assemblerflow

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1.1.0.post3

assemblerflow-1.1.0.post3-py3-none-any.whl

Wheel Details

Project:	assemblerflow
Version:	1.1.0.post3
Filename:	assemblerflow-1.1.0.post3-py3-none-any.whl
Download:	[link]
Size:	151044
MD5:	d0f43f314ecacbe17aae7f1e94d70ac8
SHA256:	d5760eb578afdce1a9696a93cd0fb423d6de17868504f908e4a31cc78b16f608
Uploaded:	2018-04-20 15:29:33 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

WHEEL

RECORD

Path	Digest	Size
assemblerflow/__init__.py	sha256=8donh3tylQzBb3w7G1xFxtglTfLciuWeMS_mbUuW6N8	242
assemblerflow/assemblerflow.py	sha256=8HYao8oWfZA_IJE0gEm45zotJmU20qNjgpEc00AaCj0	7648
assemblerflow/nextflow.config	sha256=rgtssCw6PfFyry5V6xVyBF2HV4xdRosFx9gPJfAZswo	2775
assemblerflow/profiles.config	sha256=CraC4B6KhSzjqbx6yQmzn_TwrC408is4rttCOcvgItg	1988
assemblerflow/bin/final_POST.sh	sha256=MVz1MJ6eh5jv0KUGCtLDC_yBUZ5IooKvvQQ9zs0kvKw	365
assemblerflow/bin/merge_json.py	sha256=9_A9vyx4iqa-MqkxJb861LtTi8Hychi0Zoa6cdheZOg	1851
assemblerflow/bin/parse_true_coverage.py	sha256=OAqXA2ujyQjdFk_WT6EuklZvqFNAxNMJArsZJ-UaqGU	1230
assemblerflow/bin/prepare_reports.py	sha256=9oXk4E4Hd31ubnDMXtNJYk7UxI32-70DcIlyjyLJZxM	1151
assemblerflow/bin/report_POST.sh	sha256=jXyuSl-tyzlLQ_IzhhzrAPUAcSCQfDlXFLddL-6hk8M	1545
assemblerflow/bin/set_dotfiles.sh	sha256=7OGRSpsdmC24vo12tQ6MQ43-PYD2gF-NHBAqn-Qt7EE	72
assemblerflow/bin/startup_POST.sh	sha256=OYeHm2wcp8m0SgZUIurnYnU5H-gHeXHxrq3R-Y8gdqY	309
assemblerflow/generator/__init__.py	sha256=IbhuC_xlX67NipvwI278PA3WTQojpiKQAodNYNA_upE	45
assemblerflow/generator/engine.py	sha256=I67qMH9Ed19mzFilk-SIgCfj4PfBPbf4v6uphGDhmuI	50984
assemblerflow/generator/error_handling.py	sha256=ItQlFegnlk7PiBxDQjYaIK2enFVShRCZCEIJY-u_jGY	384
assemblerflow/generator/footer_skeleton.py	sha256=K7M2F29PnrBiNCmrV6W-wYzMZ7SegfVsxwg4AOjKSM0	420
assemblerflow/generator/header_skeleton.py	sha256=n9uufvSkLjCNnW_IcL9530jLqunERfTVwo1iojtho0M	884
assemblerflow/generator/pipeline_parser.py	sha256=4lFeLct3oHLpbygiA2ai3DrhqrRNUsRsN1o1Q-JZJnM	19904
assemblerflow/generator/process.py	sha256=z4OaLYZr3Zg0QnyWKsqQ14DI2roN0RLmsqclA6tmDKs	28993
assemblerflow/generator/process_details.py	sha256=SHACDSQACB4zzcbdMrqZ3Y6B5-rlGispx-W2769O18w	4010
assemblerflow/generator/recipe.py	sha256=b-Likiz17E6pn6R1t1YkfOdf38Ra9FvR219HGyXAp8U	19692
assemblerflow/generator/components/__init__.py	sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU	0
