pyim

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0.2.1 pyim-0.2.1-py3-none-any.whl

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Project: pyim
Version: 0.2.1
Filename: pyim-0.2.1-py3-none-any.whl
Download: [link]
Size: 45797
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Uploaded: 2017-06-08 08:17:08 +0000

dist-info

METADATA

Metadata-Version: 2.0
Name: pyim
Version: 0.2.1
Summary: Tool for identifying transposon insertions from targeted DNA-sequencing data.
Author: Julian de Ruiter
Author-Email: julianderuiter[at]gmail.com
Home-Page: https://github.com/jrderuiter/pyim
License: MIT license
Keywords: pyim
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Requires-Dist: cutadapt (>=1.8)
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Requires-Dist: natsort
Requires-Dist: numpy
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Requires-Dist: sphinx; extra == "dev"
Requires-Dist: sphinx-autobuild; extra == "dev"
Requires-Dist: sphinx-rtd-theme; extra == "dev"
Provides-Extra: dev
[Description omitted; length: 1040 characters]

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top_level.txt

pyim

entry_points.txt

pyim-align = pyim.main.pyim_align:main
pyim-annotate = pyim.main.pyim_annotate:main
pyim-bed = pyim.main.pyim_bed:main
pyim-cis = pyim.main.pyim_cis:main
pyim-demultiplex = pyim.main.pyim_demultiplex:main
pyim-merge = pyim.main.pyim_merge:main
pyim-split = pyim.main.pyim_split:main