| Metadata-Version: |
2.1 |
| Name: |
pymodulon |
| Version: |
0.1.0 |
| Summary: |
Python package for analyzing and visualizing iModulons. |
| Author: |
Anand V. Sastry |
| Author-Email: |
avsastry[at]eng.ucsd.edu |
| Maintainer: |
Anand V. Sastry |
| Maintainer-Email: |
avsastry[at]eng.ucsd.edu |
| Home-Page: |
https://github.com/SBRG/pymodulon |
| Download-Url: |
https://pypi.org/project/pymodulon/ |
| Project-Url: |
Source, https://github.com/SBRG/pymodulon |
| Project-Url: |
Tracker, https://github.com/SBRG/pymodulon/issues/ |
| License: |
MIT |
| Keywords: |
python,iModulon,RNA-seq,transcriptomics,ICA,regulation |
| Classifier: |
Development Status :: 3 - Alpha |
| Classifier: |
Environment :: Console |
| Classifier: |
Intended Audience :: Science/Research |
| Classifier: |
License :: OSI Approved :: MIT License |
| Classifier: |
Operating System :: OS Independent |
| Classifier: |
Programming Language :: Python |
| Classifier: |
Programming Language :: Python :: 3 |
| Classifier: |
Programming Language :: Python :: 3 :: Only |
| Classifier: |
Programming Language :: Python :: 3.6 |
| Classifier: |
Programming Language :: Python :: 3.7 |
| Classifier: |
Programming Language :: Python :: 3.8 |
| Classifier: |
Topic :: Scientific/Engineering |
| Classifier: |
Topic :: Scientific/Engineering :: Bio-Informatics |
| Platform: |
GNU/Linux |
| Platform: |
Mac OS X > 10.7 |
| Platform: |
Microsoft Windows >= 7 |
| Requires-Dist: |
adjusttext (>=0.7) |
| Requires-Dist: |
beautifulsoup4 (>=4.9) |
| Requires-Dist: |
biopython (>=1.77) |
| Requires-Dist: |
graphviz (>=0.14) |
| Requires-Dist: |
jupyter (>=1.0) |
| Requires-Dist: |
lxml (>=4.6) |
| Requires-Dist: |
matplotlib (>=3.2) |
| Requires-Dist: |
matplotlib-venn (>=0.11) |
| Requires-Dist: |
numpy (>=1.19) |
| Requires-Dist: |
openpyxl (>=2.5) |
| Requires-Dist: |
pandas (>=1.0) |
| Requires-Dist: |
scikit-learn (>=0.23) |
| Requires-Dist: |
scipy (>=1.5) |
| Requires-Dist: |
seaborn (>=0.10) |
| Requires-Dist: |
statsmodels (>=0.11) |
| Requires-Dist: |
tqdm (>=4.47) |
| Requires-Dist: |
bumpversion; extra == "all" |
| Requires-Dist: |
pre-commit; extra == "all" |
| Requires-Dist: |
tox; extra == "all" |
| Requires-Dist: |
sphinx (~=3.5); extra == "all" |
| Requires-Dist: |
sphinx-autoapi (~=1.7); extra == "all" |
| Requires-Dist: |
sphinx-rtd-theme; extra == "all" |
| Requires-Dist: |
sphinxcontrib-bibtex (~=2.1); extra == "all" |
| Requires-Dist: |
nbsphinx; extra == "all" |
| Requires-Dist: |
bumpversion; extra == "dev" |
| Requires-Dist: |
pre-commit; extra == "dev" |
| Requires-Dist: |
tox; extra == "dev" |
| Requires-Dist: |
sphinx (~=3.5); extra == "docs" |
| Requires-Dist: |
sphinx-autoapi (~=1.7); extra == "docs" |
| Requires-Dist: |
sphinx-rtd-theme; extra == "docs" |
| Requires-Dist: |
sphinxcontrib-bibtex (~=2.1); extra == "docs" |
| Requires-Dist: |
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| Requires-Dist: |
pytest; extra == "tests" |
| Requires-Dist: |
pytest-cov; extra == "tests" |
| Requires-Dist: |
coverage[toml]; extra == "tests" |
| Provides-Extra: |
all |
| Provides-Extra: |
dev |
| Provides-Extra: |
docs |
| Provides-Extra: |
tests |
| Description-Content-Type: |
text/x-rst |