Path |
Digest |
Size |
vpt/__init__.py |
sha256=jrV1pbLBtmcKLpk_zNRPkzRm6xi5x2bRsX-H-Mcl-gY
|
626 |
vpt/app/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
vpt/app/context.py |
sha256=Owref9oqsGhD1YsbG4aKciv79aKyBMFHGSHDei1t8UM
|
5765 |
vpt/app/empty.py |
sha256=cW47Zmpg5D9TswF8EIpIKeVbcFjmD2bfpqOT1QlqaEs
|
161 |
vpt/app/task.py |
sha256=pIqX73R52VbAPmzYpVAO-xgjbQMGetDDlYv3GP1oxf4
|
334 |
vpt/cmd_args.py |
sha256=5KmgkBHLZmYbhNNUr91PWkFjRAwpUFoJStBVR6Dc4t0
|
9186 |
vpt/compile_tile_segmentation/__init__.py |
sha256=fVXeu8DDCYxWV5tcwzuflLLyiSsHuYA-R7gJb0iGvig
|
260 |
vpt/compile_tile_segmentation/cmd_args.py |
sha256=TN1tCNIXdmQSYVMwhuUqc_rAM3h5qL9IngpxP7uByts
|
1840 |
vpt/compile_tile_segmentation/main.py |
sha256=46vwMHvD5XwmG3KwFNvuiKa7TyrJ6gEMCetNFENaLXE
|
10710 |
vpt/compile_tile_segmentation/parameters.py |
sha256=yuRq_VRIPtIblfG9r8gUQuoCJdURSZ5Ezl4QpWAqiK8
|
3045 |
vpt/convert_geometry/__init__.py |
sha256=7uEFduUozzyav4yZoR-YfsbquuxpjEmFPXWT3Qh5UrQ
|
235 |
vpt/convert_geometry/cmd_args.py |
sha256=AkU-iyI_stKnbcgtjI8Llx4oYL6aTuu_e_KtcZyySSM
|
6357 |
vpt/convert_geometry/converters/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
vpt/convert_geometry/converters/entity_id_generator.py |
sha256=MXYSoFHcS5GVi0JKjZsJp6hzaHD9ZtrLbB31EKNAFcU
|
549 |
vpt/convert_geometry/converters/hdf5_converter.py |
sha256=n8VuaW-qsAkn_wATMUJCJ74pgCZ51qGn-rlM2Pj4bec
|
3039 |
vpt/convert_geometry/converters/old_parquet_converter.py |
sha256=8I96V-jJxbkE_NVdK5mak5qdEU95e5OpsYZ5bmzf-J4
|
2164 |
vpt/convert_geometry/converters/qpath_geojson_converter.py |
sha256=QPbPXdpac-gIh0zQdzT7yKG3dqCeI9l9AlOkmdeZmBo
|
1661 |
vpt/convert_geometry/factory.py |
sha256=Op3VPJ4ZOFl4zWWGWbEkj76lFuZt6l3e0PqJXXZxGkg
|
1514 |
vpt/convert_geometry/main.py |
sha256=Zc4lOnQ6x7ynCaR93S8e4BJ05ub_dA6LvVoGovk3v5g
|
3683 |
vpt/convert_to_ome/__init__.py |
sha256=CYAvfbpy5NhwKCqC36B-eKwLUaW27XGE7uQHXwzyp2Q
|
454 |
vpt/convert_to_ome/cmd_args.py |
sha256=D6wx6vFyGVHhjRFjvIIcJFzKEO9HOxbCUsFPaChNkDQ
|
2429 |
vpt/convert_to_ome/main.py |
sha256=2Il9cNMtDhAHZnZkmzt6RmEIT7PYXU2X2HOCw5gID0I
|
1925 |
vpt/convert_to_ome/main_rgb.py |
sha256=QfPNkEyORXnHzhGbrosxjwbgvdvM2vNmu4KQvyTnio4
