rnaglib

View on PyPIReverse Dependencies (0)

2.0.12 rnaglib-2.0.12-py3-none-any.whl

Wheel Details

Project: rnaglib
Version: 2.0.12
Filename: rnaglib-2.0.12-py3-none-any.whl
Download: [link]
Size: 138570
MD5: f7ac829d245698411e40b24a638418f7
SHA256: f3bc61564d45b4f82a7ae808a9fc3cb0f1e7e07286a5079d16241ed7d658c39b
Uploaded: 2024-01-31 06:22:12 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: rnaglib
Version: 2.0.12
Summary: RNAglib: Tools for learning on the structure of RNA using 2.5D geometric representations
Author-Email: Vincent Mallet <vincentx15[at]gmail.com>, Carlos Oliver <oliver[at]biochem.mpg.de>, Jonathan Broadbent <jonathan.broadbent[at]mail.utoronto.ca>, "William L. Hamilton" <wlh[at]cs.mcgill.ca>, Jérome Waldispuhl <jeromew[at]cs.mcgill.ca>
Project-Url: Documentation, https://rnaglib.readthedocs.io/en/latest/index.html
Project-Url: GitHub, https://github.com/cgoliver/rnaglib
License: MIT License
Keywords: RNA,3D,graph neural network
Requires-Python: >=3.7
Requires-Dist: joblib
Requires-Dist: requests
Requires-Dist: torch
Requires-Dist: networkx
Requires-Dist: numpy
Requires-Dist: seaborn
Requires-Dist: scikit-learn
Requires-Dist: tqdm
Requires-Dist: biopython
Requires-Dist: loguru
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 3270 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.42.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
rnaglib/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
rnaglib/bin/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
rnaglib/bin/rnaglib_download.py sha256=5E_T_T232tnQ4VQfW8JQKh54dYsjkR_FkF9U_faeyek 1678
rnaglib/bin/rnaglib_prepare_data.py sha256=audhfVv3Rg7DXDHPKQf2-opGtSf3wIj6JAADlNrmjIU 94
rnaglib/bin/rnaglib_tokenize.py sha256=QQVmSzbvt9QmiaG-l4XsJ07nct4IkRF4IZ1C5KqE1uk 1337
rnaglib/config/__init__.py sha256=yQzDS_MiexlVOaT7c_5Y2oKSq4VZ7uGH336PrEqrxIQ 141
rnaglib/config/build_iso_mat.py sha256=WnmYGQkaednhOMVGRGB2TMhzTrTMn57cLPgmJVVISmw 3865
rnaglib/config/graph_keys.py sha256=U6FlsM5o4FsCgI7nJryp1jq6cQri5XL0BWGgDKS7IfE 2413
rnaglib/config/ligands.py sha256=wk2KaLUpmQb76FxKcerpW4VQWHYIP-a5gfEtAwfZA9I 335
rnaglib/config/rna_smiles.txt sha256=hqWvJmpQMq8CCf4qrfe_xjO_5NwZLZdM-OltbKj2l8w 48536
rnaglib/data_loading/__init__.py sha256=7k1hdiLs_P8azl7LpheoN_ks3jy7umE7BsiSRitXMAc 363
rnaglib/data_loading/feature_maps.py sha256=czqw3lO7E0Xhpvxdfo-Z-GAn5ODl__B-LV8_gpAmyUA 11571