assemblerflow/generator/components/annotation.py	sha256=NNIL5k45ocu-sTYWqDh_UkixcYMY8QmpInGSvVwjgZ8	2308
assemblerflow/generator/components/assembly.py	sha256=GO4Ptxey51G-wJiBtwdgmpzA9V0oCNAGN06uuH20lT4	3875
assemblerflow/generator/components/assembly_processing.py	sha256=MtHR1YmJMo12519JhhvxWTLUl4es-dVuKuy_TWe0h0U	9804
assemblerflow/generator/components/distance_estimation.py	sha256=aZ2gquB7EDCDrUoVHs8K2ch8GMXtUxFkrbBeDthmuwU	3984
assemblerflow/generator/components/downloads.py	sha256=casKe9Zhn_ipg3-aay0bpeN1dbu6JGdsFaaiDFl2a9Y	1134
assemblerflow/generator/components/mapping.py	sha256=agHRuAhsDcx50US9qZubAx6t5NEf2Lh_gqFSZEoKwx4	3663
assemblerflow/generator/components/mlst.py	sha256=WsWq1SOMFhI8RapDnl0qtpueUE8Ay8xsrCxrNyqplxs	5763
assemblerflow/generator/components/reads_quality_control.py	sha256=8__zPxeSKsYMDa_5wARND2t6CYNassA-Y66lSIiCSyI	14988
assemblerflow/generator/components/typing.py	sha256=LWzUfB9WymeFYqPIX4LF5Yq_OSTDnRJaIzp5eeE9zcg	3955
assemblerflow/generator/templates/Helper.groovy	sha256=-sR0ENCvBQMnlJ_2-AdOf0z1wcNdjtFqUF725UqifVg	2258
assemblerflow/generator/templates/abricate.nf	sha256=2YaXRiOmiSOME45BJFjcsQIAQkbbMPQii6ZXWGSdLDs	1019
assemblerflow/generator/templates/assembly_mapping.nf	sha256=G7TJZcF_TKUr8yNB_ypJ6hk7JZIFgnsgNdHBD-whr9I	3164
assemblerflow/generator/templates/check_coverage.nf	sha256=lb2KZSVAzxio-RyzjTr-6efLmof8eZzDej8N9Hjf9cA	1487
assemblerflow/generator/templates/chewbbaca.nf	sha256=ASbmVOvc5xEgMLKErkRRxygxbQE89Mr2l9EBmkaXQ6c	4042
assemblerflow/generator/templates/compiler_channels.txt	sha256=4J4Ri5bEXhEETfCvV6dTZBGeTGz2LH9yr32z47j3fhk	362
assemblerflow/generator/templates/containers.config	sha256=BwogjdzniUVghoFvzavyZi6wOJTi3MpVUJxyPCWQBp0	33
assemblerflow/generator/templates/fastqc.nf	sha256=zwk0VPDY-vJqD3DingfTXHCK7yhGjKh4DDzKohdw_fA	1960
assemblerflow/generator/templates/fastqc_trimmomatic.nf	sha256=iB0b0gcqW0394LZAYxRRKH4EjDxvOEJhMVwCHqO1-1A	3563
assemblerflow/generator/templates/init.nf	sha256=9dvePtgdFO7mtLRTSctA_N2liEq4EldPiP8B0OjYZEY	245
assemblerflow/generator/templates/integrity_coverage.nf	sha256=Qkuv_sPt4fKvcjT8WCz_e9few7BWqQKS1hIJDqhzK0E	2888
assemblerflow/generator/templates/mapping_patlas.nf	sha256=XAPkjLevNCzQi2w_49s1p_OsQTWKyn5BuOaHeKxeP8Q	2430
assemblerflow/generator/templates/mash_dist.nf	sha256=k2NfKJ6ZYKAeKGFVypoEelgt9N1otnBrj0S5pk6EoG4	1279
assemblerflow/generator/templates/mash_screen.nf	sha256=RraabESUgLhN9m0sV3KTXzmN21zYIhc3Ov_6M-CmdgE	1568
