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strainge

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1.3.9 strainge-1.3.9-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
strainge-1.3.9-cp39-cp39-macosx_10_9_x86_64.whl
strainge-1.3.9-cp39-cp39-musllinux_1_1_x86_64.whl
strainge-1.3.9-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
strainge-1.3.9-cp38-cp38-macosx_10_9_x86_64.whl
strainge-1.3.9-cp38-cp38-musllinux_1_1_x86_64.whl
strainge-1.3.9-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
strainge-1.3.9-cp312-cp312-macosx_10_9_x86_64.whl
strainge-1.3.9-cp312-cp312-musllinux_1_1_x86_64.whl
strainge-1.3.9-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
strainge-1.3.9-cp311-cp311-macosx_10_9_x86_64.whl
strainge-1.3.9-cp311-cp311-musllinux_1_1_x86_64.whl
strainge-1.3.9-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
strainge-1.3.9-cp310-cp310-macosx_10_9_x86_64.whl
strainge-1.3.9-cp310-cp310-musllinux_1_1_x86_64.whl

Wheel Details

Project: strainge
Version: 1.3.9
Filename: strainge-1.3.9-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Download: [link]
Size: 1995378
MD5: 9dd1411b878663a6969571a451d1e41e
SHA256: 2696b7b0a069f043c14752dd3b24fdbcb3eb68214feebfd7a12bd3ce1b07c6de
Uploaded: 2023-11-01 15:38:37 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: strainge
Version: 1.3.9
Summary: Strain Genome Explorer: a tool suite for tracking and characterizing low-abundance strains.
Author: Bruce Walker, Tim Straub, Lucas van Dijk
Author-Email: bruce[at]broadinstitute.org, tstraub[at]broadinstitute.org, lvandijk[at]broadinstitute.org
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Classifier: Environment :: Console
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.8
Requires-Dist: numpy
Requires-Dist: scipy
Requires-Dist: h5py
Requires-Dist: intervaltree
Requires-Dist: matplotlib
Requires-Dist: scikit-bio (>=0.5.8)
Requires-Dist: scikit-learn (>=0.24)
Requires-Dist: pysam
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 2275 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.41.3)
Root-Is-Purelib: false
Tag: cp39-cp39-manylinux_2_17_x86_64
Tag: cp39-cp39-manylinux2014_x86_64

