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imfusion

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0.3.2 imfusion-0.3.2-py3-none-any.whl
imfusion-0.3.2-py2-none-any.whl

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Project: imfusion
Version: 0.3.2
Filename: imfusion-0.3.2-py3-none-any.whl
Download: [link]
Size: 75562
MD5: 67bd47660e3339b1dfa02648e7de4f92
SHA256: f29629292ce375fc09eadeba6a7548f9fbbe5e582699767650c31282ae8cabcf
Uploaded: 2017-05-11 20:53:32 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.0
Name: imfusion
Version: 0.3.2
Summary: Tool for identifying transposon insertions in Insertional Mutagenesis screens from gene-transposon fusions using single- and paired-end RNA-sequencing data.
Author: Julian de Ruiter
Author-Email: julianderuiter[at]gmail.com
Home-Page: https://github.com/nki-ccb/imfusion
License: MIT license
Requires-Dist: future
Requires-Dist: htseq (>=0.7.2)
Requires-Dist: intervaltree
Requires-Dist: matplotlib
Requires-Dist: numexpr
Requires-Dist: pandas (>=0.19.0)
Requires-Dist: pathlib2
Requires-Dist: pyfaidx
Requires-Dist: pysam (>=0.9.1)
Requires-Dist: scipy
Requires-Dist: seaborn
Requires-Dist: toolz
Requires-Dist: typing
Requires-Dist: rpy2; extra == "de_single"
Requires-Dist: bumpversion; extra == "dev"
Requires-Dist: pytest (>=2.7); extra == "dev"
Requires-Dist: pytest-cov; extra == "dev"
Requires-Dist: pytest-helpers-namespace; extra == "dev"
Requires-Dist: pytest-mock; extra == "dev"
Requires-Dist: python-coveralls; extra == "dev"
Requires-Dist: seaborn; extra == "dev"
Requires-Dist: sphinx; extra == "dev"
Requires-Dist: sphinx-autobuild; extra == "dev"
Requires-Dist: sphinx-rtd-theme; extra == "dev"
Provides-Extra: de_single
Provides-Extra: dev
[Description omitted; length: 3734 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.29.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

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imfusion/main/insertions.py sha256=Rg3gFl-HtI1Q15SxIb__27x-Act7SIinmxyaywr9ja8 1966
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imfusion/util/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
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imfusion/util/genomic.py sha256=Z3JF87zfUJHedimQQaWQtcrthmu1xfwVEfHf_ZfxhgE 2512
imfusion/util/path.py sha256=c-asbKMIWyG9O0jVwFpOjV8BeV5EL7w9WCvANVOVH3I 566
imfusion/util/tabix.py sha256=PkzH7MC9oRRVh6gpPLs9rRY7GFNGyukiF5hwcCZWwH0 9104
imfusion-0.3.2.dist-info/DESCRIPTION.rst sha256=ZuArVeg9Lee0dEgVW3tV-Mga4uB0tu_FYBe7gujNsjI 3734
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top_level.txt

imfusion

entry_points.txt

[console_scripts]
imfusion = imfusion.main.dispatch:main
imfusion-build = imfusion.main.build:main
imfusion-ctg = imfusion.main.ctg:main
imfusion-expression = imfusion.main.expression:main
imfusion-insertions = imfusion.main.insertions:main
imfusion-merge = imfusion.main.merge:main