assemblerflow/generator/templates/mlst.nf	sha256=DmeqHojgPAO3n3r0F1lNTHUuUqdeeYnC5pftoixZrfY	1478
assemblerflow/generator/templates/params.config	sha256=MusJDpV4D9adYlybgAbtwMtusxE7WKzkbkVzTen6fCs	29
assemblerflow/generator/templates/patho_typing.nf	sha256=JFtxBke1TmsJx0mDMo_dGQ7serCmy99VSMkYyxrTcjA	1189
assemblerflow/generator/templates/patlas_consensus.nf	sha256=HHogYVHV38zMVbIzAbV2D-vVK-yvc3CiwJckHN3VgEI	385
assemblerflow/generator/templates/pilon.nf	sha256=pEB6zpeJ7r5Km5RxQcMB7EbYjk8WtId3EFqNVx2elNc	1979
assemblerflow/generator/templates/pipeline_graph.html	sha256=QsuIAfHuKmiGeeIEbND_oHinvzs6WPZIf3CTV63j0NQ	9123
assemblerflow/generator/templates/post.txt	sha256=6qRvrawPde9wGDLCHBwv7Z_vLqDomhK_zSIEa5uGZbo	655
assemblerflow/generator/templates/process_skesa.nf	sha256=Kq0cK2glXQ_-S5PdqSR80yfMZNwHh5QIcZnzx6bz-74	778
assemblerflow/generator/templates/process_spades.nf	sha256=6ueCM5ZaYshDcVHAS6GXOZhLx2cvChHcPBEasuTta9o	784
assemblerflow/generator/templates/prokka.nf	sha256=u2Q-gKeCcaIb1S6B-M_1WHA71uL3ssxlyDYCzDwtD0M	675
assemblerflow/generator/templates/reads_download.nf	sha256=b0aiFM1RbzrQAMUIYxZU16OVlF3QtZ5XkSzVagINqPg	1211
assemblerflow/generator/templates/report_compiler.nf	sha256=Lel4UUUdNjDw4aTLbniHDhssnDIGKhGwpPfOgGi1J6s	892
assemblerflow/generator/templates/report_post.txt	sha256=UqpyFbiBiK0ry6XGskSVOgpQka0rG4hnhU1E3WRXgiA	500
assemblerflow/generator/templates/resources.config	sha256=i2kMQ1ifuG1q5yR5UQcbuq4c0PwfGgZJW-U72Ihs9qY	31
assemblerflow/generator/templates/seq_typing.nf	sha256=bKaJskO_aIPLcNIDTIqu0P48-9ILQSqGRckjybDB9dQ	1190
assemblerflow/generator/templates/skesa.nf	sha256=1SOSaF36MYbxZB8ehlSwrXp47RMZM5V7di8I5EuEnjM	531
assemblerflow/generator/templates/spades.nf	sha256=aeEqxDnTa4NZSOoOzEU04jVP6h1nNH1ACtGT7Z_8BDM	654
assemblerflow/generator/templates/status_compiler.nf	sha256=Lff1VGHa-ya1hsc0q5c8nCW-g6U06rgLeqP_9IwmZ1w	1165
assemblerflow/generator/templates/trace_compiler.nf	sha256=AQ32B3xzfL5a8F-Q6Vg78EqIitF1ZR9JqKHU2mucVbY	219
assemblerflow/generator/templates/trimmomatic.nf	sha256=6CCfcXKJGeMOZPrjlB2rcs7D872jIjBP2QjjyskxsnU	720
assemblerflow/generator/templates/true_coverage.nf	sha256=K-fnN2wgvlP0X1gCUofvJg3_zSv_FVPDJAx6xXtYUB4	831
assemblerflow/generator/templates/user.config	sha256=5quU1yJqNRIGTkptz6yK9cp_-i-Vgkbbb0uhybchpnU	157
assemblerflow/lib/CheckParams.groovy	sha256=fiOTVYdjM2mRoOXq0xpiibXTFzAKrKgPcxxj2coo5UU	1851
assemblerflow/templates/__init__.py	sha256=E5w5-EvkD4lixgvD5OkBu8z7xIy7MDpQ5Cx3R9dhnyU	48