|
2152 |
vpt/convert_to_ome/rgb_cmd_args.py |
sha256=Afm4-JCssYdwRxQxXQwwA_z-XHQFePalNxij3wN0q8M
|
2465 |
vpt/convert_to_ome/tiffutils.py |
sha256=92xpSiQdRrDXNMA6FJtYz4o3zjezQMdG50ZsvElYS7k
|
3975 |
vpt/derive_cell_metadata/__init__.py |
sha256=UT93Ymzq8TvVjJ8p8FmfWSn7ku73Qj0dwf4R7cIRflc
|
269 |
vpt/derive_cell_metadata/__main__.py |
sha256=9062GTEbfP2yigNgeTYAyIQsqoWALqiI_jO33ClwVU0
|
217 |
vpt/derive_cell_metadata/cell_metadata.py |
sha256=U9K91C52mBNm4vZGphCxn260o_M5LGkzPUWNlyFHVfM
|
5601 |
vpt/derive_cell_metadata/cmd_args.py |
sha256=cqJ2ccvRSuhuCHqDx0s5X5LXPh6tmFrwVDyRTNGYrS4
|
1908 |
vpt/derive_cell_metadata/run_derive_cell_metadata.py |
sha256=GDaTOZN4kiFA0SQCZqSQwQIu3I1nPe5db0Idy5Fnfdk
|
1258 |
vpt/entity/__init__.py |
sha256=0umZ8r4c50yOsE4iJw6dKyquUP8erKNh_QPxpqLSRxA
|
666 |
vpt/entity/empty_resolver.py |
sha256=3FD7wQaoh9kzeWZ7sTDY2gqHSjB8fnXk_Znu6J0Y58g
|
361 |
vpt/entity/factory.py |
sha256=BJjsaCnDnYViDyK3VKbsSzkomxVFK5Gvv25FxAwzw-4
|
1638 |
vpt/entity/relationships.py |
sha256=Bfmff8t0fGaavrAys-rOLLXZp-7SgLmyzfY0WD0q_w0
|
5854 |
vpt/entity/resolver/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
vpt/entity/resolver/child_intersect_one_parent.py |
sha256=nQma2BVbssqr-kdRPLk3zYVsCvYLxUUetanfkz3xMGE
|
1904 |
vpt/entity/resolver/child_must_have_parent.py |
sha256=EtBS1ZgHP3hOw3EmdFkqUEFyxMtL33lCtjvNcSV2Tl0
|
2133 |
vpt/entity/resolver/maximum_child_count.py |
sha256=wSgCWfbE1Gy8nWt4WKk9PQhoORyXoD6BM6Jgfi6sp-s
|
1285 |
vpt/entity/resolver/minimum_child_count.py |
sha256=e7RwMMEzn9KjegWi6jStri8eh6iYnS1vCf0-2w-kJXs
|
1292 |
vpt/entity/resolver/parent_must_cover_child.py |
sha256=FkBEY1qGOR5EjmBiz89yOzqY3guq-2h2R7p7e0oD4o8
|
1846 |
vpt/entity/resolver_base.py |
sha256=9apRPALKHm6AKI1SJ3yaX2gBFqBdeYohhfEtCxRR7DA
|
1972 |
vpt/entity/segmentation_results_worker.py |
sha256=NvhPasG_qgVAGN64ktCzbFoAZQncd_fSFlKeLb8jfaU
|
3591 |
vpt/extract_image_patch/__init__.py |
sha256=KbQda8LjDcexeNfVVd0n8bVyZJsWTEFNKSXgHnKewT8
|
299 |
vpt/extract_image_patch/cmd_args.py |
sha256=7XmWFCF-PygL3KXMTLM_5FMXFHrXfPlcI4lmD3dgIUk
|
4852 |
vpt/extract_image_patch/main.py |
sha256=X5tzYp3DrHuiwyPhNXvdX_VIjRbcgkA96avOBvtxnqg
|
898 |
