PyMLST

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2.1.6 PyMLST-2.1.6-py3-none-any.whl

Wheel Details

Project: PyMLST
Version: 2.1.6
Filename: PyMLST-2.1.6-py3-none-any.whl
Download: [link]
Size: 55352
MD5: addfee5307f165eefe93ea5b82e23129
SHA256: d0347f42dae250b5feaf837b5fa02112b47785cf471eb91dd6d9e0ceaa816407
Uploaded: 2024-03-20 14:43:08 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: PyMLST
Version: 2.1.6
Summary: python Mlst Local Search Tool
Author: Benoit Valot
Author-Email: benoit.valot[at]univ-fcomte.fr
Home-Page: https://github.com/bvalot/pyMLST.git
Download-Url: https://github.com/bvalot/pyMLST/archive/refs/tags/2.1.6.tar.gz
License: GPLv3
Keywords: cgMLST,MLST,bacterial genome
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Developers
Classifier: Topic :: Software Development :: Libraries
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Programming Language :: Python :: 3.7
Requires-Python: >=3.7.0
Requires-Dist: biopython (>=1.78)
Requires-Dist: click (>=7.1)
Requires-Dist: pytest (>=6.2)
Requires-Dist: sqlalchemy (<2,>=1.4)
Requires-Dist: networkx (>=2.5)
Requires-Dist: decorator (>=4.4)
Requires-Dist: requests (>=2.23)
Requires-Dist: pandas (>=1.2)
Requires-Dist: numpy (>=1.20.0)
Requires-Dist: beautifulsoup4 (>=4.9)
Requires-Dist: questionary (>=1.9)
Requires-Dist: setuptools (>=44.0)
Requires-Dist: alembic (>=1.6)
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 2777 characters]

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top_level.txt

pymlst

entry_points.txt

claMLST = pymlst.cmd:cla
pyMLST = pymlst.cmd:py
wgMLST = pymlst.cmd:wg