Wheelodex » Projects » umitools

umitools

View on PyPI — Reverse Dependencies (0)

0.3.4 umitools-0.3.4-py3-none-any.whl

Wheel Details

Project: umitools
Version: 0.3.4
Filename: umitools-0.3.4-py3-none-any.whl
Download: [link]
Size: 1301914
MD5: 7dd8a41864805c4a99d368ede680ac9c
SHA256: a5014229bfd6c94d380b7d6e9c954963e43c0f9adf9d456b1960a2a599f2f149
Uploaded: 2018-05-16 20:37:25 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.0
Name: umitools
Version: 0.3.4
Summary: A toolset for handling sequencing data with unique molecular identifiers (UMIs)
Author: Yu Fu
Author-Email: yfu[at]bu.edu
Home-Page: https://github.com/weng-lab/umitools
License: GPLv3
Keywords: RNA-seq small RNA-seq unique molecular identifier UMI PCR duplicates PCR cycle starting material sequencing depth high-throughput sequencing deep sequencing transcriptome genome umitools RNA small RNA sequencing
Classifier: Development Status :: 3 - Alpha
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Requires-Python: >=3
Requires-Dist: pysam
Requires-Dist: editdistance
Requires-Dist: networkx
[No description]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.30.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
umitools/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
umitools/est_err.py sha256=y_r5xGLd9ToZwmGtsBwbaQmAWr8TLMt8bWzQQ0gp9ag 4889
umitools/find_hot_loci.py sha256=UCn2Ai5DQLNhaLdHDJX0uDBaj_d0OYzZ8rCz99lQRNo 4979
umitools/reformat_umi_fastq.py sha256=0sPYjgL7OZ6ZcCChgjOBoooGLgZZ4z2AFeW5Y2E3D-Q 11556
umitools/reformat_umi_sra_fastq.py sha256=Z0gfRRGWMRpZCaecGdMfAwLdq88wUHDxG40ioXgB46A 13811
umitools/umi.py sha256=5YqC5g1N2yDAlNNmRh-dNNg1by_l2yucrmpiA3S2SAY 8748
umitools/umi_graph.py sha256=v3suHvx2zsiB6PdhtOnbkIIJDiCMGOGq1yZns6WMFus 3387
umitools/umi_loci_with_duplicates.py sha256=sIb4TJEt8Hfv1vbeHcO_NfUKOQ97L0u5PtSkEVcv_Ls 6901
umitools/umi_mark_duplicates.py sha256=bEVPyLS2v29wtboY-9lAr9pl6-PsXmUx50RT8J4MTzM 9955
umitools/umi_simulator.py sha256=2-qkpV1fBh_ogrttOvsNUZpvLLwNkGFJZlpOX-Libds 15822
umitools/umitools.py sha256=RoZi9-mRCag_iVP_o-DvyFPmm0JPFozwJLIFQsjB29E 1759
umitools/data/umitools.test.error_in_sra_umi_locator.fq.gz sha256=vW7dWEf5k71mBup3gaHQryRUzIad-TP00Bf2j-l5gXI 208
umitools/data/umitools.test.r1.fq.gz sha256=lRm5N9ckT2bgZleWeQvpUfErsb97oIyBg8dUQfpVyto 458971
umitools/data/umitools.test.r2.fq.gz sha256=TU7d1DTEAEozy-kRLHm2xfePp1jmN7zYagIPb6lEtC4 482298
umitools/data/umitools.test.small_rna.fq.gz sha256=gUdxdSIkl52uv1aSx_Wq-ECpfl4glAtRR24Q9a6mm8c 331365
umitools-0.3.4.dist-info/DESCRIPTION.rst sha256=OCTuuN6LcWulhHS3d5rfjdsQtW22n7HENFRh6jC6ego 10
umitools-0.3.4.dist-info/METADATA sha256=sHT22kyaJa5NT6BKKhmoCSEDA6APyFYt6f-85c4nP9Q 1108
umitools-0.3.4.dist-info/RECORD — —
umitools-0.3.4.dist-info/WHEEL sha256=8Lm45v9gcYRm70DrgFGVe4WsUtUMi1_0Tso1hqPGMjA 92
umitools-0.3.4.dist-info/entry_points.txt sha256=PJNvnLKAD61Pdz498kttU6KRbq2U34u1QaCdIYPRhN4 269
umitools-0.3.4.dist-info/metadata.json sha256=STKMSyjjLCE71IfXoNl-CpT1Z6kPZ_likS8-sYxiwgc 1944
umitools-0.3.4.dist-info/top_level.txt sha256=4tmLgzihuoGE1DRbmCS0iqll9RjbNpTDYYfmlDMKO3s 22

top_level.txt

umitools
umitools/umi

entry_points.txt

[console_scripts]
umi_mark_duplicates = umitools.umi_mark_duplicates:main
umi_reformat_fastq = umitools.reformat_umi_fastq:main
umi_reformat_sra_fastq = umitools.reformat_umi_sra_fastq:main
umi_simulator = umitools.umi_simulator:main
umitools = umitools.umitools:main