vpt/generate_segmentation_metrics/__init__.py |
sha256=wN5zMoFJCL_Up7qrTmIeXymR6ZfyBcx2clPOHxrHQsk
|
276 |
vpt/generate_segmentation_metrics/cluster_data.py |
sha256=wTJcH7zNGKvj29vaacDk5WLHhkkqs_k74nzKrQbg9S0
|
2296 |
vpt/generate_segmentation_metrics/cmd_args.py |
sha256=vIg3uUmNUUYi6G_qr-pQPbAjq3GMMisXFT5siX4J8YU
|
9012 |
vpt/generate_segmentation_metrics/compute_metrics.py |
sha256=BMro2aBdB2aMIUOcXhaBcYF0QqSk8UXVKYC-ZrBsCZQ
|
12443 |
vpt/generate_segmentation_metrics/distributions.py |
sha256=r0RCmu_gInZzfGKVnwI1eyWm-VIvG8pLa1sB9uieNEk
|
26164 |
vpt/generate_segmentation_metrics/distributions_utils.py |
sha256=TF2D7bFLETN9_C0ctwlnXXIsGcE0IFQQOreZTF4lo_g
|
4604 |
vpt/generate_segmentation_metrics/main.py |
sha256=23g11DTueU0C9r0pzDnGVIHOHxLyX72F097jX9G0jzY
|
2529 |
vpt/generate_segmentation_metrics/metrics_settings.py |
sha256=P32sRNkXX7BqsjCBYOlVHGZqQWETbhgixdJSGJuK610
|
672 |
vpt/generate_segmentation_metrics/output_tools.py |
sha256=aKPdyiOw0dpdD_9Cg-ugPSRttyaWyaR13fXrm9C2CIM
|
917 |
vpt/partition_transcripts/__init__.py |
sha256=-7NsgZMHJAQyZTy1tux0SmFQqUwXDhiNHWmg0JB6W90
|
390 |
vpt/partition_transcripts/__main__.py |
sha256=3k39SIF_sp0zB9nXqXjcn1QYaBWnrcRXBVbBPegSW_s
|
222 |
vpt/partition_transcripts/cell_x_gene.py |
sha256=SBr-FVxnJtkzYMUh3nd9373vCnjn5q4unpsULGe5EDw
|
4873 |
vpt/partition_transcripts/cmd_args.py |
sha256=7K4eT5nlm86zGxNkk6VAXd19ZrMDzmbUoBZFZATSpAA
|
3345 |
vpt/partition_transcripts/run_partition_transcripts.py |
sha256=dNRcgOfGi6ZETVVl-5enGbeRKr3BURk4B2nxA1lwjNA
|
1569 |
vpt/prepare_segmentation/__init__.py |
sha256=KGawc2zPsZllAVcInmQBCr8ZrVLuv6K02aR9ZApHooc
|
248 |
vpt/prepare_segmentation/cmd_args.py |
sha256=llzwAFhrhwZPMF7zZeQAy6QlPZT-Jq0ahiSGifYgRLI
|
4097 |
vpt/prepare_segmentation/constants.py |
sha256=KsthsPFBEJg3im89uXtSJ0L0dAd04fkyTVyValRcz8g
|
53 |
vpt/prepare_segmentation/input_tools.py |
sha256=YTyzJGh4xmyiKHk93cHTJ0LH5G_qPZ8PIlzNL3kG3bs
|
1405 |
vpt/prepare_segmentation/main.py |
sha256=Lv1dYbFEM3HXVVI7uqRMeBk-QVvo2GWTxCmA7bCcUhk
|
3740 |
vpt/prepare_segmentation/output_tools.py |
sha256=2t2rZD88mSdXPQxSONZsZYA3z8KJ5B0gthIZu_e54a4
|
562 |
vpt/prepare_segmentation/tiles.py |
