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poreplex

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Wheel Details

Project: poreplex
Version: 0.5
Filename: poreplex-0.5-cp37-cp37m-manylinux1_x86_64.whl
Download: [link]
Size: 942768
MD5: 85cf1f0185dc38e2ed4a3b981bbe95ea
SHA256: c4439351df5d261df8cd64b52266842ab68254af83d5ce712099a3203e1794db
Uploaded: 2019-10-18 05:36:55 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: poreplex
Version: 0.5
Summary: A versatile sequence read processor for nanopore direct RNA sequencing
Author: Hyeshik Chang
Author-Email: hyeshik[at]snu.ac.kr
Home-Page: https://github.com/hyeshik/poreplex
Download-Url: https://github.com/hyeshik/poreplex/releases
License: MIT
Keywords: nanopore,direct RNA sequencing,barcode,demultiplexing
Classifier: Development Status :: 3 - Alpha
Classifier: Environment :: Console
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Healthcare Industry
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: POSIX
Classifier: Programming Language :: Python
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Dist: PyYAML (>=3.0)
Requires-Dist: h5py (>=2.7.0)
Requires-Dist: mappy (>=2.10)
Requires-Dist: numpy (>=1.14)
Requires-Dist: pandas (>=0.22.0)
Requires-Dist: pomegranate (>=0.10)
Requires-Dist: progressbar33 (>=2.4)
Requires-Dist: pysam (>=0.14.0)
Requires-Dist: scipy (>=1.0)
Requires-Dist: urwid (>=2.0.0)
Requires-Dist: tensorflow (>=1.8.0)
Requires-Dist: inotify (>=0.2.9); extra == "full"
Requires-Dist: inotify (>=0.2.9); extra == "live"
Provides-Extra: live
Provides-Extra: full
Provides-Extra: full
Provides-Extra: live
Description-Content-Type: text/markdown
[Description omitted; length: 16885 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.31.1)
Root-Is-Purelib: false
Tag: cp37-cp37m-manylinux1_x86_64

RECORD

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poreplex/__main__.py sha256=fOvXAGOhW3P0pEQCROdlfUTLBNCRekB0T5SZBhgXTQA 45
poreplex/alignment_writer.py sha256=9AdTHcAKF3MnvlwbcMnfsY9lplADb7wIwGC7syNAgEE 6771
poreplex/barcoding.py sha256=nstUTMqN7aqdRN5zpn6d3rhJ8Cdr2wjon-5fUgBlLLE 5496
poreplex/basecall_albacore.py sha256=f3VhuEDGxz04CLtAliP1o3RhV0w7tjZjEMa29qPr7Tw 4710
poreplex/commandline.py sha256=w6it_0j_E8q9SwgixKjM66S-wextCglESwXxHl-D2uM 17505
poreplex/csupport.cpython-37m-x86_64-linux-gnu.so sha256=IY0svdfUqApnOUccq73HIxrqUUp2LcZzr8KUrOXSCFQ 56604
poreplex/dashboard.py sha256=ciWKCZvUe5ghQ0EGi3ge4eiYlNiCeQfydBVPOTMeU9c 19379
poreplex/fast5_file.py sha256=KsI2jH4jfQTC50NyHyV4mRpJynNfuo7Ko4zO00eDUoY 10214
poreplex/io.py sha256=1UkXSgbBbI8i1dN0kGwRai78N2eJdKvcwBWkyFeOxZ8 14971
poreplex/keras_wrap.py sha256=G6N8-aNbMrL7d777WV2OYDHGUaHvxg9wRjKU4_vWRxw 3597
poreplex/pipeline.py sha256=3bbWRfjk3pSz9b_6wmN6mDmvJrjOpR1a2hJrTBVRuew 22678
poreplex/polya.py sha256=2zlbMD-rvDjEAwmhH9-hBTFpk0EMa70azO8-IJhroOM 9192
poreplex/signal_analyzer.py sha256=8mucbicG3r8mgp8vc2zqYBWvDUDwkCLtn2rbpNNnhz0 18772
poreplex/signal_loader.py sha256=LJr5dLti8NaCjETcHTfU9ir2sFUuVPEpOH1p2H0BDuk 10919
poreplex/utils.py sha256=3AwKed9zhnvqYaYCGx24UGz-xGQdCYOsjxbMT0PcbD4 1904
poreplex/worker_persistence.py sha256=vrTnLhSWu7J_f3SQsI8Q5geJa9mkzUOR4mNxvjYB1WU 4669
poreplex/kmer_models/COPYRIGHT sha256=eIsxwdLkTaq1L0mip6oUtahYWQQcNTy0E5I9bMeW1XU 43
poreplex/kmer_models/LICENSE.md sha256=Lq0FY8Cv2lVurEhc16_PWXAQWekMXX2xMZ1oB34OITI 15820
poreplex/kmer_models/README.md sha256=A3-rsjSbJZ73MezpCXzBmuqunaxGOxQ8yMFr730UkTw 1747
poreplex/kmer_models/r9.4_180mv_70bps_5mer_RNA/template_median69pA.model sha256=_JeTqYg-fphzEId2hsEw5Jo4XaIVzriGtkNLnoJnGlw 66662
poreplex/kmer_models/r9.4_200mv_70bps_5mer_RNA/template_median68pA.model sha256=pMwtigW79HHJ1_ANhG-1bNWYCwuyB2cKKtGgNnGKM4o 67101
poreplex/presets/rna-r941.cfg sha256=Y0ROYJ5OwKjml6DcD5A0rhVRO67B5ca26bjx3uUtV-s 4068
poreplex/presets/MIN106-RNA001/demux-tetra-r4.hdf5 sha256=6Rxuf4YHtHAUzdc9_gX8ZECIr3h_nXVw4_HX4_xDOAE 782168
poreplex/presets/MIN106-RNA001/scaler-r3.hdf5 sha256=uch6UjQhnhAPPrldx1cHUUmeNgVllZPuUBBCZy7qW5Q 138520
poreplex-0.5.dist-info/entry_points.txt sha256=de_70orBw2zJhvYYZLRJNL9ETtjecNy2kdDtzttNne4 60
poreplex-0.5.dist-info/top_level.txt sha256=SOOa-gqG8HIoM3klJ0WfSUk-wG7c4ULy3wsLCTVbryA 9
poreplex-0.5.dist-info/WHEEL sha256=AhV6RMqZ2IDfreRJKo44QWYxYeP-0Jr0bezzBLQ1eog 109
poreplex-0.5.dist-info/METADATA sha256=6uMskIvtQL_YRufoybExNcfRm1VGhmjWEqPlQ7fXr7I 18232
poreplex-0.5.dist-info/RECORD — —

top_level.txt

poreplex

entry_points.txt

[console_scripts]
poreplex = poreplex.commandline:__main__