Reverse Dependencies of zarr
The following projects have a declared dependency on zarr:
- dye-score — Utilities to build the dye-score metric from OpenWPM javascript call data.
- earthnet-minicuber — EarthNet Minicuber
- earthnet-models-pytorch — EarthNet Models PyTorch
- easyclimate — A line of code to analyze climate
- echofish-aws-create-empty-zarr-store-lambda — no summary
- echofish-aws-raw-to-zarr-lambda — no summary
- echofish-aws-resample-and-write-to-zarr-store-lambda — no summary
- echopype — Enhancing the interoperability and scalability in analyzing ocean sonar data
- elektro — electrophy for arkitekt
- emobject — data abstraction and libraries for spatial omics
- empanada-dl — Algorithms for Panoptic Segmentation of organelles in EM
- enigmx — enigmx package
- eo-learn — Earth observation processing framework for machine learning in Python
- eodal — The Earth Observation Data Analysis Library EOdal
- eoreader — Remote-sensing opensource python library reading optical and SAR constellations, loading and stacking bands, clouds, DEM and spectral indices in a sensor-agnostic way.
- eosets — This library aims to simplify any process working with different sets of EO data handled by EOReader.
- eotransform-xarray — Implements transformations on xarray data structures, to be used with eotransform streamed_process.
- ESMValTool — ESMValTool: A community diagnostic and performance metrics tool for routine evaluation of Earth system models in CMIP.
- eurec4a — common utilities for analysing data from the EUREC4A field campaign
- exp-heatmap — Computing and drawing ExP heatmap for displaying complex cross-population data
- exp-selection — no summary
- ez-zarr — Give easy, high-level access to ome-zarr filesets.
- facit — no summary
- fastbt — A simple framework for fast and dirty backtesting
- FastFuels — 3D fuelscapes for the contiguous US
- fastfuels-sdk — 3D Fuels for Next Generation Fire Models
- fastmeteo — Fast interpolation for ERA5 data with Zarr
- fcx-playground — A package that has a core fcx data processing module and a module to visualize the processed data in python interactive notebook environment (playground).
- fibsem-tools — Tools for processing FIBSEM datasets
- figanos — Outils pour produire des graphiques informatifs sur les impacts des changements climatiques.
- fiiireflyyy — A python package covering miscellaneous uses, from system management to machine learning and image or data processing. Developed for personal uses.
- fishspot — Tools for finding discrete bright spots in images
- flask-image-search — Image Searching For Flask and Flask-SQLAlchemy.
- fractal-tasks-core — Core bioimage-analysis library and tasks of the Fractal analytics platform
- funlib.persistence — Interfaces for data (arrays and graphs) and storage formats (databases and file formats)
- Fused — no summary
- fuslib2021 — Library for remote sensing images fusion
- gandlf — PyTorch-based framework that handles segmentation/regression/classification using various DL architectures for medical imaging.
- gatorpy — GATOR: A scalable framework for automated processing of highly multiplexed tissue images
- gdptools — Gdptools
- geodesic-api — Python API for the Geodesic Datascience Platform
- geoglows — Package for accessing data from the GEOGLOWS Hydrological Model
- geotiff — A noGDAL tool for reading and writing geotiff files
- glue-genes — Multidimensional data visualization for genomics
- graphcompass — Spatial metrics for differential analyses of cell organization across conditions
- graphite-datasets — tensorflow/datasets is a library of datasets ready to use with TensorFlow.
- graphviper — Astro Visibility and Image Parallel Execution Reduction
- greedypy — Fast deformable registration in python
- grunnlag — Basic Schema for interacting with Arnheim through Bergen
- guido — no summary
- gunpowder — A library to facilitate machine learning on large, multi-dimensional images.
- hagelslag — Hagelslag is a Python package for storm-based analysis, forecasting, and evaluation.
- hdfpath — Quick searches of Hierarchical Data Format (HDF)-Files and dict-like data structures based on JSONPath.
- hdmf — A hierarchical data modeling framework for modern science data standards
- hdmf-zarr — A package defining a Zarr I/O backend for HDMF
- histo-patch — histopatch: image patch extraction from Whole Slide Images
- histo-tools — General histology tools.
- histomics_stream — Whole-slide image streamer for machine learning frameworks.
- hpcflow-new — Computational workflow management
- hpcflow-new2 — Computational workflow management
- hub-v1 — Activeloop Hub
- HydroDataset — A Python package for downloading and reading hydrological datasets
- hydromt — HydroMT: Automated and reproducible model building and analysis.
- hypycube — HyPyCube framework
- icclim — Python library for climate indices calculation
- imagej-rolling-ball — Python wrapper for ImageJ's rolling ball background subtraction using pyimagej
- imaris-ims-file-reader — Class for reading Bitplane imaris files (*.ims)
- imaxt-image — IMAXT Image Utilities
- imaxt-mosaic — Image stitching
- imaxt-multiscale-plugin — A simple plugin to use with napari
- imaxt-registration-tools — Image registration tools for IMAXT
- imc2zarr — IMC scan to Zarr conversion
- imjoy-rpc — ImJoy Plugin Engine for running Python plugins locally or remotely from ImJoy.io
- imod — Make massive MODFLOW models!
- impy-array — Speed up coding/extending image analysis in Python.
- imzy — imzy: A new reader interface to imzML and other imaging mass spectrometry formats.
- in-silico-fate-mapping — TODO
- inspectds — no summary
- intake-esm — An intake plugin for parsing an Earth System Model (ESM) catalog and loading netCDF files and/or Zarr stores into Xarray datasets.
- intake-informaticslab — Intake catalogues and associated drivers providing access to hundreds of terabytes of Met Office data.
- intake-xarray — xarray plugins for Intake
- iohub — N-dimensional bioimaging data I/O with OME metadata in Python
- isyntax2raw — iSyntax to raw format converter
- iterseg — napari plugin for iteratively improving unet-watershed segmentation
- itk-dreg — ITK-DREG Distributed registration framework.
- itk-viewer-remote-image — no summary
- itslive — Python client for ITSLIVE gralcier velocity data
- kerchunk — Functions to make reference descriptions for ReferenceFileSystem
- kipoi — Kipoi: model zoo for genomics
- kma-url-api — KMA URL-API
- l5kit — Level-5 Autonomous Vehicle Research library
- labnas — no summary
- lamindb — A data framework for biology.
- large-image-source-tifffile — A tifffile tilesource for large_image.
- large-image-source-zarr — A OME Zarr tilesource for large_image.
- lazy-ops — Lazy slicing and transpose operations for h5py and zarr
- leap-data-management-utils — LEAP / pangeo-forge-recipes extension library for logging data in Google Big Query
- lerobot — Le robot is learning
- lincbrain-cli — Command line client for interaction with LINC Brain archive elements
- lindi — no summary