonia Schumacher, Lilly May
Maintainer-Email: Lukas Heumos <lukas.heumos[at]posteo.net>
Project-Url: Documentation, https://pertpy.readthedocs.io
Project-Url: Source, https://github.com/theislab/pertpy
Project-Url: Home-page, https://github.com/theislab/pertpy
License: MIT License Copyright (c) 2021, Lukas Heumos Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Classifier: Development Status :: 4 - Beta
Classifier: Environment :: Console
Classifier: Framework :: Jupyter
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Visualization
Requires-Python: >=3.10
Requires-Dist: adjusttext
Requires-Dist: arviz
Requires-Dist: blitzgsea
Requires-Dist: decoupler
Requires-Dist: muon
Requires-Dist: numpyro
Requires-Dist: openpyxl
Requires-Dist: ott-jax
Requires-Dist: pubchempy
Requires-Dist: pyarrow
Requires-Dist: requests
Requires-Dist: rich
Requires-Dist: scanpy[leiden]
Requires-Dist: scikit-misc
Requires-Dist: scipy
Requires-Dist: scvi-tools
Requires-Dist: sparsecca
Requires-Dist: toytree
Requires-Dist: ete3; extra == "coda"
Requires-Dist: pyqt5; extra == "coda"
Requires-Dist: pre-commit; extra == "dev"
Requires-Dist: docutils (!=0.18.*,!=0.19.*,>=0.8); extra == "doc"
Requires-Dist: furo; extra == "doc"
Requires-Dist: ipykernel; extra == "doc"
Requires-Dist: ipython; extra == "doc"
Requires-Dist: myst-nb; extra == "doc"
Requires-Dist: myst-parser; extra == "doc"
Requires-Dist: nbsphinx; extra == "doc"
Requires-Dist: nbsphinx-link; extra == "doc"
Requires-Dist: pyenchant; extra == "doc"
Requires-Dist: pygments; extra == "doc"
Requires-Dist: sphinx-autodoc-typehints; extra == "doc"
Requires-Dist: sphinx-automodapi; extra == "doc"
Requires-Dist: sphinx-copybutton; extra == "doc"
Requires-Dist: sphinx-design; extra == "doc"
Requires-Dist: sphinx-gallery; extra == "doc"
Requires-Dist: sphinx-last-updated-by-git; extra == "doc"
Requires-Dist: sphinx-remove-toctrees; extra == "doc"
Requires-Dist: sphinx (>=4); extra == "doc"
Requires-Dist: sphinxcontrib-bibtex (>=1.0.0); extra == "doc"
Requires-Dist: sphinxext-opengraph; extra == "doc"
Requires-Dist: coverage; extra == "test"
Requires-Dist: pytest; extra == "test"
Provides-Extra: coda
Provides-Extra: dev
Provides-Extra: doc
Provides-Extra: test
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 1605 characters]

WHEEL

Wheel-Version: 1.0
Generator: hatchling 1.22.5
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
pertpy/__init__.py sha256=HI_6a6S0V2YQmRZrlopJ9fxrHVEsBc0GhcX-fZZQCWk 600
pertpy/py.typed sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
pertpy/data/__init__.py sha256=zj4jWyw_Dr6HJvdznQi9QUkZCoFN6vdFRhFF_tw4jts 1275
pertpy/data/_dataloader.py sha256=UTIFK2pofjO6HJjj1dJRbZiQ04_Sslg0d6ggBRkaTnk 2325
pertpy/data/_datasets.py sha256=78RQb4lGFhCDQdAwb8p_MYy4ZxFjRhhfAsKkuWMl5EQ 63179
pertpy/metadata/__init__.py sha256=9FC_FfcpGTsc3j5orjr3USkfsT63REnQBy4r7_VRjco 171
pertpy/metadata/_cell_line.py sha256=tA17gWp9uY0jn36S5bt5lfc9zU2HC2DxZ6x5jVRUosU 40644
pertpy/metadata/_compound.py sha256=Y1oaV_Nq4-wDVFPQhenJTjvOlY4HYi8bCxUUN3VNbMc 4861
pertpy/metadata/_drug.py sha256=q3snazwU_wTLC3Js-9pr_CvfBCRGuFBLlHSFVV-h3ko 9357
pertpy/metadata/_look_up.py sha256=Tb9BHZVc05aH4Kg2KLcfrgvra8gEV5aBqwAZ433krMc 29476
pertpy/metadata/_metadata.py sha256=h_m5bjn_DvCOuiie_q_DB6eM9ermJKXSnLJ0i84AGqI 3419
pertpy/metadata/_moa.py sha256=gLjM59ANqK5Ov-Y-v6COr5Bz4nI2O_LEBfJ2jRpR5U8 4941
pertpy/plot/__init__.py sha256=ZbOAZMpnnAy8GR8oSXJhuwA3gr9GDqgzx0fEkz0TFaE 257
