Reverse Dependencies of toytree
The following projects have a declared dependency on toytree:
- ab12phylo — Integrated pipeline for ML phylogenetic inference from ABI trace and FASTA data
- BacDiving — Bacdiving accesses the Bacterial Diversity Metadatabase BacDive and provides various visualization options.
- cldfviz — A cldfbench plugin to create vizualisations of CLDF datasets
- gene-cluster-matrix — Visualization library for gene cluster & distance
- gramep — GRAMEP - Genome vaRiation Analysis from the Maximum Entropy Principle
- pertpy — Perturbation Analysis in the scverse ecosystem.
- PG-SUI — Python machine and deep learning package to impute missing SNPs
- snpio — Reads and writes VCF, PHYLIP, and STRUCTURE files and performs data filtering on the alignment.
- tascCODA — Tree-aggregated compositional analysis for high-throughput sequencing data
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