| Path |
Digest |
Size |
| README.md |
sha256=0uxO6Rbd31UOHgU5U0z3DRRIS5K7gbyEVR8ixxSQC7g
|
2686 |
| cg/__init__.py |
sha256=eYT5bmogm_lkdKy9TW6Rg9ep5I57F_wB_td29897slw
|
40 |
| cg/apps/__init__.py |
sha256=pYf0vxo4iYQqURzFRYzqpOCdV8Cm9MWx0GHvJOz0EMg
|
315 |
| cg/apps/coverage/__init__.py |
sha256=dJtsmNf8tODE2-VEomMIoYA7ugLYZAk_upsfOQCZeF8
|
27 |
| cg/apps/coverage/api.py |
sha256=e_ozC3QeNKoEfpjjMaL-XjeBLtz-JySWccrtw0E9mLM
|
2940 |
| cg/apps/crunchy/__init__.py |
sha256=wqpS8FrCNUnMTeaVxhw0Plq7gv0DGTVojGIyJlEUPeU
|
56 |
| cg/apps/crunchy/crunchy.py |
sha256=3HN-zKE1Io4xcM8scb1RV1F6JH6Q0FYWn1CwOiHUvXI
|
12783 |
| cg/apps/crunchy/files.py |
sha256=ojRzyEE2EhNg0TMfxduvZU6gL9fasef8m61J0GegMUo
|
4502 |
| cg/apps/crunchy/models.py |
sha256=MOSMFmZ3u1ShUAIy2t229VUsE-5RCo1Z3ZBCZWIdAgM
|
430 |
| cg/apps/crunchy/sbatch.py |
sha256=6TLFsj6ARPA4M8TTBYONqHmIk6RygsGvLDdPETMJwNc
|
910 |
| cg/apps/demultiplex/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/apps/demultiplex/demultiplex_api.py |
sha256=lw28gW25ItRrl-42evi5a12bMsZeHRoa9gREZvi-lU8
|
11299 |
| cg/apps/demultiplex/sample_sheet/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/apps/demultiplex/sample_sheet/api.py |
sha256=bDhcva0JFG0OdZPLdfQz93NriyWIstV1Ml-QRazs8Zo
|
11227 |
| cg/apps/demultiplex/sample_sheet/index.py |
sha256=7bx8CZe2A1Hd1YL9JrWkNwRGylVYCJGdVcwKDC1VWCI
|
2183 |
| cg/apps/demultiplex/sample_sheet/override_cycles_validator.py |
sha256=6KliZ--0cjDJWQ3itBpiD28CpA9Z74E08deIVxOWpa4
|
7341 |
| cg/apps/demultiplex/sample_sheet/read_sample_sheet.py |
sha256=XHE7UOjLWOYVKzsM9HzcAT3vG92NSdwyoDmBLQTVNiA
|
3188 |
| cg/apps/demultiplex/sample_sheet/sample_models.py |
sha256=IuQJ-3LPBhGI90f3Lnl9Lpr9OGOqsQL1bM9AgSXYfR4
|
7071 |
| cg/apps/demultiplex/sample_sheet/sample_sheet_creator.py |
sha256=etN4Yif0pg8IQLksw0aMa-nILIisDaPCVp24MG2Qo1U
|
6076 |
| cg/apps/demultiplex/sample_sheet/sample_sheet_models.py |
sha256=B-_9eeIlXPCo5oyck5T1ujvOcm1ZuG7J5pA-rhYwNXA
|
1372 |
| cg/apps/demultiplex/sample_sheet/sample_sheet_validator.py |
sha256=pfOOARpC_W8cggw8UzutxRHPo78DYQlk0l9BEaWD9so
|
8092 |
| cg/apps/demultiplex/sample_sheet/validators.py |
sha256=SF4Ys-lVCe9Gtbt5P9fEL-hbesLsIF7Lh1Fk-hkzsrM
|
824 |
| cg/apps/demultiplex/sbatch.py |
sha256=x7psttZ7PB8lYY6gAvj51cfe-d57weAUTOCjr88usv8
|
677 |
| cg/apps/downsample/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/apps/downsample/downsample.py |
sha256=X6ndaMmJ6oK0L1RAHrzjplwh5i-mw0F9LSsqyBJYs04
|
6160 |
| cg/apps/downsample/utils.py |
sha256=zgp14Z4mfg1g1XxqEUF2sfnFUrmPuOqVEJBwmX_HVSc
|
2125 |
| cg/apps/environ.py |
sha256=TKJb36n3swrKRsaBOilKobRp9eFfZZBZfiD3z7YYBcU
|
298 |
| cg/apps/gens.py |
sha256=raEAAhLaz1GZVl8jiZ5kE05xbNdCb24YTVW6jM01dyY
|
1741 |
| cg/apps/gt.py |
sha256=h6qSHMKrVHoi46J-Uq8NbN46U7YfpPFEowCrzRd4spU
|
3419 |
| cg/apps/hermes/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/apps/hermes/hermes_api.py |
sha256=IAVa6izjnGRa-rJB_dDkr_9NUhJhUT1GfkOqPMPXzPk
|
2249 |
| cg/apps/hermes/models.py |
sha256=sbutAX_bNCbh-hLwnpjqV01rq3AdbJel-NcGOBiCJAw
|
1298 |
| cg/apps/housekeeper/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/apps/housekeeper/hk.py |
sha256=3-4DKrZQGWtZ5vrXDqwa5p96JPdmlzdtRDOrErVn2zw
