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SIRVsuite

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0.1.2 SIRVsuite-0.1.2-py3-none-any.whl

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Project: SIRVsuite
Version: 0.1.2
Filename: SIRVsuite-0.1.2-py3-none-any.whl
Download: [link]
Size: 164916
MD5: 847ee4c97a4ffe6e4b6d71d4a4af80e2
SHA256: 320d5e2085bbf6f706ad03e6204afe888c0a218cdb944d82c18f8b3887cacf96
Uploaded: 2022-01-13 11:35:09 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: SIRVsuite
Version: 0.1.2
Summary: SIRVsuite - a command line tool to QC an RNA-Seq workflow using Lexogen's SIRV spike-in controls
Author: Tomas Drozd, Andreas Tuerk
Author-Email: tomas.drozd[at]lexogen.com, andreas.tuerk[at]lexogen.com
Home-Page: https://github.com/TomasDrozd/SIRVsuite
Project-Url: Documentation, https://github.com/Lexogen-Tools/SIRVsuite/blob/master/README.md
Keywords: SIRVsuite
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: License :: Other/Proprietary License
Requires-Python: >=3.6
Requires-Dist: cycler (==0.10.0)
Requires-Dist: gtfparse (==1.2.1)
Requires-Dist: kiwisolver (==1.2.0)
Requires-Dist: matplotlib (==3.3.1)
Requires-Dist: numpy (==1.19.2)
Requires-Dist: pandas (==1.1.3)
Requires-Dist: pyBigWig (==0.3.18)
Requires-Dist: pycairo (==1.20.0)
Requires-Dist: pyparsing (==2.4.7)
Requires-Dist: pysam (==0.16.0.1)
Requires-Dist: python-dateutil (==2.8.1)
Requires-Dist: pytz (==2020.1)
Requires-Dist: scipy (==1.5.2)
Requires-Dist: six (==1.15.0)
Description-Content-Type: text/markdown
[Description omitted; length: 734 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.37.1)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
SIRVsuite/SIRVsuite.py sha256=gl7luZbycFURA7vCooo1JnmOVVpxk8MWZST5f4Igse0 4609
SIRVsuite/__init__.py sha256=9OqyLI8BJJq7HuYwj3jLjJ8THNFjRlh3YfYjfJRL4uY 224
SIRVsuite/__main__.py sha256=szbeCoxdkcdXgEefkX4988HsMpSXa8XT0JH9eMxhBXU 168
SIRVsuite/_version.py sha256=nJw07NaAOarsjNXV62uCKxBueTVXsMnv45wa1HFr3pM 142
SIRVsuite/Pipeline/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
SIRVsuite/Pipeline/countReader.py sha256=wmUNAnBkBPqrWmOmfJ7ALqSnI43AsJLbFjswxA9oKJs 5898
SIRVsuite/Pipeline/helper.py sha256=q9RQIpiWOioFFo7RpOhlM4TS186oaaOo4ENsA0n_P7M 8725
SIRVsuite/Pipeline/Concentration/SIRV_concentration.py sha256=LHvJDaJ5IECelnO6FYx_ugmahj3aPh8f4COZiJ9vz0Y 11659
SIRVsuite/Pipeline/Concentration/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
SIRVsuite/Pipeline/Correlation/ERCC_correlation.py sha256=o8ZYXKKV6ARfSWtqImeT2fmHHhpXedpGY_DRUGaFVSk 3971
SIRVsuite/Pipeline/Correlation/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
SIRVsuite/Pipeline/Coverage/SIRVset_coverage.py sha256=rd0kgplkKaiZEHRYB4wZmhJa_pb0PADgkZS-DeFgQoQ 35161
SIRVsuite/Pipeline/Coverage/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
SIRVsuite/Pipeline/Coverage/cairoDrawer.py sha256=TY6rBCCd_bOy97rh8ekCC-z5mqCAwy1Ao9cpQMOQcFg 16018
SIRVsuite/Resources/ERCC92_Concentration.tsv sha256=jTBPT5ou5OVahRKly7udSVun-uGqfOsrvyECkuNisK4 3005
SIRVsuite/Resources/SIRV_isoforms_multi-fasta-annotation_190418a.gtf sha256=I1C0cKqWJIh6--wS7c0p0_bsJHVvdUW6fArxM6CaAlk 51691
SIRVsuite/Resources/SIRV_isoforms_multi-fasta_190418a.fasta sha256=xjzqyeooKC6-lsWmJdm3V6mgXrocrd-rouRXObRodaY 431520
SIRVsuite/Resources/SIRV_isoforms_multi-fasta_190418a.fasta.fai sha256=VGopAij-1RYZGLndNMIdpAg41TzH5ltFriJEFo2Jl80 3267
SIRVsuite/Resources/igv_session.xml sha256=IGCw9iWoATppYL9njAUpPMerKyAAGUiyyua7uAnFXaM 1170
SIRVsuite-0.1.2.dist-info/AUTHORS.rst sha256=IkhFQGAISoqSQ57VLW2bOCZQXwCvZEwDFGh7bpw2aXg 160
SIRVsuite-0.1.2.dist-info/LICENCE sha256=9PNkf1yBEhDQgQnRpIHRKHSYUa6W9szwFS1klKMUwU8 2257
SIRVsuite-0.1.2.dist-info/METADATA sha256=a0Z81S0LIhLLuWx4ilUB5PHn1Cdj4DNBmTog-UNI-_8 2126
SIRVsuite-0.1.2.dist-info/WHEEL sha256=G16H4A3IeoQmnOrYV4ueZGKSjhipXx8zc8nu9FGlvMA 92
SIRVsuite-0.1.2.dist-info/entry_points.txt sha256=FFSdAFpcSWqjlr0NH0waVxOVUryXCYRorYb27sn4Jwo 55
SIRVsuite-0.1.2.dist-info/top_level.txt sha256=Rvyn71BQNj2cg9UZZr3xdx4sPyl9uq0WR0PTTGRYol0 10
SIRVsuite-0.1.2.dist-info/RECORD — —

top_level.txt

SIRVsuite

entry_points.txt

[console_scripts]
SIRVsuite = SIRVsuite.__main__:main