sha256=opw8qTD4CdtriiseccaBssRybAMq7yvdL8hmV6Jy53Q
|
814 |
vpt/prepare_segmentation/validate.py |
sha256=cE59dNVDDK9iOp4ymipdIoAPYu9NTZB1OPjcbFAYjbs
|
5884 |
vpt/profiler.py |
sha256=NCGJ0QUmCwSqIfEEQ0G8IKo3RiwZvWGKfjNwCusvz1k
|
1427 |
vpt/run_segmentation/__init__.py |
sha256=L35Y_pNS-qhAhA9HFiLCae5aYzQ8wr4mkt0VQWM1xfQ
|
224 |
vpt/run_segmentation/cmd_args.py |
sha256=qNgH-nDRfmqwwyZXJGBDp52KUVxyXxLWbZOvM5EsAZg
|
4694 |
vpt/run_segmentation/main.py |
sha256=vmwq6973Suc7DD4ufT58WTy2DqefPY0WVd-VVccATuA
|
1625 |
vpt/run_segmentation_on_tile/__init__.py |
sha256=0-bfFvI_dP9pEjxes1s4sQ3kmxgdmQsGb0ExQ7QigGc
|
257 |
vpt/run_segmentation_on_tile/__main__.py |
sha256=WUaNGyNHbMblHm1eOQB51kU_S9NmzoYwjPA-HgVU6Lg
|
90 |
vpt/run_segmentation_on_tile/cmd_args.py |
sha256=OjB-NK5XFwW5DUz5oa4VOOQKCLzoK5lLX2vYq7fjswE
|
1997 |
vpt/run_segmentation_on_tile/main.py |
sha256=4ve8OnQ1t2Y0wBqZFWjxvNX8VhuIpWic-VMtzUCRyho
|
5097 |
vpt/run_segmentation_on_tile/output_utils.py |
sha256=2mEDtE6K5BoHcQEQQLFdP1xKjGOpXLiPh6Ylk5tSa8g
|
4030 |
vpt/segmentation/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
vpt/segmentation/segmentations_factory.py |
sha256=rkRSBoA_PRbk_b768D2RKLS4KEATL0K_BmCMYTfgGIU
|
1084 |
vpt/sum_signals/__init__.py |
sha256=IXQeLduXLTM7WP_yCpkqdJP-ECvV8eJRIWLpdQL61n8
|
204 |
vpt/sum_signals/cmd_args.py |
sha256=deb7_Hz5AGAIKNHR1tZ5g17HDKLKOXQsqFwOe3UbscM
|
2903 |
vpt/sum_signals/main.py |
sha256=9f60DBXQiRm1aYeDVqvupLx535Nf8tAGTXJhzBVgcoM
|
7007 |
vpt/sum_signals/validate.py |
sha256=yKkFCuoL17piTYqqV4Igzg54c07yrTwneYKE9Ei0irI
|
463 |
vpt/update_vzg/__init__.py |
sha256=9l28l_FRoXi6Q_jkMzr4Y8sIBZxPQQ9nkv4b-SPdNW4
|
377 |
vpt/update_vzg/__main__.py |
sha256=i7-5cvbt6xGs0TitlOdSrCpO6nWcQzkvMQUSGyi8ecA
|
132 |
vpt/update_vzg/assemble/__init__.py |
sha256=vJOQWsSAW8KMJnOV_S-7JoT4DlZRlAVCz6g_-OboE0s
|
155 |
vpt/update_vzg/assemble/cell_coloring.py |
sha256=CFphC_qWwmo6L9-LIK37kagODPtz35j29rvquq9JfyA
|
3566 |
vpt/update_vzg/assemble/dataset_assemble.py |
sha256=kXje6Kxfdu-suCCoB1jB_LDhCA2BQMMOLoWBdk81loE
|
2572 |
vpt/update_vzg/assemble/expression_matrix.py |
sha256=6kiTKbZcnh_0Vly3Q4bOc7kVHEfNFLnPyKX_OmncGcs
|
6018 |
vpt/update_vzg/byte_utils.py |
