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the-real-genotools

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1.2.2 the_real_genotools-1.2.2-py3-none-any.whl

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Project: the-real-genotools
Version: 1.2.2
Filename: the_real_genotools-1.2.2-py3-none-any.whl
Download: [link]
Size: 1059075
MD5: 754f2140333ae8ff5ead59d8d25e6b89
SHA256: 8846a275cdf4b4778e03dbdda01d9baedb14e2b022dae01f2b5604977f3086ef
Uploaded: 2024-04-12 23:13:40 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: the-real-genotools
Version: 1.2.2
Summary: A collection of tools for genotype quality control and analysis
Author: Dan Vitale
Author-Email: d.vitale199[at]gmail.com
Home-Page: https://github.com/dvitale199/GenoTools
License: Apache License 2.0
Classifier: Programming Language :: Python :: 3
Classifier: Operating System :: OS Independent
Requires-Python: >=3.8
Requires-Dist: dash-bio (>=1.0.2)
Requires-Dist: joblib (>=1.3.0)
Requires-Dist: matplotlib (>=3.6.2)
Requires-Dist: numba (>=0.57.1)
Requires-Dist: numpy (>=1.23.5)
Requires-Dist: pandas (>=2.0.3)
Requires-Dist: Pillow (>=9.3.0)
Requires-Dist: plotly (>=5.11.0)
Requires-Dist: requests (>=2.28.1)
Requires-Dist: scikit-learn (>=1.3.0)
Requires-Dist: scipy (>=1.9.3)
Requires-Dist: seaborn (>=0.12.1)
Requires-Dist: setuptools (>=65.6.3)
Requires-Dist: statsmodels (>=0.13.5)
Requires-Dist: streamlit (>=1.15.2)
Requires-Dist: umap-learn (==0.5.3)
Requires-Dist: xgboost (>=1.7.6)
Requires-Dist: google-cloud-aiplatform
Requires-Dist: google-cloud-storage
Requires-Dist: pytest (>=3.7); extra == "dev"
Requires-Dist: twine (>=1.11.0); extra == "dev"
Provides-Extra: dev
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 4176 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.40.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
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genotools/__main__.py sha256=1TCOn1OaE2c-wD0DIujAFcleRPsbVy9PqsYuWa6BWFQ 10963
genotools/ancestry.py sha256=YdlkhdS-Re6OheFtI4ikP1djnzlauTeH1mlK4y2yasM 48333
genotools/dependencies.py sha256=w-syzOZBIpUXqKqKw_-idd1ypB0MqOV64ImZ5E6JA2I 6729
genotools/download_refs.py sha256=5oFFAnzKmzCtKvp6fyDazGx1-W5l0BR-8FlEubraKFU 5275
genotools/gwas.py sha256=Wnq3hSpMO2IxzS8QazOV3BTEawhcEEkj8WBbFeTJy_E 13077
genotools/imputation.py sha256=UwweQGnjSFy76o9Fk-AFHxuLcZBU5M5RqxT3P4Rw8Eg 6909
genotools/pipeline.py sha256=hbuS-olk1OQiSC_-rMlquWxidwDJk9T827s_yzIR03Q 14765
genotools/qc.py sha256=HEAdDhIYhMXn4WVmptvjy86WjKJGmv7eZ0MnD2aaSVY 45404
genotools/utils.py sha256=Zb498xVzsORCPAhvq9mtuL1D5wIA3GgslyTsevleAPs 22822
genotools/container/Dockerfile sha256=VkhrSsiHy6j8hiZaq6-5ROejc1LipL3VC3G7QpRX_Q4 266
genotools/container/GP2_merge_APRIL_2023_ready_genotools_callrate_sex_ancestry_umap_linearsvc_ancestry_model.pkl sha256=ZOz7PdT2na5t0pQIaSB7tNFtbq7S1p1glxAJOc-c7S4 1169711
genotools/container/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
genotools/container/requirements.txt sha256=93-tdqg0CkQW6FIzx_fpHeyftHzJ2Sz9aoj6d6fW838 141
genotools/container/run.py sha256=Ew-Ny6F6Kxsu0lsBcFbedx650dlyXC9-Vcijhagfzig 1600
the_real_genotools-1.2.2.dist-info/LICENSE sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ 11357
the_real_genotools-1.2.2.dist-info/METADATA sha256=_pdrWsN7P0-2OkwieTlZqJdPUavv2NlyVQ3UICXObww 5398
the_real_genotools-1.2.2.dist-info/WHEEL sha256=pkctZYzUS4AYVn6dJ-7367OJZivF2e8RA9b_ZBjif18 92
the_real_genotools-1.2.2.dist-info/entry_points.txt sha256=4Wfzv1m0hFkkmBjux1S2R9FFVsoWSwb7Se0Yzfx9eRo 122
the_real_genotools-1.2.2.dist-info/top_level.txt sha256=1ZRpBh3ubpNBQoNFQEqkHSWKouG045rWn7NVkSIoopo 10
the_real_genotools-1.2.2.dist-info/RECORD — —

top_level.txt

genotools

entry_points.txt

[console_scripts]
genotools = genotools.__main__:handle_main
genotools-download = genotools.download_refs:handle_download