rnaglib/data_loading/get_statistics.py sha256=MVt7dWg9GzBplGdWZT-73sAWHIZImYfOKbermTNERPw 8749
rnaglib/data_loading/graph_index_NR.json sha256=rQSJFshrIqvfKCV8_Dmg5dS0EOJFqzZEruMdHAlS-VY 82432
rnaglib/data_loading/rna_dataset.py sha256=T62BO-BZjDUaE-hKjTGYvhtNi_rkBMf7FhcdCii_poE 7465
rnaglib/data_loading/rna_loader.py sha256=_sXmayfu9dVebuaOJ7ttk09QT-k7hpM8qZOhexhQ4Gc 12602
rnaglib/data_loading/splitting.py sha256=n45O_9qktsjZMKiuzGMcWgU6Ctbq1JMetTub_HvAODA 6269
rnaglib/data_loading/test.py sha256=7G6IujJNsQ271Ea-LlZ8_8wgadzoaWhfaSNFhSMu6NE 2827
rnaglib/drawing/__init__.py sha256=A8W6l_q04cEyQSKz8tI5wXTjwZd1RqHGUn8uO0uhtn8 103
rnaglib/drawing/rna_draw.py sha256=zONFTheU1WRYOc_tCrsNmKuyvlU93b7jqfWcEF-YSN8 9084
rnaglib/drawing/rna_layout.py sha256=7Ej5OBbRsgf-Gw7C_ct6JZvcO6jMWqWMiaJR8I2pOiI 3690
rnaglib/examples/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
rnaglib/examples/rnaglib_first.py sha256=l-TIs15WePuLOTsLTxHH0BpvPRTRt86SM3noqrDDGwI 1544
rnaglib/examples/third_example.py sha256=CnJQl_wdlsiws4mDN4xU5AT83a0t-HXLNb-35duaoBQ 1680
rnaglib/ged/__init__.py sha256=WBJ-Rt-xpU77ZGfdW_ONR2I6ne2XLsrX4WFbwB8bEfQ 139
rnaglib/ged/ged_nx.py sha256=_4w37KEFVwc45Fw5ELfTJUUGObVks4aDeUNFzUubgGY 49688
rnaglib/ged/rna_ged_nx.py sha256=hQmAmPn4quNT0CAmy-47YWfMpWC0sxZFGYbAmU_vPik 3443
rnaglib/kernels/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
rnaglib/kernels/node_sim.py sha256=MokntCuRDFno66IwLSuxh5UHe_y9aCFv7EEqxInYgVo 28467
rnaglib/learning/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
rnaglib/learning/learn.py sha256=LaMavt6IPzR0NqTYUeedGWacX5HsQdqhJq0Mot_r1O0 12614
rnaglib/learning/learning_utils.py sha256=IfMr2ESi4OxRL4RfKmF8iRYvLR6vy71CXVSL6nubZAI 13431
rnaglib/learning/models.py sha256=WoayjeQSDexY1ZjsbyzACbN3YgXqczxbTM72UiGV7aA 10569
rnaglib/prepare_data/__init__.py sha256=85RnyoSDBnn62x1-i_v_jpfWdPeFIisYIz9RqtLHonQ 674
rnaglib/prepare_data/annotations.py sha256=EGIyc0ihvSJPsNnItthFYIo36xPPu_x5wNRxHj2RLRg 8139
rnaglib/prepare_data/chopper.py sha256=TvsAbcviS436f00H5AAOoAc4dddT5SslThPniU0KzB4 4942
rnaglib/prepare_data/describe_datasets.py sha256=dqCsyRL0S7eQnGCnI1W3F4p3YiCM53MRoWmZrdoZbhY 1838
rnaglib/prepare_data/dssr_2_graphs.py sha256=a3lJrpZjb1HHgN1TRBXqWScUwAjZ-Y3LfbeJunc1OMg 10645
rnaglib/prepare_data/filters.py sha256=MyyM6gDI1c2F6vPvCgPYgUO8XjOOYouqhtqSRNkA5G0 3635
rnaglib/prepare_data/fr3d_2_graphs.py sha256=FxZhI3Ykb4UgYtiVsIce55wn3xFmvll2-u40ilujVfQ 5086
