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0.1.4 uce_model-0.1.4-py3-none-any.whl

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Project: uce-model
Version: 0.1.4
Filename: uce_model-0.1.4-py3-none-any.whl
Download: [link]
Size: 32187
MD5: 420ad72ca4e4d1472a9104b35aab052b
SHA256: e3be550fa01087e03787a0e3c6e3323392046a11b90fd7b444b5d155ba38e393
Uploaded: 2024-02-19 22:59:34 +0000

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METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: uce-model
Version: 0.1.4
Summary: Universal Cell Embedding model for single-cell RNA-seq data
Author-Email: Yanay Rosen <yanay[at]stanford.edu>
Project-Url: Homepage, https://github.com/snap-stanford/UCE
Project-Url: Repository, https://github.com/snap-stanford/UCE.git
License: MIT License Copyright (c) 2023 Yanay Rosen, Yusuf Roohani, Jure Leskovec Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Keywords: single-cell,RNA-seq,embedding,pytorch,uce
Requires-Python: >=3.8
Requires-Dist: torch
Requires-Dist: numpy
Requires-Dist: scipy
Requires-Dist: pandas
Requires-Dist: tqdm
Requires-Dist: scanpy
Requires-Dist: accelerate
Requires-Dist: requests
Requires-Dist: urllib3
Requires-Dist: gdown
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 7410 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.42.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
uce/__init__.py sha256=WCtkYiqa22ZxDhkZJinrFkoHegrnkp-S8qF3OOh8P2I 68
uce/eval_data.py sha256=8K36IXGpEwLlbcdgm95bxMQb-6P-qPwwv7rrmo4K8xM 7337
uce/eval_single_anndata.py sha256=Hoo12zY_I9vL_6SQxuFDd6RYFXVc-M4IX1StRNAvYv0 6383
uce/evaluate.py sha256=KOOsSjkm4k4GXV0mG2A9pIKEqMwcDBuu91nY8rbYMho 16722
uce/model.py sha256=gHZEzXXvmb1Md5YIl-ymuYE9bpfp6xr0T3fm5vEiHdI 3939
uce/utils.py sha256=q5WIjTo5apD7GgOol0pYG13ly75NLAgIT70DXeYRPxM 4263
uce/data_proc/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
uce/data_proc/data_utils.py sha256=6REzGiFYR2ywHVcGBeGRt71Gm0EC2B_TZ5hKtwOLuhs 10152
uce/data_proc/download_proc_czi_cxg.py sha256=dWaXXM_C2FQZgZ_mc5tNyCq1vPeW06NqucHGR-mdMIc 11935
uce/data_proc/gene_embeddings.py sha256=5eIhfLbUSSTh_PhFvclK612FV0QCc8Dc4jBr-Wzd2KE 3881
uce/data_proc/generate_reduced_chrom_files.py sha256=mRIDJfBPU0KdohCOcLJ4NLbBIoOkHJwcX36NEs3oB1w 10521
uce/data_proc/preproc_many_dataset.py sha256=BsIwC2-AEqd3t0Mm1gY1ixrUjbOulg5orEDGXCuNvEo 7703
uce_model-0.1.4.dist-info/LICENSE sha256=vwaAEu_POnlq8DiJ1CFN9DW8EiCsl5gcd6FPFMUHDN4 1098
uce_model-0.1.4.dist-info/METADATA sha256=J-__24enENp-6t4OfQvhFswAuF6hP-99T79-GO9bgeY 9340
uce_model-0.1.4.dist-info/WHEEL sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM 92
uce_model-0.1.4.dist-info/entry_points.txt sha256=phOKG4Ty_SbsytoKo0H8j5nfk9FR4XzWPMMp_LTS9sA 73
uce_model-0.1.4.dist-info/top_level.txt sha256=xNUI0N_qBhd_gry3nJ46QtE1UuCPCH6An4wL3rwyato 4
uce_model-0.1.4.dist-info/RECORD — —

top_level.txt

uce

entry_points.txt

[console_scripts]
uce-eval-single-anndata = uce.eval_single_anndata:main