Wheelodex » Projects » STFD

STFD

View on PyPI — Reverse Dependencies (0)

0.0.1 STFD-0.0.1-py3-none-any.whl

Wheel Details

Project: STFD
Version: 0.0.1
Filename: STFD-0.0.1-py3-none-any.whl
Download: [link]
Size: 60102
MD5: 7cf748681691cadf0c4adb63a25fdccf
SHA256: 2c0883a647f877d4357351af9b79d3b974983f96a653b422d7b138a0736a888f
Uploaded: 2024-03-22 03:30:21 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · dependency_links.txt

METADATA

Metadata-Version: 2.1
Name: STFD
Version: 0.0.1
Summary: STFD: Series of deep learning-based foundation models for spatial transcriptomic data analysis
Author: Ziwei Xue
Author-Email: ziwei.21[at]intl.zju.edu.cn
Home-Page: https://github.com/
Requires-Python: >=3.9
Requires-Dist: scatlasvae
Requires-Dist: labw-utils (==1.0.3)
Requires-Dist: numba (==0.57.1)
Requires-Dist: numpy (==1.21.6)
Requires-Dist: pandas (==1.4.2)
Requires-Dist: omegaconf (==2.3.0)
Requires-Dist: pytorch-lightning (==2.2.0.post0)
Requires-Dist: scikit-image (==0.20.0)
Requires-Dist: opencv-python (==4.9.0)
Requires-Dist: transformers (==4.17.0)
Requires-Dist: datasets (==2.1.0)
Requires-Dist: anndata (==0.8.0)
Requires-Dist: scanpy (==1.8.1)
Requires-Dist: scikit-learn (==0.24.1)
Requires-Dist: matplotlib (==3.3.4)
Requires-Dist: einops (==0.4.1)
Requires-Dist: biopython (==1.79)
Requires-Dist: seaborn (==0.12.2)
Requires-Dist: sinfonia (==0.0.3)
Requires-Dist: tabulate (==0.9.0)
Requires-Dist: logomaker
Requires-Dist: ema-pytorch
Requires-Dist: pytorch-fid
Requires-Dist: accelerate
Requires-Dist: faiss-cpu (==1.7.2); extra == "cpu"
Requires-Dist: torch (==1.13.1); extra == "cpu"
Requires-Dist: torchvision (==0.14.1); extra == "cpu"
Requires-Dist: torchaudio (==0.13.1); extra == "cpu"
Requires-Dist: sphinx (==3.2.1); extra == "docs"
Requires-Dist: nbsphinx (==0.8.7); extra == "docs"
Requires-Dist: sphinx-rtd-theme (==1.2.0); extra == "docs"
Requires-Dist: sphinx-hoverxref (==1.3.0); extra == "docs"
Requires-Dist: faiss-gpu (==1.7.2); extra == "gpu"
Requires-Dist: torch (==1.13.1+cu117); extra == "gpu"
Requires-Dist: torchvision (==0.14.1+cu117); extra == "gpu"
Requires-Dist: torchaudio (==0.13.1+cu117); extra == "gpu"
Provides-Extra: cpu
Provides-Extra: docs
Provides-Extra: gpu
Description-Content-Type: text/markdown
[Description omitted; length: 316 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.41.3)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
stfd/__init__.py sha256=54GRfhuIdQIaa1PjEfNSPbpsIrsxdGmNmcw6h4de8EQ 982
stfd/_compat.py sha256=AtIzyLtmoTLz4sEpKdaJPT0UBv3V8YFtr30eam2GfTk 936
stfd/_metadata.py sha256=YKuaQknWHvdKviwVf3XcxuIX9xEV7raH_hMSxTXpyKg 1420
stfd/_version.py sha256=9VhSGV5ZyHfm_vUuUbVSBg_WEobb2WyqcGP5JyQEU-I 17
stfd/data/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
stfd/model/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
stfd/model/_model_builder.py sha256=TiVNJjVB_b6iE2AI5VgWavrhTFGoGBHUYO5yFGI31ig 238
stfd/model/_model_utils.py sha256=nYCIegNyo60QWDlpjkHatpCr7LaYlw9DM3YrK7qesTs 5153
stfd/model/_primitives.py sha256=t9S3GD7ACNfJIP3BpGjdi5ub9QV1GC0ozh8y6LQJULo 29126
stfd/model/_spatial_gene_sets.py sha256=421JqO4KSUZD23knxGQsgS0m8myvzAc5Syr4Dnod_wg 5887
stfd/model/_spatial_ldm.py sha256=c6D6FKol8WWg_fz0uLD1atap42jcnkxM3Zb_TvWCQ20 14498
stfd/model/_spatial_model.py sha256=FmAyhc98N1JD0EBWq0Gm1X8FNMly5lLAM6wBvp2KlHQ 165410
stfd/model/_spatial_modeling_utils.py sha256=HweOPgpBM7HOv2HmtgnuCc5xRG3KmZD1MAeIrT8cD7E 15366
stfd/plotting/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
stfd/plotting/_palettes.py sha256=2HOvd-Fztqm7eGQktdiDviDqk-Z7CFz_EmHFUTscrg0 1286
stfd/plotting/_spatial_plot.py sha256=uLnDxFURDuVwSGZveUexwE5BX6hdFU5mWDUu1eMt9X8 3520
stfd/tool/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
stfd/utils/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
stfd/utils/_compat.py sha256=5c7_RZ7UzkCS5nTQHFNUoAWVgNqCBmJqtdh8By57KVo 439
stfd/utils/_decorators.py sha256=Hob8PUHJmyYwX4yQlSm0wrqPMG4Jb-SkpiiuFfxLKFc 2663
stfd/utils/_logger.py sha256=qS7jLaSnPZV4M6dQHiF17E3Ifm4FxvKRT4HPWbDO1pc 4779
stfd/utils/_utilities.py sha256=5jE0Hc0RRWuYssWD-3DRe8u6tle2BNC7P4pThahI1_c 10224
STFD-0.0.1.dist-info/METADATA sha256=xQmA43-XgFdWYB09daYuzot2UYgL7L02Qo9T3w9K7ww 2120
STFD-0.0.1.dist-info/WHEEL sha256=Xo9-1PvkuimrydujYJAjF7pCkriuXBpUPEjma1nZyJ0 92
STFD-0.0.1.dist-info/dependency_links.txt sha256=N7BbZK65mTBNXmLSTRsg3VVjB-jl2mBpDU0FEXhYAtw 43
STFD-0.0.1.dist-info/top_level.txt sha256=btm92Lf1JyXpdxTSADot8IihxMU6eykQQnwT9Tkysoc 5
STFD-0.0.1.dist-info/RECORD — —

top_level.txt

stfd
['https://download.pytorch.org/whl/cu117']