rnaglib/prepare_data/hash_check.py sha256=avHYzKFuhvlj16x5uof5NhapV3ItiF_m1MQTJtTTidA 919
rnaglib/prepare_data/khop_annotate.py sha256=opSiJv3ZZ178k3t_0RYrmGPeqSfL5-CiW7aSPowh9w0 8587
rnaglib/prepare_data/main.py sha256=asP-6iopkFZ6csXULaxkFfbnSR9Ja1bramB6YTlY2v0 6083
rnaglib/prepare_data/retrieve_structures.py sha256=RZO9Nrq5NUY_gKYa8Y-CMNys05JVuFFodDMfC8H4Z7A 1854
rnaglib/prepare_data/test.py sha256=XZyaAqBcYObt6puvo6ANqrgKXjVpL2l7UEgzQlTRfl0 200
rnaglib/representations/__init__.py sha256=BtlL_zXnRqNYrBziIqMoZbTFS3MlaPcPEDZ0vAFDKlw 411
rnaglib/representations/graph.py sha256=zF-DT46kjOSC-e7TpJUaBkeyHYgrhTEap4Yy2p66ahE 3639
rnaglib/representations/point_cloud.py sha256=K4-nGj5zZMu0yDoI0271Y7hIz6VOEaNO-AP7J7asRqk 2643
rnaglib/representations/representation.py sha256=DXhknIQDXm5admmQAAYiI4-_5HW0z1EFD0CVEUTN1IY 870
rnaglib/representations/rings.py sha256=h74VlhGzdNeQs9ur2Osa-FyTNAW5foUduURLK2ZT86c 2271
rnaglib/representations/voxel.py sha256=SvS_MQBi3k2epDH7NewLsx1wL0Gc06vYDaxmZQoEIZU 6556
rnaglib/utils/__init__.py sha256=uuXlzBDgUByPK_rZN7KfKUctw41TuMKar67Py-nzgfw 1521
rnaglib/utils/feature_maps.py sha256=czqw3lO7E0Xhpvxdfo-Z-GAn5ODl__B-LV8_gpAmyUA 11571
rnaglib/utils/graph_io.py sha256=oE34SoTtB7i-X5RTvyDguEw-tiB1h1yaTKvslG5mAB4 16304
rnaglib/utils/graph_utils.py sha256=yZ87fK53NzOa8VJBiS5LYgZAbvYQonJk7x7uPmo-F_U 20450
rnaglib/utils/graphlet_hash.py sha256=WmKSrg8lO7i8yIDlxo7mIESyp4e4-BRWulMvgVnZmW0 10751
rnaglib/utils/misc.py sha256=xQC6S19ptqtABJp5NvqZ1RBn3vbGD3RK4cy6qwqTuRE 797
rnaglib-2.0.12.dist-info/LICENSE sha256=LHmwG7ggLihUi4p8scpi6Z7rCxFugQqJjAo4tXTvTp0 1493
rnaglib-2.0.12.dist-info/METADATA sha256=bGOYhORsHaCvMu3wjt5Qutsl20nCPJ0fbfk_20AL4Ws 4168
rnaglib-2.0.12.dist-info/WHEEL sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM 92
rnaglib-2.0.12.dist-info/entry_points.txt sha256=uob0b4aoONfPmRovCZH9PAwGXKx3XaHc42Hco6pYRVc 343
rnaglib-2.0.12.dist-info/top_level.txt sha256=n9ZBT15BW5s8IRTudRYWhIlWD32MCrr1moCqng7BbRs 8
rnaglib-2.0.12.dist-info/RECORD

top_level.txt

rnaglib

entry_points.txt

rnaglib_download = rnaglib.bin.rnaglib_download:main
rnaglib_first = rnaglib.examples.rnaglib_first:main
rnaglib_prepare_data = rnaglib.bin.rnaglib_prepare_data:main
rnaglib_second = rnaglib.examples.rnaglib_second:main
rnaglib_third = rnaglib.examples.third_example:main
rnaglib_tokenize = rnaglib.bin.rnaglib_tokenize:main