|
30395 |
| cg/apps/housekeeper/models.py |
sha256=rmR_8QHESsWkn5hbqnRtAtVje_M7YK33YkdG781KIY0
|
326 |
| cg/apps/invoice/__init__.py |
sha256=1YWal0E1HPO5sdLOj9_JUwL_17Z2DSj7iJV5kEd8Q-4
|
32 |
| cg/apps/invoice/render.py |
sha256=OpuNkajrv5Qx1DZDnjVlTSLN4CkaS3eMtsPmPELL3HU
|
4804 |
| cg/apps/invoice/templates/KI_pool_invoice.xlsx |
sha256=sAYj93WSHxH5e7eRCh8vBJI3_tqoXAGF03EBO1gO2pI
|
113467 |
| cg/apps/invoice/templates/KI_sample_invoice.xlsx |
sha256=Y_HWBEOjTlQNRZ0jCgkBINBvfXiIQikPYB842W0rsa0
|
75562 |
| cg/apps/invoice/templates/KTH_pool_invoice.xlsx |
sha256=uXtncQbplqHgiQNwgmuQM7EMe6Iw6dGM8d69ng1h3fA
|
113512 |
| cg/apps/invoice/templates/KTH_sample_invoice.xlsx |
sha256=gyrzYhPv4DKjUx3QIpyxq0-jl2ZZFaiCHjhiDxRU8HA
|
75459 |
| cg/apps/lims/__init__.py |
sha256=7j5PAibFkYnUTO9Cvvv8IMy_Fg-i88N7VqOs_eAduhE
|
25 |
| cg/apps/lims/api.py |
sha256=yo6nWXtCfsm3LPkQWYk2pUgmXeRJ3SFj_zIIT74PM54
|
18873 |
| cg/apps/lims/batch.py |
sha256=7T6shTaQukT8f3ZZgOk0DXj9KO3sb4FicWBulqARuqM
|
2652 |
| cg/apps/lims/order.py |
sha256=wAVmAHWJRGX8uXLK-enfphuT34nekw0OtRd5SvpRRAo
|
8129 |
| cg/apps/lims/sample_sheet.py |
sha256=jZEexm7CSLS67cUjbfGnRcrrU_Ois6fOk71USmO_Hwo
|
3118 |
| cg/apps/loqus.py |
sha256=PLqB91lxXefM9EN5v8lQCykrB3V8cfbDtcBHPJT4UPo
|
4866 |
| cg/apps/madeline/__init__.py |
sha256=0vEgTYFvpWxfqaU1Fl8oJONqIxzi7eqnMVApkgFo0Fk
|
35 |
| cg/apps/madeline/api.py |
sha256=PyjOX0wLk7pZWCUajpsA844wqCOw0fQfTEyNp_innS0
|
3213 |
| cg/apps/mip/__init__.py |
sha256=l3TyXnP7G_lS_NVR828bCgR2McKUzyXBFoaPCy_Yl44
|
23 |
| cg/apps/mip/confighandler.py |
sha256=V6eljnzbekQ4M98P8npVI8McPvbIN6z7DRo19Yo2c4Q
|
3564 |
| cg/apps/mutacc_auto.py |
sha256=KRQRXP5yI_LTaBFnjLCXAGrhiAUna9eOPAHhiKbhDfk
|
2207 |
| cg/apps/orderform/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/apps/orderform/excel_orderform_parser.py |
sha256=Rg8bPQ7uxv-G2wgaoF3lvTgor93335SMMZZsmPFj_iA
|
9498 |
| cg/apps/orderform/json_orderform_parser.py |
sha256=iQLAhLB4qtQewmUCBoWhfYyPT04rxOGIkDXRUA_NrZ4
|
3051 |
| cg/apps/orderform/orderform_parser.py |
sha256=Cwm45EzxPe8WpxgNcL08qPral-Uc_toqqr5ny4BTG90
|
6419 |
| cg/apps/orderform/utils.py |
sha256=knR20e40uzhMtfKNm6JZBx-f9p7D75cE-mcN1XRIwk8
|
252 |
| cg/apps/osticket.py |
sha256=2V3l_9tDhGFCxnriN5kNSWNe9cbL7mAvWdfHuXKeYCg
|
2537 |
| cg/apps/scout/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/apps/scout/scout_export.py |
sha256=UbKEgDAtsqZxC2ewlLygq8ZEwyJ4x_hvWxMEbSqE5gQ
|
3177 |
| cg/apps/scout/scoutapi.py |
sha256=L2SFrWpT4T3zD7y76RI8OP3ctSRiNW-OaXiKdW5j30A
|
11108 |
| cg/apps/scout/validators.py |
sha256=GoRbUe896sDs9SO3rhlCOxZEA58rZWxE_QaC7jXUilE
|
444 |
| cg/apps/sequencing_metrics_parser/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/apps/sequencing_metrics_parser/api.py |
sha256=-GRTnP3jbqrgXY0eiCXB99QDl_HACnUhbpxuihIOcZo
|
3457 |
| cg/apps/sequencing_metrics_parser/models.py |
sha256=ZkMF7vPdiqwxj4HBiAAmCc63_ZbtUgS1XozoH8-wzdw
|
923 |
| cg/apps/sequencing_metrics_parser/parser.py |
sha256=_t7jYfnU2la-SIbkLv0BVgrPBLg5vHMhXsNjwA6WGVU
|
6658 |
| cg/apps/slurm/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/apps/slurm/sbatch.py |
sha256=UCbUo6TipX7uVECttTDiokRiNq_qPPOdUSHQGQrIwhQ
|
