cryodrgn

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3.3.0 cryodrgn-3.3.0-py3-none-any.whl

Wheel Details

Project: cryodrgn
Version: 3.3.0
Filename: cryodrgn-3.3.0-py3-none-any.whl
Download: [link]
Size: 1160348
MD5: 7d1d4003d1999a8a4cf801aa8cc3bc2b
SHA256: 2764f2c40cdf50b87d4b178841744c9e6b39f9f042b5b92c091d00d8ce6718c0
Uploaded: 2024-04-30 01:02:53 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: cryodrgn
Version: 3.3.0
Summary: cryoDRGN heterogeneous reconstruction
Author-Email: Ellen Zhong <zhonge[at]princeton.edu>
Project-Url: Homepage, https://github.com/zhonge/cryodrgn
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: POSIX :: Linux
Requires-Python: <3.11,>=3.9
Requires-Dist: torch (>=1.0.0)
Requires-Dist: pandas (<2)
Requires-Dist: numpy (<1.23)
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Requires-Dist: pyyaml
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Requires-Dist: scikit-learn
Requires-Dist: seaborn (<0.12)
Requires-Dist: cufflinks
Requires-Dist: jupyterlab
Requires-Dist: notebook (<7)
Requires-Dist: umap-learn
Requires-Dist: ipywidgets (<8)
Requires-Dist: healpy
Requires-Dist: build; extra == "dev"
Requires-Dist: myst-parser; extra == "dev"
Requires-Dist: pre-commit; extra == "dev"
Requires-Dist: pyright (==1.1.300); extra == "dev"
Requires-Dist: pytest (>=6); extra == "dev"
Requires-Dist: sphinx; extra == "dev"
Requires-Dist: sphinx-rtd-theme; extra == "dev"
Requires-Dist: twine; extra == "dev"
Provides-Extra: dev
Description-Content-Type: text/markdown
License-File: LICENSE.txt
[Description omitted; length: 35034 characters]

WHEEL

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Tag: py3-none-any

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top_level.txt

cryodrgn

entry_points.txt

cryodrgn = cryodrgn.command_line:main_commands
cryodrgn_utils = cryodrgn.command_line:util_commands