pertpy/plot/_augur.py sha256=uHBoKVeNMcQUV23eHX_k3KQ4sa7wJUxn8VYgoGM0XSw 6713
pertpy/plot/_coda.py sha256=qZfkfFT61pwf-rlOYPwJiYDkx_1DTkT4TfG9fObQWoc 26891
pertpy/plot/_guide_rna.py sha256=iIjkOus7tftIv01zaCTamSX2q8bHBI8O4dxv6QDRVM0 2702
pertpy/plot/_milopy.py sha256=LGMJ4UQFAoRXtBC5LrUtskCU3YEQLzGvMOPuxBg1Tak 7414
pertpy/plot/_mixscape.py sha256=wKsY1efBP9VtQptAq79w5-ODcgzomD3QgW8iOF-5LZY 14862
pertpy/preprocessing/__init__.py sha256=uja9T469LLYQAGgrTyFa4MudXci6NXnAgOn97FHXcxA 40
pertpy/preprocessing/_guide_rna.py sha256=9FSu0QCxZujGPxhl-PcU4yRR7ZSGhgg99eJaLmf8hRA 7713
pertpy/tools/__init__.py sha256=zs_xmmmefEFbOQFMFhh_ds9StyuZ1iiSDdk4qhNlQq4 931
pertpy/tools/_augur.py sha256=Lws7-oSjSFGRupoloj7yIA3YNvVt_dcjSnQ8_Ctt2u0 55797
pertpy/tools/_cinemaot.py sha256=EbnucYl-Q3sfPDL9RiA-cXjpGFJYvfF4CaDEkyr7Snc 39501
pertpy/tools/_dialogue.py sha256=u98h147h2PwhWxFQo8limNmt20e2r5La9-wZvS6tXjo 52143
pertpy/tools/_differential_gene_expression.py sha256=eqit0SJ_fIpSYRS5grYZxEln_JkpXyng-q3LUw9ArY8 14360
pertpy/tools/_enrichment.py sha256=U2WY7t--FCQFZsXXBLZYBwF4WO9t5WToWjCGn_-tP6I 21922
pertpy/tools/_kernel_pca.py sha256=3S1D_wrp4vlHUPiRbCAoRbUyY-rVs112Qh-BZHSmTxE 1578
pertpy/tools/_milo.py sha256=SxpEjhvn2FOYQcQ56tG9ts8fS2vpp4DsB3V7lr8QHbc 43388
pertpy/tools/_mixscape.py sha256=5s0BrLsv1uv1tbZkZnNXN2qUzWjxvIuGe2iu9czBIxA 52500
pertpy/tools/decoupler_LICENSE sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY 35149
pertpy/tools/transferlearning_MMD_LICENSE sha256=MUvDA-o_j9htRpI8fStVdCRuyLdPkQUuIH0a_EIc57w 1069
pertpy/tools/_coda/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
pertpy/tools/_coda/_base_coda.py sha256=L6OEz7PHDve_geS6JdyjMC5fSMNitZ4pYQOyMjSW04E 115262
pertpy/tools/_coda/_sccoda.py sha256=K_zsU8z_YP1hwJV1Urug4fd7kS-q23eLkcSsX_hxqYg 22849
pertpy/tools/_coda/_tasccoda.py sha256=xTe89TMtbUkw7WAEAvWzOQsMotdekP3Vs5zhMtB2t6c 31033
pertpy/tools/_distances/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
pertpy/tools/_distances/_distance_tests.py sha256=aC4zspn4nJ2JRk56c76xTgSxl9znY7QI7zLktwsQ8SY 13604
pertpy/tools/_distances/_distances.py sha256=_dB9dyqWvg_yJBMJTuruFw5w-CLtQWqol-28KVifPBM 35619
pertpy/tools/_perturbation_space/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
pertpy/tools/_perturbation_space/_clustering.py sha256=a1p0vzjN9nsmtWXWaKIeR3To3mL-7mzqD3HTTiHCpRk 3470
pertpy/tools/_perturbation_space/_discriminator_classifiers.py sha256=JYDPJlyqxeFbBqWqXk0el6ClXIwrUIYTye5ehmQvmao 22080
pertpy/tools/_perturbation_space/_metrics.py sha256=y8-baP8WRdB1iDgvP3uuQxSCDxA2lcxvEHHM2C_vWHY 3248
pertpy/tools/_perturbation_space/_perturbation_space.py sha256=VwwYjQ8-VfRHp8_97Id320xd3tnvv-wea6iLFkRE0RY 18868
pertpy/tools/_perturbation_space/_simple.py sha256=37zZweW-50Oa8pTQyC53KyNZQH157HurSc8qXZZt7JA 12681
pertpy/tools/_scgen/__init__.py sha256=neOj3JEcXxnIvgSMrSuPaUSGl1upo7yQ7K_NXHb8Rb8 45
pertpy/tools/_scgen/_base_components.py sha256=dIw-_7Z8iCietPF4tnpM7bFHtDksjnaHXwUjp9GoCIQ 2936
pertpy/tools/_scgen/_scgen.py sha256=qPu_zWCdLvcuOqSDNb2FLzxE5Y1uH0uSbpPGu7kOKks 30705
pertpy/tools/_scgen/_scgenvae.py sha256=v_6tZ4wY-JjdMH1QVd_wG4_N0PoaqB-FM8zC2JsDu1o 3935
pertpy/tools/_scgen/_utils.py sha256=y0LGS1OLmIVUBq2ZYySM2Up51o3c08-yjTvUkFb3E0U 2841
pertpy-0.7.0.dist-info/METADATA sha256=tSfWThb8uxC4jwbO5VfOIikt8DRBpO4UdHdFde0al3w 5782
pertpy-0.7.0.dist-info/WHEEL sha256=as-1oFTWSeWBgyzh0O_qF439xqBe6AbBgt4MfYe5zwY 87
pertpy-0.7.0.dist-info/licenses/LICENSE sha256=OZ-ZkXM5CmExJiEMM90b_7dGNNvRpj7kdE-49AnrLuI 1070
pertpy-0.7.0.dist-info/RECORD