1277 |
| cg/apps/slurm/slurm_api.py |
sha256=mAUF7uyTBc-36-tOe3iZXuDNXaghwbMoMZw2KXlwVb0
|
3559 |
| cg/apps/tb/__init__.py |
sha256=qHZbz8gBX_o2KU3DLHccCN2CuedR6_IJlELAnv9oEBs
|
32 |
| cg/apps/tb/api.py |
sha256=BxylB4OFxQBRh2ny8dF9c8rDWrvA5gGBrKCYMofmPaA
|
7995 |
| cg/apps/tb/dto/create_job_request.py |
sha256=ZTL491KYxBQu_nXxcl6hpuSsbM9mufjmWtE62_0RAL8
|
152 |
| cg/apps/tb/dto/summary_response.py |
sha256=tqy67S3yYZbU5DLQ3BsFuUoLGET0Bk7iwo1GAnydzuI
|
250 |
| cg/apps/tb/models.py |
sha256=I88cKRuBns3dD2eFmPccRrk1eSQysbi9u3UYTWLjnOw
|
1305 |
| cg/apps/tb/validators.py |
sha256=E_7_grCEf7lTOj37XKwYl1y1h0Zj__FohJNeV5nGgt0
|
305 |
| cg/cli/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/cli/add.py |
sha256=KfuOoOOP9ppud-iJF5m2OCyPo1Vw1sIZZP8NzdKfDCo
|
11558 |
| cg/cli/archive.py |
sha256=eITN_VPfaB-i0wvvzH3IRK-ylpyWWI6ZSf607n-XxM4
|
2653 |
| cg/cli/backup.py |
sha256=CZmWW0TzzVURQ_rMNTt8EOZ43VSfVMvCY1p7aneJ1y0
|
10118 |
| cg/cli/base.py |
sha256=_htF8UvGIk8KpKJ29uJec6J0LQnN08Vb0uLTCWeKixE
|
3852 |
| cg/cli/clean.py |
sha256=Skjp7BUj320ivknDA-CEd7DN-k0xcJIdtsHfwYNOUFw
|
10506 |
| cg/cli/compress/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/cli/compress/base.py |
sha256=FxxAa49QkjvVaqTESOwA93zmWUAItQXtE94HOvkwQ_w
|
2135 |
| cg/cli/compress/fastq.py |
sha256=Zsoby3B-q5Y3jB3k_ReET4LkIFwny-OuGIY4BBqRMmQ
|
6706 |
| cg/cli/compress/helpers.py |
sha256=r-xrCamWwzAmbaWcDsnlcGIeEOAsCyIDz4CkiQ6dbcI
|
8163 |
| cg/cli/delete/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
| cg/cli/delete/base.py |
sha256=sTJ0kvO1nu3hNXj6HUZk8jAsN6R5AT6jdaGHOuHriB4
|
564 |
| cg/cli/delete/case.py |
sha256=N6oyIUESZnviNqbWuj0o6HoqQU8L9KAvmAWQsjeeSDM
|
4603 |
| cg/cli/delete/cases.py |
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|
1884 |
| cg/cli/delete/observations.py |
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2633 |
| cg/cli/deliver/__init__.py |
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0 |
| cg/cli/deliver/base.py |
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6030 |
| cg/cli/demultiplex/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
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0 |
| cg/cli/demultiplex/base.py |
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829 |
| cg/cli/demultiplex/copy_novaseqx_demultiplex_data.py |
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|
4905 |
| cg/cli/demultiplex/demux.py |
sha256=Vrxvv6leWMpC6WXdJnx6g9slzao8b0yMI82Br4Qqye4
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7726 |
| cg/cli/demultiplex/finish.py |
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|
1473 |
| cg/cli/demultiplex/sample_sheet.py |
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|
3119 |
| cg/cli/downsample.py |
sha256=zffOwktWgjF9rD0gz5IAPOF-879DQq5CEVS3iqC-idI
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2995 |
| cg/cli/generate/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
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0 |
| cg/cli/generate/base.py |
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356 |
| cg/cli/generate/report/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