RECORD

Path Digest Size
strainge-1.3.9.dist-info/entry_points.txt sha256=VQGCLj4DXmS8qsmwrg3GMOyP1r8lZ-ewrSHB1o99TUM 146
strainge-1.3.9.dist-info/LICENSE sha256=iLp8-yQSXkUHOwyzG6udO_WTXmln6zxYv6tTFUwHMow 1502
strainge-1.3.9.dist-info/WHEEL sha256=nIxR5vuQPQ6CvC3h-1pWWXVV6Ku-TITLSJjpV-6iFqM 148
strainge-1.3.9.dist-info/METADATA sha256=8j1l8v64D9xU_FO3yiVLSN3ieWaltbhuRHtK5QhTus0 3113
strainge-1.3.9.dist-info/RECORD — —
strainge-1.3.9.dist-info/top_level.txt sha256=yDk2t6axR0Nveyxmez2PO3XhatwCJP9nTFxXimhhiD0 9
strainge-1.3.9.data/scripts/pankmer sha256=LBTMZucVrOFoNNNEGwj65rTJmWgdBrErum7wzz4ZYaA 2960
strainge-1.3.9.data/scripts/refseq-extract sha256=NMkeb9RtRQDlIaubBjQgsXPVdkaq-4OikDnHEAS7Y54 4509
strainge-1.3.9.data/scripts/kmerseq sha256=YKkj3hgXI83u2gif1lPz1F-baCbi0Kvm6mSRgjnT28U 4798
strainge-1.3.9.data/scripts/refseq-download sha256=HUc1mUSWDXhvWpEKyhXaRxDbvsv8OpQ6BZYLuCcgEaA 5023
strainge-1.3.9.data/scripts/kmercoverage sha256=zxoGPETvlFvlNH-WadB6c5eZTwzVVE912meqeFq5GP8 4064
strainge-1.3.9.data/scripts/kmertree sha256=MQi3ggMalSm3RaGxFMsvXfCHg8ZdkWMMtwRElh-L7pc 15078
strainge-1.3.9.data/scripts/kmersimilarity sha256=WpXrcVV-GP3P1cTQtuo2_RY4RJYWH6P_-A6egZhep_4 6649
strainge-1.3.9.data/scripts/kmerspectrum sha256=Xox_KIhKJ4PSbldcrqIf2xFwcqEZgftW_KEvPhysajw 3950
strainge-1.3.9.data/scripts/treepath sha256=uLgjI3y1K7sTj16Snv7jyuA8nnOCk9PoApPd1GYk1mw 32374
strainge/search_tool.py sha256=XMeqKcVVG2Tss4zPrcKXdCIG40xyup6CdJuor1gdDkM 17400
strainge/sample_compare.py sha256=i73mkIE3FSqhqkKgUVt9c7QP5MUCU_knv0-s_6zvp7s 10262
strainge/variant_caller.py sha256=9hdf0HrCkqPLGCcYHNXdpAnmQ513ekF87DBrjYMWiOQ 40669
strainge/kmerizer.cpython-39-x86_64-linux-gnu.so sha256=ZgbIK10SJX58lk0NegijIRSRUchegkIOgZyE0lfjwhc 7319696
strainge/__init__.py sha256=gIVwiSv8qgHvID59qGRW4CKiW1620B8JaacseHDF4rM 1896
strainge/_version.py sha256=RjHbNMUWaGnVk3XqqRIDGNxD237x28s49GdbA_jBtlc 497
strainge/kmertools.py sha256=n5zw9C9pm2MHe3TnpRTkQj77MFOzkvgBJeMJUy9NIXQ 20003
strainge/cluster.py sha256=WeI_JQ0ZUOrgJKb8u3J29m2hSClpDzZtwLHC9XiDC78 5717
strainge/comparison.py sha256=vI_hd_A0lf1dpL-xkSE7qpuEQR5JnI3W8KT23XqA_MI 3851
strainge/utils.py sha256=oSlLs_tIltMPzLQhSs6iTu0FZmP_Cbfq51LOdSwzZgk 4256
strainge/io/comparisons.py sha256=cCC_IiE9191yqgWUKY7M49XKmHHCLKzv2rWfx28izW0 4813
strainge/io/__init__.py sha256=eZq5n-a1WDtE2NoepFqQtcxjzuWlEB0LTFQgCIU9zPk 1576
strainge/io/variants.py sha256=6Win6GWRVSCmg4VI8E0MB5zqRBRa42Ddt1OYQ6k6bhE 17581
strainge/io/utils.py sha256=1Ox9EdVGRN1vEMSEo9feqgrhqI5aXAAdul3foI7DqlI 4723
strainge/cli/kmersets.py sha256=u4aCxXYez1sdFgPD2CoD7EMUmOSlDmrTPKzXWp4PWQ4 23902
strainge/cli/registry.py sha256=iqd8-1pWdSVFH_ne_c3tDMlBmd7pfqi_YCjADU-Wlpc 3726
strainge/cli/__init__.py sha256=U9VeM-_okF4q7i8so7FAzMZyB8gCtdv4kIBWpT5UJK0 1575
strainge/cli/straingr.py sha256=sli83igpT4ZovMQ95j4NivF07zfS586flxrgbRSQreI 39098
strainge/cli/straingst.py sha256=n-hLcEVQpzekchw6kiZ4MmjSNb377-zjhELsGR7p--M 8846
strainge/cli/main.py sha256=r9VGxoRLwiHprPz4ddRswtqD5QukxKGvA-TGUbvSN6w 6455

top_level.txt

strainge

entry_points.txt

[console_scripts]
strainge = strainge.cli.main:strainge_cli
straingr = strainge.cli.main:straingr_cli
straingst = strainge.cli.main:straingst_cli