looper

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1.7.0 looper-1.7.0-py3-none-any.whl

Wheel Details

Project: looper
Version: 1.7.0
Filename: looper-1.7.0-py3-none-any.whl
Download: [link]
Size: 103558
MD5: fc8ee97832137731ff32d8450e13c378
SHA256: be4d19bf64b05f2f58c8823468237f1c9e54f5bdbf3989700e15ad476aaec3cc
Uploaded: 2024-01-26 14:45:17 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: looper
Version: 1.7.0
Summary: A pipeline submission engine that parses sample inputs and submits pipelines for each sample.
Author: Nathan Sheffield, Vince Reuter, Michal Stolarczyk, Johanna Klughammer, Andre Rendeiro
Home-Page: https://github.com/pepkit/looper
License: BSD2
Keywords: bioinformatics,sequencing,ngs
Classifier: Development Status :: 4 - Beta
Classifier: License :: OSI Approved :: BSD License
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Dist: colorama (>=0.3.9)
Requires-Dist: divvy (>=0.5.0)
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Requires-Dist: jinja2
Requires-Dist: logmuse (>=0.2.0)
Requires-Dist: pandas (>=2.0.2)
Requires-Dist: pephubclient (>=0.1.2)
Requires-Dist: peppy (>=0.40.0)
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Requires-Dist: pyyaml (>=3.12)
Requires-Dist: rich (>=9.10.0)
Requires-Dist: ubiquerg (>=0.5.2)
Requires-Dist: yacman (>=0.9.2)
Description-Content-Type: text/markdown
License-File: LICENSE.txt
[Description omitted; length: 572 characters]

WHEEL

Wheel-Version: 1.0
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Tag: py3-none-any

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top_level.txt

looper

entry_points.txt

divvy = looper.__main__:divvy_main
looper = looper.__main__:main