assemblerflow/templates/assembly_report.py	sha256=n7xbQAAM3LYa73OWWspJi8Wwyo5T9IuUkss9wNzgHsc	14449
assemblerflow/templates/fastqc.py	sha256=tILX-0ToMoA1vxSXM7H6pL11IfX0Cp4RcQ9NZdFWts4	7053
assemblerflow/templates/fastqc_report.py	sha256=jZkcZa6Dy7TS5PxBATptFmABYC4B5U9ERWFTqHzciOM	20756
assemblerflow/templates/integrity_coverage.py	sha256=_iaW0EszGIq2bxjAYRkPw6Ct85O-c-6cEAhWhta_9gg	15365
assemblerflow/templates/mapping2json.py	sha256=1bW8q6TiapVS46H35girDWSk8lOZ4Rs2_MuBa1JvwUo	5081
assemblerflow/templates/mashdist2json.py	sha256=0wtgkPmcxoHFkDbrVOna9pLb1TzTNiwyDOr-QNDhFMQ	3950
assemblerflow/templates/mashscreen2json.py	sha256=emdpy1VcCcv_gddZMZbwUop09vXUtkB06TJFwfMGYiM	3439
assemblerflow/templates/pATLAS_consensus_json.py	sha256=lAhtA7VseXf13LKcfqsZ84_U717LQkVCuNytzX2RWmk	2309
assemblerflow/templates/pipeline_status.py	sha256=TyWGtQzF3To0IOa7G8slXK2QYXntQh2AGDWqRurnwMs	4080
assemblerflow/templates/process_abricate.py	sha256=sjQfGuGSaC12aLK39YDTNyPY4x1j4Xu9AueVuzAC-Y8	14688
assemblerflow/templates/process_assembly.py	sha256=hgyrRFMrR-DlOQxdiMj3M_APNtXS7SKvRIcjNwKBBAM	18611
assemblerflow/templates/process_assembly_mapping.py	sha256=iuhUVlgdvkbyebYOKVyPWjbT3Jvh8l9AvgkM6XSk08w	21023
assemblerflow/templates/skesa.py	sha256=PkdwfiN6sd_lWOi5w2Xw4dOXpgPReK4rTQyht-tl_JM	3462
assemblerflow/templates/spades.py	sha256=V5KPd951lDa21D7LhuEouyved4Xi-dBL3Y_PHg1bsS8	6431
assemblerflow/templates/trimmomatic.py	sha256=oGb3a2rLGJazD7Dp8YdmOBoYYHmph06B6_lpLFZouFI	11400
assemblerflow/templates/trimmomatic_report.py	sha256=0pHBunUiFG_lpegbmZjH94r7EEQuEG0EyhF3QwxFc8k	4770
assemblerflow/templates/assemblerflow_utils/__init__.py	sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU	0
assemblerflow/templates/assemblerflow_utils/assemblerflow_base.py	sha256=K2KAyn7WBF_V6UNcQwwVj4itob-QvVCrKKkybV0QJ8k	3993
assemblerflow-1.1.0.post3.data/data/LICENSE	sha256=jOtLnuWt7d5Hsx6XXB2QxzrSe2sWWh3NgMfFRetluQM	35147
assemblerflow-1.1.0.post3.dist-info/METADATA	sha256=hhBbhN8Oyc22Vu-ME27rjftEz4jwOWIUfJyOzGxFOHQ	10417
assemblerflow-1.1.0.post3.dist-info/RECORD	—	—
assemblerflow-1.1.0.post3.dist-info/WHEEL	sha256=FRuHuBX28RTgsOL603qIpbSc2WeDgbsFBWKj9XFOCpg	92
assemblerflow-1.1.0.post3.dist-info/entry_points.txt	sha256=G37MYxXp45qemtLCpCDbblxGaWWFbU0rsJ_0tWkGxzE	68
assemblerflow-1.1.0.post3.dist-info/top_level.txt	sha256=A-z2gU1dD1sPXXPVyUaQTR1uzEoC7eo9p_ySYSOmsMk	14

top_level.txt

entry_points.txt