Wheelodex » Projects » vafator

vafator

View on PyPI — Reverse Dependencies (0)

2.2.0 vafator-2.2.0-py3-none-any.whl

Wheel Details

Project: vafator
Version: 2.2.0
Filename: vafator-2.2.0-py3-none-any.whl
Download: [link]
Size: 32886
MD5: 696edf0db310af80c24eb1e22b19b125
SHA256: 416f804c949dd64934c945ffd953861bdda6bd3a458a45f2cd4d3097a831c693
Uploaded: 2023-01-30 14:40:50 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: vafator
Version: 2.2.0
Summary: Annotate a VCF file with AF, AD and DP from tumor and normal BAMs
Author: TRON - Translational Oncology at the University Medical Center of the Johannes Gutenberg University Mainz- Computational Medicine group
Author-Email: pablo.riesgoferreiro[at]tron-mainz.de
Home-Page: https://github.com/tron-bioinformatics/vafator
License: MIT
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Healthcare Industry
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: Unix
Requires-Python: >=3.7
Requires-Dist: pandas (~=1.3.3)
Requires-Dist: pysam (~=0.19.1)
Requires-Dist: cyvcf2 (~=0.30.14)
Requires-Dist: logzero (~=1.7.0)
Requires-Dist: pybedtools (~=0.9.0)
Requires-Dist: scipy (<2.0.0,>=1.0.0)
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 17564 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.38.4)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
vafator/__init__.py sha256=NuqwKCeNc1ADkT2mEtkjPe2_Me1pFQKirFiHN0-9OZg 96
vafator/annotator.py sha256=HCrvlqvUesOUqdRP6477U1NlanpWXhDsK1X8m5nuTo4 23530
vafator/command_line.py sha256=oKaSsfBCxF3CssZkJi0_V_k7Qq9qTmoTV9bLxazVXi8 9844
vafator/hatchet2bed.py sha256=YRAABTAQJ38QgOHvlEBhkTI5FDdWldx1tV22OgM-A6Q 1028
vafator/multiallelic_filter.py sha256=su9ev6cqDeW_fADIHTdqy--RbA12E3OrnKrGtNcGRo0 3626
vafator/pileups.py sha256=tHOeF_dNvKo7yb0JcL3m5C5QFFB5HL1dQ6g1pURVC9g 9247
vafator/ploidies.py sha256=xePIOXBo_HZJt0qIiADNKTxGKpp22i52XUDHH6DYewE 1464
vafator/power.py sha256=drS33wx0eVt4ssqfeT6PTgWSJnO4ZHfBmcZyoBijUbo 3662
vafator/rank_sum_test.py sha256=-vUQQPbVx2xBdwQIpFuufUQpUK3TOpzVogp2EOBCjEI 739
vafator/vafator2decifer.py sha256=maOpC2Q7Q1QfufqJlprNIveIyTPvOW9p84Z7v97f2_c 11251
vafator/tests/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
vafator/tests/test_annotator.py sha256=QZFJXB6Ba_xnUt2s_KAIPzmiVDoI29CAlFdU4Z2uYe8 18094
vafator/tests/test_hatchet2bed.py sha256=gluy4pU9MGbcmuQ2FUQFKvpODTmw5-vzgnoHDJQxnZg 693
vafator/tests/test_multiallelic_filter.py sha256=yXz1Uc8tVIJZBj7eV-AX96KKizxqmgB1tS0cRYx02y8 4926
vafator/tests/test_pileups.py sha256=9Axx7H4NcEMAr6RIEX0ZaKCbe2uPoB15lyqmBxhNVmY 4386
vafator/tests/test_ploidy_manager.py sha256=SCwudyFk_Guf7xhAVxZtVU3ImbgC3Gc-U2FaL1Frngg 2587
vafator/tests/test_power_calculator.py sha256=8-egW5dpjcv30o45ax1r0TRfyHWCE-M6kE_z7MWukik 7219
vafator/tests/test_rank_sum_test.py sha256=yPiaiCb4R2OYElyYIEyLOnjGe7qYpc2cUXfQJMsGa4I 1297
vafator/tests/utils.py sha256=4MXKUAMVPVbVmWjiia-dNS96qQ54WwZzE7fhlq7TeTI 1109
vafator-2.2.0.dist-info/LICENSE sha256=L3fneZGpwXnQ0oSiDCKYvr6IOfd8lKMqjnlvAXW2ICg 1066
vafator-2.2.0.dist-info/METADATA sha256=sS-BtSq7iWi_KrHlNOwP1kE6-iLZ1HBUyAV3oK_nmN8 18819
vafator-2.2.0.dist-info/WHEEL sha256=2wepM1nk4DS4eFpYrW1TTqPcoGNfHhhO_i5m4cOimbo 92
vafator-2.2.0.dist-info/entry_points.txt sha256=HzM9FiqC2krQCWQeDhXDPmHUkPqBm4qNuj9OGIMJ4o8 226
vafator-2.2.0.dist-info/top_level.txt sha256=ZhFEDdWPUcjshxCDSWLeOc25SGE7_tPhgNpHEbZMS4M 8
vafator-2.2.0.dist-info/RECORD — —

top_level.txt

vafator

entry_points.txt

[console_scripts]
hatchet2bed = vafator.command_line:hatchet2bed
multiallelics-filter = vafator.command_line:multiallelics_filter
vafator = vafator.command_line:annotator
vafator2decifer = vafator.command_line:vafator2decifer