recOrder-napari

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0.4.1 recOrder_napari-0.4.1-py3-none-any.whl
0.1.0b2 recOrder_napari-0.1.0b2-py3-none-any.whl

Wheel Details

Project: recOrder-napari
Version: 0.1.0b2
Filename: recOrder_napari-0.1.0b2-py3-none-any.whl
Download: [link]
Size: 411914
MD5: 415d5ef3d9b2ba10a8040cafee25d001
SHA256: 373bb0b9ae2228e18c5060feddf333d77fed9bcd1d2858d5a5cb3566795acbbb
Uploaded: 2022-04-19 19:14:03 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: recOrder-napari
Version: 0.1.0b2
Summary: Computational microscopy toolkit for label-free imaging
Author: Computational Microscopy Platform, CZ Biohub
Author-Email: shalin.mehta[at]czbiohub.org
Home-Page: https://github.com/mehta-lab/recOrder
Project-Url: Bug Tracker, https://github.com/mehta-lab/recOrder/issues
Project-Url: Documentation, https://github.com/mehta-lab/recOrder/wiki
Project-Url: Source Code, https://github.com/mehta-lab/recOrder/tree/main/recOrder
Project-Url: User Support, https://github.com/mehta-lab/recOrder/issues
License: Chan Zuckerberg Biohub Software License
Classifier: License :: OSI Approved :: BSD License
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Visualization
Classifier: Topic :: Scientific/Engineering :: Information Analysis
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Utilities
Classifier: Framework :: napari
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX
Classifier: Operating System :: Unix
Classifier: Operating System :: MacOS
Requires-Python: >=3.7
Requires-Dist: numpy (>=1.17.4)
Requires-Dist: scipy (>=1.3.0)
Requires-Dist: matplotlib (>=3.4.3)
Requires-Dist: zarr (>=2.6.1)
Requires-Dist: click (>=8.0.1)
Requires-Dist: pyyaml (>=5.4.1)
Requires-Dist: PyWavelets (>=1.1.1)
Requires-Dist: waveorder (>=1.0.0b0)
Requires-Dist: pycromanager (>=0.17)
Requires-Dist: tqdm (>=4.61.1)
Requires-Dist: opencv-python (>=4.5.3.56)
Requires-Dist: natsort (>=7.1.1)
Requires-Dist: colorspacious (>=1.1.2)
Requires-Dist: pyqtgraph (>=0.12.3)
Requires-Dist: superqt (>=0.2.4)
Requires-Dist: napari-ome-zarr (>=0.3.2)
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 6822 characters]

WHEEL

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recOrder_napari-0.1.0b2.dist-info/RECORD

top_level.txt

examples
recOrder

entry_points.txt

recOrder.convert = recOrder.scripts.convert_tiff_to_zarr:main
recOrder.help = recOrder.scripts.help:main
recOrder.reconstruct = recOrder.scripts.run_pipeline:main
recOrder = recOrder:napari.yaml