sha256=QPXj2XVi5Iih71Bv3YrSfSm5Jo1MH96aA0BFCrj-uYg
|
358 |
vpt/update_vzg/cell_metadata.py |
sha256=zgQn_9i3_dXNYlldHX7imJLfQlyYfprlOkMh2vKmB3s
|
2609 |
vpt/update_vzg/cmd_args.py |
sha256=-0xqr7v7kgpmTF8F2dvYIk6goXVlFwCJuFiv3G1QWrA
|
4699 |
vpt/update_vzg/imageparams.py |
sha256=5qop1YgWPwUC_P0jMphP1dZSQkr06x1GymKzAw4pcko
|
346 |
vpt/update_vzg/manifestgen.py |
sha256=8KHPE7aoXaIPNvvVNPgxWNqn3AzqgiLQAeu1bDJczYw
|
2436 |
vpt/update_vzg/polygon_transfer.py |
sha256=PuvpLZ_K_cW8WmxTR6tfjarQ8wGk78wgmuXZnIzqpN8
|
8788 |
vpt/update_vzg/polygons/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
vpt/update_vzg/polygons/packedfanpolygon.py |
sha256=l5cWGzUOVjOVwZoTz_JQ_6veeVnUCo1AjKG1J47_dbw
|
5420 |
vpt/update_vzg/polygons/packedpolygon.py |
sha256=uaRyumMmyL2QIiGo5K_TfBTGhKdVOT93uoeQi0F5Tv0
|
1766 |
vpt/update_vzg/polygons/packedstarpolygon.py |
sha256=sF79ISBREtj8mqi-Oxsb44KBPw_D7UKgPnrCKI4eXUk
|
5549 |
vpt/update_vzg/polygons/poly_partition.py |
sha256=jc5DVj65GyUvqavtF252W83s0ksnZTQhxGi6dRSY_BQ
|
10492 |
vpt/update_vzg/polygons/polygonset.py |
sha256=B8HooIETARwiQ0sTSyss9Sm9O6Z7h1Jl9tm2YZcWEFk
|
14876 |
vpt/update_vzg/polygons/polystructers.py |
sha256=YhNNXxaooO3nk4CQsqvozI2Kxoo0g47j__u-7vkwiUk
|
1884 |
vpt/update_vzg/polygons/vector_operations.py |
sha256=niU9KYZpjmGsLFnObzmNp5oAlga8hU3eKWEG2tgejIY
|
4556 |
vpt/update_vzg/run_update_vzg.py |
sha256=cZsQMqyjj_tj79GIM7lSCtz29Kq_dzoDPNN7cJRImrs
|
7431 |
vpt/utils/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
vpt/utils/boundaries.py |
sha256=ITAkTVNtbgmUQsU1E008VnUnZnpJptkZmSGhtNiA5ak
|
594 |
vpt/utils/cellsreader/__init__.py |
sha256=bwGratt0ZSKL_E0Hb1emdLUxkrN5H3Xqf-_lffCw7YE
|
508 |
vpt/utils/cellsreader/base_reader.py |
sha256=sFHON64o81_cZiBQRbTqwXGneW5RBe0NprVDmLYVw_g
|
569 |
vpt/utils/cellsreader/geo_reader.py |
sha256=YXeOSM6yQ2XKUjiuhLMvd3EUCXCtaCMwDaOWK1bpzMo
|
3145 |
vpt/utils/cellsreader/parquet_reader.py |
sha256=7qTGOLE5smzHSc4fTxL1FZtHDTHku5g4q-Qrum3gu5o
|
3943 |
vpt/utils/cellsreader.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
vpt/utils/general_data.py |
sha256=4aser1uQ-F1PIrycYgqP1o5B-Cta9mhUYl-y73avCPw
|
2446 |
vpt/utils/html_template/cells_report_template.html |
