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ribotricer

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1.4.0 ribotricer-1.4.0-py3-none-any.whl

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Project: ribotricer
Version: 1.4.0
Filename: ribotricer-1.4.0-py3-none-any.whl
Download: [link]
Size: 57972
MD5: 96451f8771378fffa67e2c01db6ec222
SHA256: 774b3dc49fce3a68b0605473f49c04d324b4870f26c3b7d1c296cad38a155041
Uploaded: 2024-04-13 19:34:03 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: ribotricer
Version: 1.4.0
Summary: Python package to detect translating ORFs from Ribo-seq data
Author: Saket Choudhary, Wenzheng Li
Author-Email: saketkc[at]gmail.com
Maintainer: Saket Choudhary
Maintainer-Email: saketkc[at]gmail.com
Home-Page: https://github.com/smithlabcode/ribotricer
License: GPLv3
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Console
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Natural Language :: English
Classifier: Operating System :: POSIX :: Linux
Classifier: Operating System :: MacOS
Classifier: Operating System :: Microsoft :: Windows
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Utilities
Requires-Python: >=3.7
Requires-Dist: click (>=8.1.3)
Requires-Dist: click-help-colors (>=0.9.1)
Requires-Dist: matplotlib (>=3.5.3)
Requires-Dist: numpy (>=1.21.1)
Requires-Dist: pandas (>=1.3)
Requires-Dist: pyfaidx (>=0.7.1)
Requires-Dist: pysam (>=0.19.1)
Requires-Dist: quicksect (>=0.2.2)
Requires-Dist: scipy (>=1.7.0)
Requires-Dist: tqdm (>=4.64.1)
Description-Content-Type: text/markdown
License-File: LICENSE
License-File: AUTHORS
[Description omitted; length: 10760 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.43.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
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ribotricer/bam.py sha256=_2V92F1et8wEriksvPM9a1RR2_suBs2legDoFHk-1Bk 5433
ribotricer/cli.py sha256=CCUWdOFDRQX8WGlKxXBZye4el_5XwjbACle1HsHEYRA 16007
ribotricer/common.py sha256=e89Gox3VPI57kwhxLe4n9_hDNlRTtSyUOxOpBZOwUcg 3582
ribotricer/const.py sha256=yVHhSLaLPb4aT5UwDvMvch1RSoa5832JqXrBH0TlzKA 1307
ribotricer/count_orfs.py sha256=1yr7VX9Q1Je9Zm_czuFWBRozHuMzm-cYudr-ijbK6e8 9455
ribotricer/detect_orfs.py sha256=WfMYqhlK5RdpEsh9yRo-T7kpbt-9KoqLSdsv-O5KkL0 16416
ribotricer/fasta.py sha256=39N_m-2BTG0ZPFAtt5NAK5577dVHtsz20M5QUbJwZOI 4337
ribotricer/gtf.py sha256=wevcDmS-IpXjZWVzEVWX-brS7cP0DS8lBVRdtm6PHuM 4727
ribotricer/infer_protocol.py sha256=O9Q7iYaubnkQfQH8ruLX18cpE8kUi8X3hk4F-FK2uok 3912
ribotricer/interval.py sha256=7lgnRWW22VJYg88vkeRTYbp8RveeEQlabMHjDS5GV00 1323
ribotricer/learn_cutoff.py sha256=SNVSpBApMWzuev6A_QQQdPincH6RCrWyWb0AvbqFzBk 8849
ribotricer/metagene.py sha256=3DBw4CoHTG37ureojN6RuizqAHqjG34HtDBoZ1O7kgs 9757
ribotricer/orf.py sha256=Kner8rPsmNY_c5DJZg_ODYquKZXFNmmFG4OWBeP35iI 5750
ribotricer/orf_seq.py sha256=wobQqwNMk_q94_aK8Zcb52bvD2jhyofvbY3dLNUvgWk 4269
ribotricer/plotting.py sha256=kOw69HEyLP8jmL8yz0T314PMcznlpQBfkMtX1zb7XFI 4546
ribotricer/prepare_orfs.py sha256=9RE-TZRPLfXQECJQ3-3FpK6SjKE9rwPzynCKEQji580 12127
ribotricer/statistics.py sha256=QNERlEpYj1I6xvpDAtXE-kIeWahHx6lYD18OQA2wUaY 3294
ribotricer/utils.py sha256=agAKzq_PEZl2N94SmLJ-NihR4u0YRAnZIyO7LT0jH2E 14482
ribotricer-1.4.0.dist-info/AUTHORS sha256=dYBQgGK0jNO7mChXH3Y204CD_DqgZ7dnreI4Bzt7Pr8 68
ribotricer-1.4.0.dist-info/LICENSE sha256=SbEloPkMoy_JyRmhVINmYUARR1Ti6X6vbmdokZLOlHM 35211
ribotricer-1.4.0.dist-info/METADATA sha256=EuFA3bpA65UgwB9TUsb5QPH_tuGRSA2hGBJKkxBH2ko 12250
ribotricer-1.4.0.dist-info/WHEEL sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ 92
ribotricer-1.4.0.dist-info/entry_points.txt sha256=xUo2yksnPj71GlnxkbDHZEr9-bjoY4XseRvJP-r2UtU 50
ribotricer-1.4.0.dist-info/top_level.txt sha256=kRMUih-EVqC7agw4l453CNP8QGbfsYNzpOxjUx_5IQo 11
ribotricer-1.4.0.dist-info/RECORD — —

top_level.txt

ribotricer

entry_points.txt

[console_scripts]
ribotricer = ribotricer.cli:cli