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| cg/cli/generate/report/base.py |
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4636 |
| cg/cli/generate/report/options.py |
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854 |
| cg/cli/generate/report/utils.py |
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5340 |
| cg/cli/get.py |
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8327 |
| cg/cli/set/__init__.py |
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0 |
| cg/cli/set/base.py |
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9856 |
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4384 |
| cg/cli/set/cases.py |
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2595 |
| cg/cli/store/__init__.py |
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| cg/cli/store/base.py |
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1093 |
| cg/cli/store/store.py |
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6191 |
| cg/cli/transfer.py |
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1761 |
| cg/cli/upload/__init__.py |
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1 |
| cg/cli/upload/base.py |
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5706 |
| cg/cli/upload/clinical_delivery.py |
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5503 |
| cg/cli/upload/coverage.py |
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1175 |
| cg/cli/upload/delivery_report.py |
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1528 |
| cg/cli/upload/fohm.py |
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4022 |
| cg/cli/upload/genotype.py |
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1463 |
| cg/cli/upload/gens.py |
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1885 |
| cg/cli/upload/gisaid.py |
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584 |
| cg/cli/upload/mutacc.py |
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|
2645 |
| cg/cli/upload/nipt/__init__.py |
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23 |
| cg/cli/upload/nipt/base.py |
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3006 |
| cg/cli/upload/nipt/ftp.py |
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2275 |
| cg/cli/upload/nipt/statina.py |
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1596 |
| cg/cli/upload/observations/__init__.py |
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| cg/cli/upload/observations/observations.py |
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2672 |
| cg/cli/upload/observations/utils.py |
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2904 |
| cg/cli/upload/scout.py |
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9970 |
| cg/cli/upload/utils.py |
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2775 |
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|
2366 |
| cg-60.4.3.dist-info/METADATA |
sha256=RQoDxgubNDpHRBaZD9GVpZ1BEI7sgoiAxxpLHKwDUdE
|
4369 |
| cg-60.4.3.dist-info/WHEEL |
sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg
|
88 |
| cg-60.4.3.dist-info/entry_points.txt |
sha256=q5f47YQQGltzK_xnIq1mDopRXXEItr85Xe1BCtG-Wts
|
39 |
| cg-60.4.3.dist-info/RECORD |
— |
— |