sha256=Dob6xIheZ-aVRUWPkkGDgpYqmSaYfBm3vwN9NaNONzI
|
3673 |
vpt/utils/html_template/template.html |
sha256=zdpH0FmBAfuVAUTPWlhFcD-PcKqk90Ly0XvF6-sKrq4
|
132074 |
vpt/utils/input_utils.py |
sha256=yGqtA3E0yNF3lrOkSF-W6QyaeH6ETnorJ10yH5-oRF8
|
1587 |
vpt/utils/metadata.py |
sha256=dLNI2J6iDRZKBe2YGTcogHZ4nATp9OW9F5ZnbQEA3Mg
|
1287 |
vpt/utils/process_patch.py |
sha256=3_3lW5W6IfTBN4LNCBkWlW6WaNze2vCfsm6PshmzZes
|
5545 |
vpt/utils/raw_cell.py |
sha256=JS9hdfJSB9LgmQ9vtoyKw3arCHiiLNx7Xbh3XEz1LD0
|
1012 |
vpt/utils/seg_json_generator/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
vpt/utils/seg_json_generator/cmd_args.py |
sha256=IIK0Mz0JhUtutvh1B8Oag-OTZ0-FZS34nQI92RNGdB0
|
1072 |
vpt/utils/seg_json_generator/input_utils.py |
sha256=mA0KrumLUqY1Hom0xQnHntFj8PtBetSR6exFNRb71Z8
|
3512 |
vpt/utils/seg_json_generator/main.py |
sha256=MclBd_jxy3d7V0fQSfnwaSsHF7BlwCLkGo58XtlH7rY
|
1473 |
vpt/utils/seg_json_generator/templates/cellpose_default.json |
sha256=0SOzjPIcm4rDzjX4FGMTzr1P60md-2YpebfwBuOOCKY
|
3459 |
vpt/utils/seg_json_generator/templates/watershed_default.json |
sha256=hV7BHslGbfd8V3l7pfJna4pXNm7h2jXtrVtG8CPBycA
|
1699 |
vpt/utils/seg_json_generator/templates/watershed_m.json |
sha256=yehwihWo3Zna2usAwTSObIBii7mXkeh-C5vwuoJvDrI
|
1969 |
vpt/utils/seg_json_generator/templates/watershed_m_downsample.json |
sha256=ttSg-gXocQopJqqAaOWeZG5aAHDRCBH7qRkjpc3Q1hg
|
2181 |
vpt/utils/seg_spec_utils.py |
sha256=vO_zVss-oDliJ240mv1aRkWWkRV1u3e49IgbOM-Qz7k
|
6713 |
vpt/utils/validate.py |
sha256=jpehzPpDzFVtjNT450y8vDaBMf4hSz0LyTZFN91Uls0
|
1697 |
vpt/utils/vzgrepacker.py |
sha256=_UsEu2fU4XRGng4VN1a_OaTIJoZb7zFwjA6mdeiIv2k
|
11846 |
vpt/vizgen_postprocess.py |
sha256=2BLynSBi1AfT0jYqM6IPVy-H-uriVNC022eliH42TcM
|
2601 |
vpt-1.2.2.dist-info/LICENSE.md |
sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ
|
11357 |
vpt-1.2.2.dist-info/METADATA |
sha256=zFrbvu-Iv91PjeG0xpVVa4y3EK38bsMbvR9bsImX-w0
|
7616 |
vpt-1.2.2.dist-info/WHEEL |
sha256=FMvqSimYX_P7y0a7UY-_Mc83r5zkBZsCYPm7Lr0Bsq4
|
88 |
vpt-1.2.2.dist-info/entry_points.txt |
sha256=0ramFJ4Dlrlys5p_SsNKAMzqpXkaBkTa_9SAd0euPz0
|
58 |
vpt-1.2.2.dist-info/RECORD |
— |
— |